Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq6 120 3e-22 seq1 116 3e-21 seq2 114 1e-20 seq3 113 4e-20 seq7 111 1e-19 seq15 89.7 4e-13 >seq6 Length=36610139 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | |||||||| ||| | || || ||||| || || || ||||| | Sbjct 34079354 TTCCACCACGTAGACGGAGCACCAAATGAAGGGTTGATTCCTTCTGGATATTGTAGTCAG 34079295 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | ||||| | |||| |||||||| ||||| ||| |||| |||||||||||||| || Sbjct 34079294 CAAGGGTGCGACCGTCTTCCAGCTGCTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGGG 34079235 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||| |||||||| |||||| ||| || | | | ||| ||| | || Sbjct 34079234 GGATGCCCTCCTTGTCCTGGATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCAA 34079175 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | ||| || |||||||| || | || || |||||||| ||||| Sbjct 34079174 CTTCTAGGGTGATTGTCTTGCCAGTAAGTGTCTTAACAAATATCTGCAT 34079126 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||| | || || ||||| || ||||| ||||| || Sbjct 34641800 CCACCACGTAGACGGAGCACCAAATGAAGGGTCGATTCCTTCTGGATGTTGTAGTCAGCA 34641741 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | |||| |||||||| ||||| ||| |||| |||||||||||||| ||| Sbjct 34641740 AGGGTGCGACCGTCTTCCAGCTGCTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGGGGG 34641681 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||| || | | | ||| ||| | || | Sbjct 34641680 ATGCCCTCCTTGTCCTGGATCTTAGCTTTAACATTATCAATAGTGTCAGAGCTTTCAACT 34641621 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||| || || | || || ||||| || ||||| Sbjct 34641620 TCTAGGGTGATGGTCTTTCCAGTAAGTGTCTTAACAAAGATCTGCAT 34641574 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||||| ||| | || |||||||| || ||||||||||| || Sbjct 34407214 CCACCACGCAGGCGGAGCACCAAATGAAGGGTTGACTCCTTCTGGATGTTATAGTCAGCA 34407155 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || |||| || ||||| || || ||| ||||||| |||||||||||| || Sbjct 34407154 AGAGTACGGCCGTCTTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCCGGTGGG 34407095 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || ||||| || ||||| ||| || | | | ||| ||| | || | Sbjct 34407094 ATACCCTCCTTATCCTGAATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCAACT 34407035 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | |||||| ||||| || || | || || ||||| || ||||| Sbjct 34407034 TCTAAGGTAATAGTCTTTCCAGTAAGGGTCTTAACAAAAATCTGCAT 34406988 Score = 105 bits (116), Expect = 6e-18 Identities = 163/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || | |||||| || |||| ||| | ||||| ||||| ||||| || || || | Sbjct 34407444 TTCCACCCCTCAGCCTCAGTACCAAATGGAGTGTGGATTCCTTCTGAATATTGTAATCAG 34407385 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||| || | ||||||| ||| ||||| ||| |||| | |||||||||||| || Sbjct 34407384 CCAATGTCCTTCCATCCTCCAACTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGG 34407325 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGC--TC 21124 | | ||||||||||| ||| ||| ||||| | | | | |||| ||| | || Sbjct 34407324 GGATTCCTTCCTTGTCTTGGATTTTTGCCTTCACATTGTCAATTGTAT--CCGAACTTTC 34407267 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | ||| || ||||| || || | || |||||||| |||||||| Sbjct 34407266 TACTTCAAGGGTGATTGTCTTCCCTGTGAGGGTCTTGACAAAGATTTGCAT 34407216 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | |||||| | ||| | || ||||| |||||||| || ||||| | Sbjct 34642258 TTCCACCACGGAGACGGAGCACAAGATGAAGGGTAGACTCTTTTTGAATATTGTAGTCTG 34642199 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | || || || | || || || ||||| || ||| | ||||| ||||||||||| | Sbjct 34642198 CAAGTGTGCGGCCATCTTCAAGTTGTTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTG 34642139 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||| |||||||| |||||| ||| || | | | ||| ||| | |||| Sbjct 34642138 GGATGCCCTCCTTGTCTTGAATCTTTGCTTTGACATTATCAATAGTGTCAGAGCTCTCCA 34642079 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | || |||||||| || || || || || ||||| || |||||| Sbjct 34642078 CCTCTAGCGTGATGGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCATT 34642029 