Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 2e-11 >seq6 Length=36610139 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || | |||||| | || ||||| ||||||||| ||| ||| | | Sbjct 34406760 ATGCAGATCTTTGTTAAAACACTCACTGGCAAGACCATTACCTTAGAAGTTGAAAGCTCT 34406819 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | || | ||| || ||| || || ||||| | || ||||| Sbjct 34406820 GACACCATTGACAATGTTAAGGCTAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAG 34406879 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212 || || |||||||| ||||||||||| | || ||| || | | || || ||||||| Sbjct 34406880 CAGAGGCTTATCTTCGCGGGCAAACAGCTTGAGGATGGTCGTACATTA--GCTGATTACA 34406937 Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||||| |||||||| || ||||| |||| | || |||| || || Sbjct 34406938 ATATTCAGAAGGAATCCACCCTTCATCTGGTTCTTCGTCTACGTGGTGG 34406986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410772638215964