Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq4825 643 1e-179 seq6 435 4e-117 seq8 379 3e-100 seq36 161 1e-34 seq4826 156 5e-33 seq1731 150 2e-31 seq3 134 2e-26 seq4 113 6e-20 seq1 96.9 4e-15 >seq4825 Length=155848 Score = 643 bits (712), Expect = 1e-179 Identities = 723/960 (75%), Gaps = 12/960 (1%) Strand=Plus/Minus Query 135374 TTCTGCGAGTGGGTTACCAGCACCGACAACCGCCTCTATGTGGGTTGGTTTGGAACGCTG 135433 ||||| | ||| | ||||||||||| ||||| || || | || |||||||| || Sbjct 1277 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1218 Query 135434 ATGATTCCTACTCTTCTCGCAGCTGCTATCTGC-TTTATTGTTGCTTTCATCGCTGCACC 135492 ||||| |||||| | | | || || |||| |||||| | || ||||| ||||| || Sbjct 1217 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 1159 Query 135493 TCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATAA 135552 ||| || |||||||| || || || ||||||||| |||| |||||| | || || || || Sbjct 1158 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACAA 1099 Query 135553 CATCATCTCTGGTGCTGTTATCCC---TTCTAGCAACGCCATCGGCCTTCACTTCTATCC 135609 || || || ||||| |||| || |||| ||| || || || | ||||| ||||| Sbjct 1098 TATTATTTCCGGTGCCATTATTCCGACTTCT-GCA--GCTATAGGTTTGCACTTTTATCC 1042 Query 135610 CATCTGGGAAGCTGCTTCTCTTGATGAGTGGCTATATAATGGTGGTCCTTATCAACTAGT 135669 ||||||||||| |||||| ||||||| ||| |||| || |||||||||||| || || | Sbjct 1041 AATCTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGTCCTTATGAATTAAT 982 Query 135670 GGTCTTCCACTTCCTTATCGGTGTCTTCTCTTACATGGGTCGCGAGTGGGAACTCTCTTA 135729 || | ||||| | | ||||| | |||||||||||| |||||||| || || Sbjct 981 CGTTCTACACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTT 922 Query 135730 CCGACTGGGTATGCGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTAC 135789 ||| || |||||||| ||||||||| ||| || || ||||| |||||||| |||||||| Sbjct 921 CCGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 862 Query 135790 TGCTGTTTTCCTGGTCTACCCCTTTGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGG 135849 |||||||||| || ||||||| | || ||||| || |||||||||||| || || Sbjct 861 TGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGG 802 Query 135850 CATTTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAACACAACATTCTCATGCA 135909 || ||||| ||||| |||| |||| |||| |||||||| || |||||||| || ||||| Sbjct 801 AATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCA 742 Query 135910 TCCTTTCCACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCA 135969 || || |||||||| || || ||||| || ||||| ||||| || || ||||||||| Sbjct 741 CCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCA 682 Query 135970 TGGATCTCTTGTCACCTCTAGTCTTGTACGTGAGACGACTGAGGTAGAATCCCAGAACTA 136029 ||| ||| | || ||||||||| | | | || || || || ||||| || | Sbjct 681 TGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 622 Query 136030 TGGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTT 136089 ||||||| |||||| ||||||||||| ||||| || || || || ||||||||||| || Sbjct 621 AGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTT 562 Query 136090 CGGTCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCT 136149 || || | |||||||||||||| ||||||||||||||||| ||||||| ||||| Sbjct 561 TGGCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCT 502 Query 136150 TGCTGCTTGGCCTGTTGTCGGTATCTGGTTTGCTGCCCTGGGCGTATC--TACGATGGCG 136207 |||||||||||||| || |||||||||||| |||| | | ||||| || ||||| Sbjct 501 AGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAG--GTATCAGCACTATGGCT 444 Query 136208 TTCAACCTCAATGGATTCAACTTCAACCAGTCCATTGTATCTTCTGAAGGTCGTGTACTC 136267 |||||||| ||||| ||||| |||||||| || | || | | |||| |||||| | Sbjct 443 TTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATT 384 Query 136268 AACACCTGGGCAGATGTGCTGAATCGTGCTGGTCTGGGTATGGAGGTGATGCACGAGCGT 136327 || || ||||| ||| | | || || ||| || |||||||| || |||||||| ||| Sbjct 383 AATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCACGAACGT 324 Score = 585 bits (648), Expect = 3e-162 Identities = 735/1006 (73%), Gaps = 6/1006 (1%) Strand=Plus/Plus Query 137875 TGGATGACTGGATTAAACGAGATCGCTTTGTATTTGTGGGTTGGTCTGGACTACTACTTT 137934 ||||||||||| | | || || || || ||||| || ||||| || ||| | || | Sbjct 33149 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGTCTATTGCTCT 33208 Query 137935 TTCCCACTGCTTATTTGGCCCTTGGTGGCTGGCTTACTGGCACAACGTTTGTTACAAGCT 137994 |||| ||| ||||| || | || |||||| | || || ||||| ||||| || | Sbjct 33209 TTCCTTGTGCCTATTTCGCTGTAGGAGGCTGGTTCACAGGTACAACCTTTGTAACTTCAT 33268 Query 137995 GGTACACCCACGGGTTGGCGTCTAGTTATCTTGAAGGCGCTAATTTCCTCACAGCAGCTG 138054 |||| ||||| || ||||| | ||| | |||||| |||||| | || || || | Sbjct 33269 GGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAATTTCTTAACTGCCGCAG 33328 Query 138055 TTTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 138114 |||| ||||||||| || | | | |||||| | | |||| ||||||||||| | | Sbjct 33329 TTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTGTGGGGTCCTGAAGCAC 33388 Query 138115 AAGGAGATATCGTCCGCTGGTTCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACG 138174 |||| ||| | || |||| ||| | || || || ||||||||||| || ||||| | Sbjct 33389 AAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCCCTCCATG 33448 Query 138175 GGGCCTTTAGTCTGATTGGATTCATGCTTCGCCAGTTTGAGATCTCTCG-TCTGGTAGGC 138233 | || || | || || || |||||| | || || || || | |||| |||| | | Sbjct 33449 GTGCTTTCGGACTAATAGGCTTCATGTTACGTCAATTCGAACTTGCTCGATCTGTT---C 33505 Query 138234 A--TCCGTCCCTACAACGCAATCGCATTCTCTGGTCCCATCGCTGTGTTCGTCAGCGTGT 138291 | | || || || || |||||||| || |||||||| || ||||| || || || | Sbjct 33506 AATTGCGACCTTATAATGCAATCGCGTTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTAT 33565 Query 138292 TCCTGATGTATCCTTTGGGTCAATCCAGTTGGTTCTTTGCTCCCTCCTTTGGTGTGGCAG 138351 ||||||| ||||| | || ||||| ||||||||||||| || |||||||| |||| Sbjct 33566 TCCTGATTTATCCACTAGGACAATCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCAG 33625 Query 138352 CAATCTTCCGATTCCTGTTGTTCCTTCAGGGTTTCCATAACTGGACCCTCAACCCCTTTC 138411 | || || |||||| | | || |||| || || ||||| ||||| | ||||| |||| Sbjct 33626 CTATATTTCGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACATTAAACCCATTTC 33685 Query 138412 ATATGATGGGCGTAGCAGGTATTCTTGGTGGTGCTCTGCTCTGTGCTATTCATGGTGCTA 138471 |||||||||| || ||||| | | || | |||| |||| || |||||||||||||||| Sbjct 33686 ATATGATGGGAGTTGCAGGGGTATTGGGCGCTGCTTTGCTATGCGCTATTCATGGTGCTA 33745 Query 138472 CAGTAGAAAATACTTTGTATGAAGATGGCGAACAATCAAATACTTTTAAAGCATTTGAAC 138531 | |||||||||||||| | ||||||||| || ||||||| || || ||| | | Sbjct 33746 CTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACC 33805 Query 138532 CTACTCAAGAAGAAGAAACCTATTCAATGGTTACTGCTAACCGTTACTGGTCGCAAATCT 138591 | ||||||| |||||||| ||||||||||| || || ||||| | ||||| ||||||| Sbjct 33806 CAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCGAACCGCTTTTGGTCCCAAATCT 33865 Query 138592 TTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCCGTCA 138651 |||| |||||||| ||||| |||||| | || ||||||||| | ||||| || || | Sbjct 33866 TTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAA 33925 Query 138652 TGGGTCTCTGGACTAGTAGTATTGGTATTATTGGTCTTGCTCTTAACCTACGAGCGTATG 138711 ||| | |||| ||| | |||| | ||||||| || || ||||| || || |||| Sbjct 33926 CTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTGCGCGCCTATG 33985 Query 138712 ATTTCGTATCGCAAGAAATTCGTGCAGCAGAAGATCCTGAATTCGAGACCTTCTACACCA 138771 | ||||| || || |||||||| || ||||||||||||||||| ||||| |||||||| | Sbjct 33986 ACTTCGTTTCTCAGGAAATTCGCGCGGCAGAAGATCCTGAATTTGAGACTTTCTACACAA 34045 Query 138772 AGAACATTCTTCTGAATGAAGGTCTGCGTGCCTGGATGGCTCCTGTGGATCAACCTCACG 138831 | || ||||| | || |||||| | ||||| |||||||| || ||||| ||||| | Sbjct 34046 AAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATG 34105 Query 138832 AAAACTTTGTTTTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 138877 ||||| || | || ||||| || || | || | || |||||||| Sbjct 34106 AAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 34151 >seq6 Length=36610139 Score = 435 bits (482), Expect = 4e-117 Identities = 462/606 (76%), Gaps = 5/606 (1%) Strand=Plus/Plus Query 135713 GAGTGGGAACTCTCTTACCGACTGGGTATGCGCCCTTGGATTTGTGTCGCTTACTCAGCC 135772 ||| |||| || || ||| || |||||||| ||||||||| ||| || || ||||| Sbjct 34152490 GAGAGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCT 34152549 Query 135773 CCTGTTGCCGCTGCTACTGCTGTTTTCCTGGTCTACCCCTTTGGACAAGGTTCTTTCAGT 135832 |||||||| |||||||||||||||||| || ||||||| | || ||||| || | Sbjct 34152550 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCT 34152609 Query 135833 GATGGTATGCCGCTTGGCATTTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAA 135892 ||||||||||| || || || ||||| ||||| |||| |||| |||| |||||||| || Sbjct 34152610 GATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAG 34152669 Query 135893 CACAACATTCTCATGCATCCTTTCCACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCT 135952 |||||||| || ||||| || || |||||||| || || ||||| || ||||| ||||| Sbjct 34152670 CACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCC 34152729 Query 135953 CTGTTCTCTGCTATGCATGGATCTCTTGTCACCTCTAGTCTTGTACGTGAGACGACTGAG 136012 || || |||||||||||| ||| | || ||||||||| | | | || || || || Sbjct 34152730 CTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAA 34152789 Query 136013 GTAGAATCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTT 136072 ||||| || | ||||||| |||||| ||||||||||| ||||| || || || Sbjct 34152790 AATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTA 34152849 Query 136073 GCTGCTCATGGTTACTTCGGT-CGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCG 136131 || ||||||||||| || ||| || | |||||||||||||| |||||||||||||| Sbjct 34152850 GCCGCTCATGGTTATTTTGGTCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCG 34152909 Query 136132 TTCGCTACACTTTTTCCTTGCTGCTTGGCCTGTTGTCGGTATCTGGTTTGCTGCCCTGGG 136191 ||| ||||||| ||||| |||||||||||||| || |||||||||||| |||| | | Sbjct 34152910 TTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAG- 34152968 Query 136192 CGTATC--TACGATGGCGTTCAACCTCAATGGATTCAACTTCAACCAGTCCATTGTATCT 