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || | |||||| | |||| ||| | ||||| |||||||||||||| || || | Sbjct 34642030 TTCCACCCCTCAGCCTCAATACCAAATGAAGTGTGGATTCCTTTTGAATGTTGTAATCTG 34641971 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||| || ||||||||| ||| || || ||| | || | |||||||| || | Sbjct 34641970 CCAATGTCCTTCCGTCCTCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGATCTGGAG 34641911 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || || ||||| ||||||| || || | | | | |||||| | ||| Sbjct 34641910 GAATTCCCTCTTTGTCTTGGATCTTTGCCTTAACATTGTCAATTGTATCAGAGCTCTCTA 34641851 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| |||||| ||||| || || | ||| |||||||| |||||||| Sbjct 34641850 CCTCCAAGGTAATTGTCTTTCCAGTAAGCGTCTTGACAAAGATTTGCAT 34641802 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| ||| | ||||| ||||| ||||| |||||||| || | || | ||| Sbjct 34406743 AGAACCAAATGAAGGGTGGATTCCTTCTGAATATTATAGTCAGCTAAAGTCCTTCCATCC 34406684 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||||||||||||| | ||||| |||||||| || || | |||||||||||| Sbjct 34406683 TCGAGCTGTTTGCCCGCAAAGATAAGCCTCTGCTGATCGGGAGGGATGCCTTCCTTGTCT 34406624 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||| || || | | ||| || ||| | || || | ||| |||||| Sbjct 34406623 TGAATCTTAGCCTTGACATTGTCGATTGTGTCAGAGCTTTCAACCTCAAGGGTTATGGTC 34406564 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || ||||| | ||||| ||||| || ||||| Sbjct 34406563 TTTCCGGTAAGAGTTTTCACAAAGATCTGCAT 34406532 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||| || || | |||||| | ||| | || ||||| |||||||| || ||||| || Sbjct 34079808 CCCCCACGGAGACGGAGCACAAGATGGAGGGTAGACTCTTTTTGAATATTGTAGTCTGCA 34079749 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | || || || ||||| || ||| | ||||| ||||||||||| || Sbjct 34079748 AGTGTGCGGCCATCTTCAAGTTGTTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGG 34079689 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| || ||||| |||||| ||| || | | | ||| || | |||| Sbjct 34079688 ATGCCCTCTTTGTCTTGAATCTTTGCTTTGACATTATCAATAGTGTCGGAGCTCTCCACC 34079629 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | || |||||||| || || || || || ||||| || |||||| Sbjct 34079628 TCTAGCGTGATGGTCTTTCCTGTCAAAGTCTTCACAAAAATCTGCATT 34079581 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| ||| | ||||| ||||| ||||| || || || || | || | | ||| Sbjct 34406971 AGAACCAGATGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCTAATGTACGACCATCC 34406912 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || |||||||||||||| | ||||| |||||||| || || | |||||||||||| Sbjct 34406911 TCAAGCTGTTTGCCCGCGAAGATAAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCC 34406852 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||| || || | | | | || ||| | || ||| | |||||||||| Sbjct 34406851 TGAATCTTAGCCTTAACATTGTCAATGGTGTCAGAGCTTTCAACTTCTAAGGTAATGGTC 34406792 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || | ||||| ||||| || ||||| Sbjct 34406791 TTGCCAGTGAGTGTTTTAACAAAGATCTGCAT 34406760 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| ||||||||| | ||||||| ||| || || Sbjct 34080006 GTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTTCTTCCATCCTCCAACTGCTTTCCA 34079947 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| |||| | | ||| || || || | || || ||||| ||| || ||| Sbjct 34079946 GCAAAAATCAAACGCTGTTGATCTGGTGGGATTCCCTCTTTGTCCTGGATTTTCGCCTTC 34079887 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | ||||| | ||| |||| ||| |||||||||||||| || || Sbjct 34079886 ACGTTATCAATTGTATCTGAGCTCTCAACCTCCAAGGTGATGGTCTTGCCGGTCAATGTC 34079827 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| |||||||| Sbjct 34079826 TTCACAAAGATTTGCAT 34079810 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || | |||||||| || | || || || || ||||| || ||||| || Sbjct 34407670 CCACCTCTAAGACGGAGCACCAAGTGGAGGGTAGATTCTTTCTGAATATTGTAGTCAGCA 34407611 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||| ||||| || || ||| |||| || ||||||||||| || Sbjct 34407610 AGGGTACGACCATCCTCAAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGG 34407551 