Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3 179 3e-40 seq1 113 4e-20 seq7 104 2e-17 seq6 104 2e-17 seq2 98.7 9e-16 >seq3 Length=50312079 Score = 179 bits (198), Expect = 3e-40 Identities = 395/583 (68%), Gaps = 13/583 (2%) Strand=Plus/Plus Query 57546 ATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTT 57605 ||||| || ||| |||| || | || ||| | |||||||| || || || || || || Sbjct 34658486 ATGTTCCCAATTCAATACCCTCAGATCTGGGAGATGTACAAGAAAGCCGAGGCCTCTTTC 34658545 Query 57606 TGGACCGTCGAAGAAGTAGACCTGTCTAAGGATC-TGAGCGATTGGGATTCCCTCAAAGA 57664 ||||||| ||| ||||| || | ||| | ||| || | | ||||| | | | Sbjct 34658546 TGGACCGCCGAGGAAGTCGATTTATCTCAAGATAATGTTC-ACTGGGAAGCTTTGACT-- 34658602 Query 57665 ATCTGA-GAGAA--ATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTAT 57721 ||||| ||||| | ||||||| || || | || ||||||||||| || ||||| || Sbjct 34658603 -TCTGATGAGAAGCACTTTATTACCCATGTTCTCGCTTTTTTCGCCGCTTCTGATGGCAT 34658661 Query 57722 TGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATG 57781 ||| ||||||||||| || || ||| | || ||||| ||| |||||||||| Sbjct 34658662 TGTGCTCGAGAATTTGGCCGGGAGGTTTATGAAGGAGGTGCAGGTGGCGGAGGCGAGGGC 34658721 Query 57782 CTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCAT 57841 ||||| || ||||| | || || || || | ||||| || |||||| | | | Sbjct 34658722 TTTTTATGGGTTTCAGATTGCGATAGAGAATATTCATTCGGAGATGTATAGTTTGTTGTT 34658781 Query 57842 CGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAAT 57901 || | || | ||||| || ||||| || |||||| ||||| || || || Sbjct 34658782 GGAGAGTTATATTAAGGATTCGGAGGAGAAGGCGAGGTTGTTCAGGGCGATTGAGACGAT 34658841 Query 57902 GCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCAC 57961 || ||| |||||||| ||||| | || | ||||| | | | || | Sbjct 34658842 TCCGTGTGTCGAGAAGAAGGCCAAGTGGGCGATGAGGTGGATTGATGGAG---GGGAGTC 34658898 Query 57962 GTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT 58021 ||| || |||||| | || ||||| || || ||||| || || || ||||| ||||| Sbjct 34658899 GTTTGCGGAGAGGATTATTGCGTTTGCTTGTGTGGAAGGGATTTTTTTCTCGGGGAGCTT 34658958 Query 58022 -TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACG 58080 ||| || || |||||| ||||||| | || || |||||||| |||| || || | Sbjct 34658959 CTGC-GCGATTTTTTGGCTGAAGAAGAGGGGGCTTATGCCCGGATTGACTTTCTCGAATG 34659017 Query 58081 AGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTG 58123 || |||| ||| | || |||||||| ||| ||||||||| || Sbjct 34659018 AGCTGATTTCGAGGGATGAGGGTCTGCATTGTGATTTTGCATG 34659060 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || |||||||| || || || ||||| ||| | || || ||| || Sbjct 6143723 CATGCAAATCTTTGTTAAGACTCTCACTGGGAAGACGATTACCCTTGAAGTAGAAAGTTC 6143782 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | || ||| || ||| |||||||| || | || || ||||| Sbjct 6143783 TGATACAATTGACAATGTGAAAGCGAAAATTCAAGACAAGGAGGGAATTCCCCCAGACCA 6143842 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || || ||||| || || ||||| || || ||| || ||||| || Sbjct 6143843 GCAGAGGTTGATTTTTGCTGGTAAGCAATTGGAGGATGGTAGGACATTGGCTGATTACAA 6143902 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||||||| ||||| ||||||||||||||| | || |||| || || Sbjct 6143903 CATTCAAAAGGAATCCACTCTTCATCTGGTATTGAGGTTGAGAGGTGG 6143950 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||||||||| || || || ||||| | || ||||| || Sbjct 6143951 CATGCAGATATTTGTGAAGACTCTGACTGGGAAGACTATCACACTTGAGGTTGAGAGCTC 6144010 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 |||| | || | || ||| || ||| | ||||||||||||| | || || |||| Sbjct 6144011 AGACACCATTGATAATGTGAAAGCAAAGATTCA-GGACAAGGAAGGCATCCCACCAGACC 6144069 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 ||||| | || ||||| ||||| || ||| |||| || || || ||| || | Sbjct 6144070 AGCAGAGGCTTATATTTGCTGGAAAGCAGCTGGAGGATGGCCGCACACTGGCCGACTACA 6144129 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 | |||||||| || || || ||||||||||| ||| | ||| | || || Sbjct 