136249 ||||| || ||||| |||||||| ||||| ||||| |||||||| || | || | Sbjct 34152969 -GTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGAT 34153027 Query 136250 TCTGAAGGTCGTGTACTCAACACCTGGGCAGATGTGCTGAATCGTGCTGGTCTGGGTATG 136309 | |||| |||||| | || || ||||| ||| | | || || ||| || |||||| Sbjct 34153028 AGTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATG 34153087 Query 136310 GAGGTG 136315 |||||| Sbjct 34153088 GAGGTG 34153093 >seq8 Length=31745509 Score = 379 bits (420), Expect = 3e-100 Identities = 363/465 (78%), Gaps = 0/465 (0%) Strand=Plus/Plus Query 135700 TTACATGGGTCGCGAGTGGGAACTCTCTTACCGACTGGGTATGCGCCCTTGGATTTGTGT 135759 |||||||||||| |||||||| || || ||| || |||||||| ||||||||| ||| Sbjct 5168712 TTACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGT 5168771 Query 135760 CGCTTACTCAGCCCCTGTTGCCGCTGCTACTGCTGTTTTCCTGGTCTACCCCTTTGGACA 135819 || || ||||| |||||||| |||||||||||||||||| || ||||||| | || || Sbjct 5168772 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCA 5168831 Query 135820 AGGTTCTTTCAGTGATGGTATGCCGCTTGGCATTTCTGGAACTTTTAACTACATGCTTGT 135879 ||| || |||||||||||| || || || ||||| ||||| |||| |||| |||| Sbjct 5168832 AGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 5168891 Query 135880 TTTCCAGGCAGAACACAACATTCTCATGCATCCTTTCCACATGTTGGGAGTTGCTGGGGT 135939 |||||||| || |||||||| || ||||| || || |||||||| || || ||||| || Sbjct 5168892 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGT 5168951 Query 135940 CTTCGGTGGTTCTCTGTTCTCTGCTATGCATGGATCTCTTGTCACCTCTAGTCTTGTACG 135999 ||||| ||||| || || |||||||||||| ||| | || ||||||||| | | | Sbjct 5168952 ATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAG 5169011 Query 136000 TGAGACGACTGAGGTAGAATCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGAC 136059 || || || || ||||| || | ||||||| |||||| ||||||||||| || Sbjct 5169012 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAAC 5169071 Query 136060 TTACAACATTGTTGCTGCTCATGGTTACTTCGGTCGTCTGATCTTCCAATATGCGTCGTT 136119 ||| || || || || ||||||||||| || || || | |||||||||||||| || Sbjct 5169072 TTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTT 5169131 Query 136120 CAACAACTCTCGTTCGCTACACTTTTTCCTTGCTGCTTGGCCTGT 136164 ||||||||||||||| ||||||| ||||| |||||||||||||| Sbjct 5169132 CAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGT 5169176 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 135374 TTCTGCGAGTGGGTTACCAGCACCGACAACCGCCTCTATGTGGGTTGGTTTGGAACGCTG 135433 ||||| | ||| | ||||||||||| ||||| || || | || |||||||| || Sbjct 2878685 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 2878744 Query 135434 ATGATTCCTACTCTTCTCGCAGCTGCTATCTG-CTTTATTGTTGCTTTCATCGCTGCACC 135492 ||||| |||||| | | | || || |||| |||||| | || ||||| ||||| || Sbjct 2878745 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 2878803 Query 135493 TCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATAA 135552 ||| || |||||||| || || || ||||||||| |||| |||||| | || || || || Sbjct 2878804 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACAA 2878863 Query 135553 CATCATCTCTGGTGCTGTTATCCC 135576 || || || ||||| |||| || Sbjct 2878864 TATTATTTCCGGTGCCATTATTCC 2878887 >seq36 Length=917149 Score = 161 bits (178), Expect = 1e-34 Identities = 209/283 (74%), Gaps = 8/283 (3%) Strand=Plus/Minus Query 135389 