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||| || || || ||| ||||| | | | || || | |||| Sbjct 34407550 ATGCCTTCTTTATCCTGAATTTTTGCCTTCACATTATCAATTGTGTCTGAGCTCTCCACC 34407491 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| ||||| ||||| || || || || || ||||| || |||||| Sbjct 34407490 TCCAAAGTAATTGTCTTTCCTGTCAATGTCTTCACAAAAATCTGCATT 34407443 >seq1 Length=51465339 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| |||| || | |||||||||||| || ||||||||||| || Sbjct 45561015 CCACCACGGAGCCTGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCAGCA 45560956 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||||||| || || ||| | || | ||||||||||| ||| Sbjct 45560955 AGGGTCCTTCCATCCTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGA 45560896 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | | ||| |||||| | ||| Sbjct 45560895 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTATCAGAGCTCTCGACC 45560836 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||| || || || || ||||| || || ||||| Sbjct 45560835 TCAAGGGTGATTGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 45560789 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| |||| || | ||| |||||||| || ||||| ||||| || Sbjct 45560787 CCACCACGGAGCCTGAGGACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCA 45560728 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||| ||||| || || ||| | || | ||||||||||| ||| Sbjct 45560727 AGGGTCCTGCCATCCTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGA 45560668 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || || | | ||| || ||| | ||| | Sbjct 45560667 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCAGAGCTCTCGACT 45560608 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||| || || || || ||||| || || ||||| Sbjct 45560607 TCAAGGGTGATGGTCTTCCCTGTCAAAGTCTTGACGAAGATCTGCAT 45560561 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| ||| | ||| |||||||| || || || ||||| || Sbjct 45560559 CCACCACGAAGACGGAGGACCAAATGGAGAGTTGACTCCTTCTGGATATTGTAGTCGGCA 45560500 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | |||| || || || ||||| || | || | ||||||||||| ||| Sbjct 45560499 AGGGTCCTGCCGTCTTCAAGTTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGA 45560440 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||| || ||| || || || | | ||| || || | || Sbjct 45560439 ATGCCTTCCTTATCCTGGATTTTGGCCTTGACGTTGTCGATTGTGTCGGAGCTTTCGACC 45560380 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||| ||||| | ||||| ||||| |||||||| Sbjct 45560379 TCAAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAGATTTGCAT 45560333 >seq2 Length=43913520 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | |||||||||||| || ||||| ||||| || Sbjct 31249803 CCGCCGCGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCT 31249744 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| | ||||||||||||| || || || | || || | |||||||||| || Sbjct 31249743 AGGGTTCTGCCGTCCTCCAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGG 31249684 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||| ||||| |||||| || || | | ||| || || | ||| Sbjct 31249683 ATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCGACC 31249624 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | || |||||||||||||||| ||||| || || || ||||||||| Sbjct 31249623 TCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATTTTG 31249573 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| ||| | || ||||| || |||||||| ||||| || Sbjct 39748032 CCACCACGGAGTCGGAGAACCAGATGGAGTGTTGACTCTTTCTGAATGTTGTAGTCTGCA 39747973 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | |||||||| || || || || | || | ||||||||||| ||| Sbjct 39747972 AGAGTCCTGCCATCCTCCAGTTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGA 39747913 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| |||||| | | | | ||||| | ||| Sbjct 39747912 ATTCCTTCCTTGTCCTGGATCTTAGCTTTCACATTGTCAATCGTATCCGAGCTCTCAACC 39747853 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| |||||| |||||||| || || || |||||||| || ||||| Sbjct 39747852 TCCAGGGTAATAGTCTTGCCTGTCAAGGTCTTGACAAAAATCTGCAT 39747806 