6144130 ATATTCAAAAGGAGTCTACCCTTCATCTGGTGCTTCGTCTGCGTGGAGG 6144178 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || || ||||| || ||||| || |||||| |||| |||||| || Sbjct 6143040 ATGCAGATATTTGTGAAAACTCTTACTGGCAAGACAATCACCCTCGAGGTTGAAAGTTCG 6143099 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | |||||| || || ||||||||||| | || || || ||| Sbjct 6143100 GACACTATTGACAATGTCAAAGCGAAGATTCAAGACAAGGAAGGTATCCCTCCAGATCAG 6143159 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371 ||| | || || || ||||| || ||| | || || | | | | ||| ||||| || Sbjct 6143160 CAGAGGCTCATCTTTGCTGGTAAGCAGCTAGAGGA-TGGACGGACCTTAGCTGATTACAA 6143218 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||| || || ||||| |||||| |||| || Sbjct 6143219 CATTCAGAAGGAGTCGACCCTTCATTTGGTTCT 6143251 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||||||||| || || || || || ||||| | || |||||| || Sbjct 6143496 ATGCAGATTTTCGTAAAGACCCTTACCGGAAAGACTATCACTCTAGAAGTTGAAAGTTCT 6143555 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | || | |||||| | || ||||||||| || | || || |||||| Sbjct 6143556 GATACTATTGATAATGTCAAAGCTAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAG 6143615 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || |||||||| ||| | ||||| || | || |||||| Sbjct 6143616 CAGAGGCTCATTTTTGCTGGCAAGCAGCTCGAAGATGGGCGTACCCTTGCTGACTATAAC 6143675 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || ||||| || || ||| |||| || Sbjct 6143676 ATCCAGAAGGAATCAACCCTCCATTTGGTGCT 6143707 >seq1 Length=51465339 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || |||||||| || || || |||||||| |||||| | || || ||| | ||| Sbjct 30446453 ATGCAGATCTTCGTAAAAACCCTCACCGGCAAAACCATCACCCTGGAGGTGGAATCCTCC 30446394 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | ||| ||||| |||||| | || ||||||||| Sbjct 30446393 GACACCATCGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATCCCTCCCGACCAG 30446334 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || || || ||||| || |||||| | || ||| | || | ||| || ||| Sbjct 30446333 CAACGCCTCATCTTCGCCGGAAAACAGCTCGAGGACGGCAGAACCCTAGCCGACTACAAC 30446274 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || ||||| ||||| || || || || Sbjct 30446273 ATCCAGAAGGAATCCACTCTCCACCTCGTCCT 30446242 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || || || || || || || |||||| | || || ||| ||| Sbjct 45560333 ATGCAAATCTTTGTGAAAACCCTCACCGGAAAGACCATCACCCTTGAGGTCGAAAGCTCC 45560392 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | ||| ||| ||||||||| | || || |||||| Sbjct 45560393 GACACAATCGACAACGTCAAGGCCAAAATCCAGGATAAGGAAGGCATTCCCCCAGACCAG 45560452 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || ||||||||||| || | |||||| | ||| | ||| || || Sbjct 45560453 CAGAGGTTGATCTTCGCTGGCAAGCAACTTGAAGACGGCAGGACCCTTGCCGACTACAAT 45560512 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || ||||| ||| |||| || Sbjct 45560513 ATCCAGAAGGAGTCAACTCTCCATTTGGTCCT 45560544 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| |||| || || || || || | || ||||| || Sbjct 45561245 ATGCAGATCTTTGTCAAGACCTTGACCGGAAAGACTATTACTCTTGAGGTTGAGAGCTCT 45561304 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || |||||||||||| | || || || ||| Sbjct 45561305 GACACCATTGACAATGTCAAGGCTAAGATTCAGGACAAGGAAGGAATCCCACCAGATCAG 45561364 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||| | || || ||||| || || ||||||||| | |||| | ||||| ||| Sbjct 45561365 CAGCGTTTGATCTTTGCTGGAAAGCAATTGGAAGACGGCAGGACTCTTGCTGATTACAAC 45561424 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || || ||||| || || ||| | ||| | || |||| Sbjct 45561425 ATTCAGAAGGAGTCTACACTTCACCTTGTGCTTCGTCTGCGTGGTGGTA 45561473 >seq7 Length=36358036 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| || || || || |||||||| |||||| | || || ||| | Sbjct 14364546 AAGATGCAGATCTTCGTGAAAACCCTCACCGGCAAAACTATCACCCTGGAGGTGGAATCC 