Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 2e-11 seq1 84.2 2e-11 >seq6 Length=36610139 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| |||||||| | |||| ||||| || |||||||| || | Sbjct 2880056 ACATGAGCAATCATGCATGTTAAAAGCGCATAGGATGCAATATTGAATGGCACGCCAAGA 2879997 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCAT 101861 ||||||||||| || | || |||| ||||| || | || |||| Sbjct 2879996 CCCATATCAGCAGAGCGCTGGTACATCTGACAAGATAACTCGCCAT 2879951 >seq1 Length=51465339 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| || ||||| | ||| |||||||| ||||| || || | Sbjct 41028893 ACATGAGCAATCATGCATGTCAAAAGTGCATATGATGCAATGTTGAATGGAACACCGAGA 41028834 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCAT 101861 ||||||||||| || | ||||||| |||||| || | || |||| Sbjct 41028833 CCCATATCAGCAGAGCGCTGATACATTTGACAAGATAACTCGCCAT 41028788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361229952333326