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||| || || | ||| || | ||| | ||||||||||| || ||||| ||||| ||| Sbjct 39747348 CCCCCGCGGAGACGGAGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCC 39747289 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | || || ||||| || || || ||||||| | ||||| || || Sbjct 39747288 AGAGTCCTGCCATCTTCGAGCTGCTTACCAGCGAAAATAAGACGTTGCTGATCAGGAGGA 39747229 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| ||| || | | ||| || ||| ||| Sbjct 39747228 ATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATTGTGTCAGAACTTTCCACC 39747169 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| |||||||| ||||| | ||||| ||||| || ||||| Sbjct 39747168 TCCAAGGTGATGGTCTTTCCGGTCAGAGTTTTCACAAAGATCTGCAT 39747122 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| ||| | || || || || |||||||| || || || Sbjct 39747804 CCTCCACGGAGACGGAGGACCAGATGGAGTGTTGATTCTTTCTGAATGTTGTAATCAGCT 39747745 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| ||||||| ||||| || || ||| | || || ||||||||||| || Sbjct 39747744 AGGGTTCTTCCGTCCTCAAGCTGCTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 39747685 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||| || |||||| |||||| | | | | |||||| | ||| Sbjct 39747684 ATCCCTTCCTTATCCTGGATCTTAGCTTTCACATTGTCAATAGTATCCGAGCTCTCAACC 39747625 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | |||||| ||||| || || || || ||||| || || ||||| Sbjct 39747624 TCAAGGGTAATAGTCTTTCCTGTCAAGGTCTTGACGAAAATCTGCAT 39747578 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | | ||| | ||| | || |||||||| || ||||| ||||| | Sbjct 39748262 TTCCACCACGAAGACGCAACACAAGATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGG 39748203 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | ||||| | ||||||||| ||| || || || | || | ||||| ||||| || Sbjct 39748202 CAAGGGTCCTGCCGTCCTCCAACTGCTTACCAGCGAAGATCAACCTCTGTTGGTCTGGGG 39748143 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||||||||| |||||| || || | | | | ||||| ||| Sbjct 39748142 GAATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTATCTGAACTCTCAA 39748083 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | |||||| ||||| || || || || |||||||| || ||||| Sbjct 39748082 CTTCAAGGGTAATAGTCTTTCCTGTCAAGGTCTTGACAAAAATCTGCAT 39748034 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | || | ||||| ||||| ||||| || || || ||| Sbjct 39747576 CCTCCACGAAGACGGAGCACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCC 39747517 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || ||||||| ||||| || || ||| | || | ||||||||||||| ||| Sbjct 39747516 AGAGTCCTTCCGTCCTCGAGCTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCCGGGGGA 39747457 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| ||||| || ||||| || || | | | | || || | ||| | Sbjct 39747456 ATGCCCTCCTTATCCTGAATCTTGGCCTTGACATTGTCAATTGTGTCTGAGCTCTCGACT 39747397 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || ||||| ||||| ||||| || || || || ||||| Sbjct 39747396 TCCAGAGTGATCGTCTTTCCGGTCAACGTCTTAACGAAGATCTGCAT 39747350 >seq3 Length=50312079 Score = 113 bits (124), Expect = 4e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| ||| | || |||||||||||||| || ||||| ||| Sbjct 6144178 CCTCCACGCAGACGAAGCACCAGATGAAGGGTAGACTCCTTTTGAATATTGTAGTCGGCC 6144119 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||||||| || || ||| | ||||| ||||||||||| || Sbjct 6144118 AGTGTGCGGCCATCCTCCAGCTGCTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGG 6144059 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCAC 21100 | |||||||||||| |||||| |||||| Sbjct 6144058 ATGCCTTCCTTGTCCTGAATCTTTGCTTTCAC 6144027 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 ||||||| || || | || |||| ||| | || |||||||| |||||||| || || | Sbjct 6143496 TTCCCCCACGTAGACGCAGAACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCGG 6143437 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||| ||| | | ||||| |||||||| || ||| | || || ||||||||||| | Sbjct 6143436 CCAAGGTCCGTCCATCCTCTAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGTG 6143377 