14364605 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | |||||| | || ||||| |||||| | ||||| ||| Sbjct 14364606 TCCGACACAATCGACAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCGCCGGAC 14364665 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||| ||||| ||| | || ||| | || | ||| || Sbjct 14364666 CAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCAGAACCCTAGCCGACTAC 14364725 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || ||||| || || || || Sbjct 14364726 AACATCCAGAAGGAGTCCACTCTCCACCTCGTTCT 14364760 >seq6 Length=36610139 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| || ||||| || || |||||| | || || ||| || Sbjct 34407216 ATGCAAATCTTTGTCAAGACCCTCACAGGGAAGACAATCACCCTTGAAGTAGAAAGTTCG 34407275 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | || || | ||| ||||||||||| | || || |||||| Sbjct 34407276 GATACAATTGACAATGTGAAGGCAAAAATCCAAGACAAGGAAGGAATCCCCCCGGACCAG 34407335 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || |||||||| |||||||| || | ||| || ||||| || Sbjct 34407336 CAGAGGTTGATTTTTGCTGGCAAGCAGTTGGAGGATGGAAGGACATTGGCTGATTACAAT 34407395 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || ||||| || || ||| ||||||| || |||||||| || Sbjct 34407396 ATTCAGAAGGAATCCACACTCCATTTGGTACTGAGGCTGAGGGGTGG 34407442 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || || ||||| || || || || || ||| | || |||||| || Sbjct 34406532 ATGCAGATCTTTGTGAAAACTCTTACCGGAAAGACCATAACCCTTGAGGTTGAAAGCTCT 34406591 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || |||||||||||| | || ||||| ||| Sbjct 34406592 GACACAATCGACAATGTCAAGGCTAAGATTCAAGACAAGGAAGGCATCCCTCCCGATCAG 34406651 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371 ||| | || || || || ||||||||| | || || | |||| | ||| || ||||| Sbjct 34406652 CAGAGGCTTATCTTTGCGGGCAAACAGCTCGAGGATGGAAGGACT-TTAGCTGACTATAA 34406710 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || ||||| || |||||| |||| ||| Sbjct 34406711 TATTCAGAAGGAATCCACCCTTCATTTGGTTCTT 34406744 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || || || || || ||||| || || ||| | || |||||| || Sbjct 34406759 CATGCAGATCTTTGTTAAAACACTCACTGGCAAGACCATTACCTTAGAAGTTGAAAGCTC 34406818 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || | || ||||||||||||| | || || || || Sbjct 34406819 TGACACCATTGACAATGTTAAGGCTAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCA 34406878 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATA 31370 |||| | || || ||||| ||||||||| | || || | || || ||| ||||| | Sbjct 34406879 GCAGAGGCTTATCTTCGCGGGCAAACAGCTTGAGGATGGTCGTAC-ATTAGCTGATTACA 34406937 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 | ||||| || ||||| || ||||||||||| ||| Sbjct 34406938 ATATTCAGAAGGAATCCACCCTTCATCTGGTTCTT 34406972 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || ||||| || || || || || || ||| | || || || || Sbjct 34641801 CATGCAAATCTTTGTCAAGACGCTTACTGGAAAGACAATTACCTTGGAGGTAGAGAGCTC 34641860 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 || | | || | || || || ||| | ||||| || || | || || || | Sbjct 34641861 TGATACAATTGACAATGTTAAGGCAAAGA-TCCAAGACAAAGAGGGAATTCCTCCAGATC 34641919 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 ||||| | | ||||| ||||| || |||||||| ||| | ||| || ||||| | Sbjct 34641920 AGCAGAGGTTGATATTTGCTGGGAAGCAGTTGGAGGACGGAAGGACATTGGCAGATTACA 34641979 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||||||| ||||| || |||||| ||||| | || |||||||| || Sbjct 34641980 ACATTCAAAAGGAATCCACACTTCATTTGGTATTGAGGCTGAGGGGTGG 34642028 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || |||||| ||||||| || || ||||| | || || || ||| Sbjct 34079582 ATGCAGATTTTTGTGAAGACTTTGACAGGAAAGACCATCACGCTAGAGGTGGAGAGCTCC 34079641 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || | |||||| || ||| | | |||| || ||| | || || ||||| Sbjct 34079642 GACACTATTGATAATGTCAAAGCAAAGATTCAAG-ACAAAGAGGGCATCCCACCAGACCA 34079700 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || ||||| ||||| ||||| | ||||| || | || || || Sbjct 34079701 GCAGAGGCTTATATTTGCTGGAAAACAACTTGAAGATGGCCGCACACTTGCAGACTACAA 34079760 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||||||||| || || || ||||| || || Sbjct 34079761 TATTCAAAAAGAGTCTACCCTCCATCTTGTGCT 34079793 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||| ||||||| || || ||||| | || || || || Sbjct 34642030 ATGCAGATCTTTGTGAAGACTTTGACAGGAAAGACCATCACGCTAGAGGTGGAGAGCTCT 34642089 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || | |||||| || ||| | | ||||||| ||| | || || ||||| Sbjct 34642090 GACACTATTGATAATGTCAAAGCAAAGATTCAAG-ACAAGGAGGGCATCCCACCAGACCA 34642148 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || ||||| ||||| ||||| | ||||| || | || || || Sbjct 34642149 GCAGAGGCTTATATTTGCTGGAAAACAACTTGAAGATGGCCGCACACTTGCAGACTACAA 34642208 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||||||||| || || |||||||| || || Sbjct 34642209 TATTCAAAAAGAGTCTACCCTTCATCTTGTGCT 34642241 >seq2 Length=43913520 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || || |||||||| || || || |||||| | || || ||| || Sbjct 39747122 ATGCAGATCTTTGTGAAAACTCTGACCGGAAAGACCATCACCTTGGAGGTGGAAAGTTCT 39747181 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | || ||||||||||||| | || || || ||| Sbjct 39747182 GACACAATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 39747241 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || |||||||| || ||| | ||||| | |||| || || || ||| Sbjct 39747242 CAACGTCTTATTTTCGCTGGTAAGCAGCTCGAAGATGGCAGGACTCTGGCTGACTACAAC 39747301 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || || || ||||| || || Sbjct 39747302 ATCCAGAAGGAGTCCACACTCCATCTTGTCCT 39747333 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||| || || || |||||| | || ||||| || Sbjct 39748262 ATGCAGATCTTTGTCAAGACCCTGACTGGGAAGACAATCACCCTTGAAGTTGAGAGCTCT 39748321 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | |||||| | ||| ||| ||||||||| | || || |||||| Sbjct 39748322 GACACTATTGACAACGTCAAAGCAAAAATTCAGGATAAGGAAGGCATCCCACCAGACCAG 39748381 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||| | || || ||||| || |||||||| || Sbjct 39748382 CAGCGTTTGATCTTTGCTGGAAAGCAGTTGGAGGA 39748416 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || ||||| |||||||||| || || ||| | || ||||| || Sbjct 39747806 ATGCAGATTTTTGTCAAGACCTTGACAGGCAAGACTATTACCCTGGAGGTTGAGAGCTCG 39747865 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | || ||| | || |||||||||||| | || || |||||| Sbjct 39747866 GATACGATTGACAATGTGAAAGCTAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAG 39747925 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || |||||||| || || |||| || | |||| | || || ||| Sbjct 39747926 CAGAGGTTGATCTTCGCTGGTAAGCAACTGGAGGATGGCAGGACTCTTGCAGACTACAAC 39747985 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||||| || || || |||||||| || |||| | || |||| Sbjct 39747986 ATTCAGAAAGAGTCAACACTCCATCTGGTTCTCCGACTCCGTGGTGGTA 39748034 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| || || || || ||||| || ||||| |||| || || | Sbjct 31249574 AAAATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATCACTCTCGAGGTCGAGTCT 31249633 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | ||||| | || |||||| |||||| | || || ||| Sbjct 31249634 TCGGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCTCCGGAC 31249693 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||| || || ||| |||| ||| | || | ||| || Sbjct 31249694 CAGCAGCGCCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCAGAACCCTAGCCGACTAC 31249753 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || ||||| || || || || Sbjct 31249754 AACATCCAGAAGGAGTCCACTCTCCACCTCGTCCT 31249788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445739509141920