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || |||||||| |||||| ||| || | | | |||||| | || Sbjct 6143376 GGATACCCTCCTTGTCCTGGATCTTAGCTTTGACATTATCAATGGTATCAGAGCTTTCGA 6143317 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||| | || || |||||||| || | || || ||||| || |||||| Sbjct 6143316 CTTCTAGAGTGATAGTCTTGCCAGTAAGTGTCTTTACAAAAATCTGCATT 6143267 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||| | || || ||||| || ||||||||||| || Sbjct 6143722 CCACCGCGAAGGCGGAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTATAGTCAGCA 6143663 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | || || ||||| ||||| ||| |||| || ||||||||||| || Sbjct 6143662 AGGGTACGCCCATCTTCGAGCTGCTTGCCAGCAAAAATGAGCCTCTGCTGGTCTGGTGGG 6143603 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||| || | | | ||||||| || | Sbjct 6143602 ATACCCTCCTTGTCCTGGATCTTAGCTTTGACATTATCAATAGTATCAGAACTTTCAACT 6143543 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | || || ||||| ||||| | || || || || || |||||| Sbjct 6143542 TCTAGAGTGATAGTCTTTCCGGTAAGGGTCTTTACGAAAATCTGCATT 6143495 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || ||| | |||| ||| | |||||| |||||||||||||| || || ||| Sbjct 6143950 CCACCTCTCAACCTCAATACCAGATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCC 6143891 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | ||||||| || || || ||| |||| | ||||||||||| ||| Sbjct 6143890 AATGTCCTACCATCCTCCAATTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGGGGA 6143831 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| || || |||||| | | | | |||||| || | Sbjct 6143830 ATTCCCTCCTTGTCTTGAATTTTCGCTTTCACATTGTCAATTGTATCAGAACTTTCTACT 6143771 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | |||||| ||||| || || | || || ||||| |||||||| Sbjct 6143770 TCAAGGGTAATCGTCTTCCCAGTGAGAGTCTTAACAAAGATTTGCAT 6143724 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 ||||||| || || | || |||| ||| | || |||||||| |||||||| || || | Sbjct 6143268 TTCCCCCACGTAGACGCAGAACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAG 6143209 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | | ||| | | ||||| ||||| || || ||| | || || |||||||| || | Sbjct 6143208 CTAAGGTCCGTCCATCCTCTAGCTGCTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAG 6143149 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGC--TC 21124 | | ||||||||||| ||||| ||| || | | | | ||| | ||| | || Sbjct 6143148 GGATACCTTCCTTGTCTTGAATCTTCGCTTTGACATTGTCAATAGTGT--CCGAACTTTC 6143091 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || |||||||| || | ||||| |||||||| ||||| Sbjct 6143090 AACCTCGAGGGTGATTGTCTTGCCAGTAAGAGTTTTCACAAATATCTGCAT 6143040 >seq7 Length=36358036 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | |||||||||||| || ||||| ||||| || Sbjct 14364775 CCGCCGCGGAGGCGGAGAACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCT 14364716 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| | ||||||| ||||| ||||| || | || || | |||||||||| || Sbjct 14364715 AGGGTTCTGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 14364656 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||| ||||| ||||| ||| || | | ||| || || || ||| Sbjct 14364655 ATGCCTTCTTTGTCTTGAATCTTGGCTTTGACATTGTCGATTGTGTCGGAGGATTCCACC 14364596 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 |||| ||| || || |||||||| | ||||| || || || ||||| ||| Sbjct 14364595 TCCAGGGTGATAGTTTTGCCGGTGAGGGTTTTCACGAAGATCTGCATCTTG 14364545 >seq15 Length=668940 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| || || |||||||| | ||||||||| || || || Sbjct 334887 GTGGACTCCTTCTGGATGTTGTAATCAGCCAGGGTCCTGCCGTCCTCCAATTGCTTACCA 334828 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || | | ||||||||| || | ||||||||||| |||||| ||| Sbjct 334827 GCAAAGATCAAACGCTGCTGGTCTGGCGGAATACCTTCCTTGTCCTGGATCTTAGCCTTC 334768 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | ||||| | ||| ||| | ||||| ||||| || || || || Sbjct 334767 ACGTTGTCAATGGTATCTGAGCTCTCAACTTCGAGAGTAATAGTCTTCCCTGTCAAGGTC 334708 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 334707 TTGACAAAGATCTGCAT 334691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422234364033416