ACCAGCACCGACAACCGCCTCTATGTGGGTTGGTTTGGAACGCTGATGATTCCTACTCTT 135448 ||||||||||| ||||| || || | || |||||||| ||||||| |||||| | Sbjct 329982 ACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTA 329923 Query 135449 CTCGCAGCTGCTATCTGC-TTTATTGTTGCTTTCATCGCTGCACCTCCCGTCGATATTGA 135507 | | || || |||| |||||| | || ||||| || ||||| || |||||||| Sbjct 329922 TTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCCATTCCTCCAGTAGATATTGA 329864 Query 135508 CGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATAACATCATCTCTGGTGC 135567 || || || ||||||||| | || |||||| | || || || || || || || ||||| Sbjct 329863 TGGTATTCGTGAACCTGTTTCAGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGC 329804 Query 135568 TGTTATCCC---TTCTAGCAACGCCATCGGCCTTCACTTCTATCCCATCTGGGAAGCTGC 135624 |||| || |||| ||| || || || | ||||| ||||| ||||||||||| || Sbjct 329803 CATTATTCCGACTTCT-GCA--GCTATAGGTTTGCACTTTTATCCAATCTGGGAAGCGGC 329747 Query 135625 TTCTCTTGATGAGTGGCTATATAATGGTGGTCCTTATCAACTA 135667 |||| ||||||| ||| |||| || |||||||||||| || || Sbjct 329746 TTCTGTTGATGAATGGTTATACAACGGTGGTCCTTATGAATTA 329704 >seq4826 Length=244980 Score = 156 bits (172), Expect = 5e-33 Identities = 152/196 (78%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 138682 TTGGTCTTGCTCTTAACCTACGAGCGTATGATTTCGTATCGCAAGAAATTCGTGCAGCAG 138741 ||||||| || || ||||| || || ||||| ||||| || || |||||||| || |||| Sbjct 499 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 440 Query 138742 AAGATCCTGAATTCGAGACCTTCTACACCAAGAACATTCTTCTGAATGAAGGTCTGCGTG 138801 ||||||||||||| ||||| |||||||| || || ||||| | || |||||| | |||| Sbjct 439 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 380 Query 138802 CCTGGATGGCTCCTGTGGATCAACCTCACGAAAACTTTGTTTTTCCTGAAGAAGTATTGC 138861 | |||||||| || ||||| ||||| |||||| || | || ||||| || || | | Sbjct 379 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTAC 320 Query 138862 CAAGAGGCAACGCTCT 138877 | | || |||||||| Sbjct 319 CCCGTGGAAACGCTCT 304 >seq1731 Length=31681 Score = 150 bits (166), Expect = 2e-31 Identities = 151/196 (77%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 138682 TTGGTCTTGCTCTTAACCTACGAGCGTATGATTTCGTATCGCAAGAAATTCGTGCAGCAG 138741 ||||||| || || ||||| || || ||||| ||||| || || |||||||| || |||| Sbjct 4297 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 4238 Query 138742 AAGATCCTGAATTCGAGACCTTCTACACCAAGAACATTCTTCTGAATGAAGGTCTGCGTG 138801 ||||||||||||| ||||| |||||||| || || ||||| | || |||||| | |||| Sbjct 4237 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 4178 Query 138802 CCTGGATGGCTCCTGTGGATCAACCTCACGAAAACTTTGTTTTTCCTGAAGAAGTATTGC 138861 | |||||||| || ||||| ||||| |||| | || | || ||||| || || | | Sbjct 4177 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAACCCTTATATTCCCTGAGGAGGTTCTAC 4118 Query 138862 CAAGAGGCAACGCTCT 138877 | | || |||||||| Sbjct 4117 CCCGTGGAAACGCTCT 4102 >seq3 Length=50312079 Score = 134 bits (148), Expect = 2e-26 Identities = 148/196 (76%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 138682 TTGGTCTTGCTCTTAACCTACGAGCGTATGATTTCGTATCGCAAGAAATTCGTGCAGCAG 138741 ||||||| || || ||||| || || ||||| ||||| | ||||||||||| || |||| Sbjct 24072548 TTGGTCTAGCCCTGAACCTCCGCGCCTATGACTTCGTTCCTCAAGAAATTCGCGCGGCAG 24072489 Query 138742 AAGATCCTGAATTCGAGACCTTCTACACCAAGAACATTCTTCTGAATGAAGGTCTGCGTG 138801 ||||||||||||| |||| || ||| ||| || ||||| | || |||||| | |||| Sbjct 24072488 AAGATCCTGAATTTGAGATTTTTGACA-CAAAAATATTCTCTTAAACGAAGGTATTCGTG 24072430 Query 138802 CCTGGATGGCTCCTGTGGATCAACCTCACGAAAACTTTGTTTTTCCTGAAGAAGTATTGC 138861 | |||||||| || ||||| ||||| |||||| || | || ||||| | || | | Sbjct 24072429 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGGGGTTCTAC 24072370 Query 138862 CAAGAGGCAACGCTCT 138877 | | || |||||||| Sbjct 24072369 CCCGTGGAAACGCTCT 24072354 Score = 132 bits (146), Expect = 6e-26 Identities = 149/197 (76%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 138682 TTGGTCTTGCTCTTAACCTACGAGCGTATGATTTCGTATCGCAAGAAATTCGTGCAGCAG 138741 ||||||| || || |||| || || ||||| ||||| || || ||||||| || |||| Sbjct 34945760 TTGGTCTAGCCCTGAACCCGCGCGCCTATGACTTCGTTTCTCAGAAAATTCGCGCGGCAG 34945819 Query 138742 AAGATCCTGAATTCGAGACCTTCTACACCAAGAACATTCTTCTGAATGAAGGTCTGCGTG 138801 ||||||||||||| ||||| |||||||| || || ||||| | || |||||| | |||| Sbjct 34945820 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 34945879 Query 138802 CCTGGATGGCTCCTGTGGATCAACCTCACGAAAACTTTGTTTTTCCTGAAGAAGTAT-TG 138860 | |||||||| || ||||| |||| |||| || | || |||| || ||||| | Sbjct 34945880 CTTGGATGGCGGCTCAAGATCAGACTCATGAAAGACTTATATTCCCTG-AGGAGTATCTA 34945938 Query 138861 CCAAGAGGCAACGCTCT 138877 || | || |||||||| Sbjct 34945939 CCCCGTGGAAACGCTCT 34945955 >seq4 Length=35924511 Score = 113 bits (124), Expect = 6e-20 Identities = 151/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 136118 TTCAACAACTCTCGTTCGCTACACTTTTTCCTTGCTGCTTGGCCTGTTGTCGGTATCTGG 136177 ||||||||||||||||| ||||||| ||||| |||||||||||||| | |||||||| Sbjct 4757228 TTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAATAAGTATCTGG 4757287 Query 136178 TTTGCTGCCCTGGGCGTATC--TACGATGGCGTTCAACCTCAATGGATTCAACTTCAACC 136235 ||| |||| | | ||||| || ||| | |||||||| |||| ||||| ||||||| Sbjct 4757288 TTTACTGCTTTAG--GTATCAGCACTATGACTTTCAACCTAAATGATTTCAATTTCAACC 4757345 Query 136236 AGTCCATTGTATCTTCTGAAGGTCGTGTACTCAACACCTGGGCAGATGTGCTGAATCGTG 136295 | || | || | | ||| ||||| | || || || || ||| | | || || | Sbjct 4757346 AATCTGTAGTTGATAGTCAAGCCTGTGTAATTAATACTTGAGCTGATATCATTAACCGCG 4757405 Query 136296 CTGGTCTGGGTATGGAGGTGATGCACGA 136323 || ||| |||| || || |||| ||| Sbjct 4757406 CTAATCTTGGTAAAGAAGTTATGCTCGA 4757433 >seq1 Length=51465339 Score = 96.9 bits (106), Expect = 4e-15 Identities = 173/254 (68%), Gaps = 19/254 (7%) Strand=Plus/Plus Query 136031 GGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTTC 136090 ||||||| |||||| ||||||||||| ||| || || || | |||||||||| | Sbjct 27733156 GGTTACAGGTTCGGGCAAGAAGAAGAAGCTTGTAATATCGTACCCACTCATGGTTATATT 27733215 Query 136091 GGTCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCTT 136150 ||||| | || ||||||| ||| ||||||||||||| ||| ||||||| ||||| Sbjct 27733216 GGTCGATTAATATTCCAATCTGCTAGTTTCAACAACTCTCATTCTTTACACTTCTTCCTA 27733275 Query 136151 GCTGCTTGGCCTGTTGTCGGTATCTGGTTTGCTGCCCTGGGCGTATC--TACGATGGCGT 136208 | | ||||||||||| || | | | ||||| || ||||| | Sbjct 27733276 GTT----------------GTATCTGGTTTACTAGCTTAAG-GTATCAGCACTATGGCTT 27733318 Query 136209 TCAACCTCAATGGATTCAACTTCAACCAGTCCATTGTATCTTCTGAAGGTCGTGTACTCA 136268 |||| || ||||| |||| |||||||| || | || | | ||| ||||| | | Sbjct 27733319 TCAATCTAAATGGTTTCAGTTTCAACCAATCTGTAGTTGATAGTCAAGACTGTGTAATTA 27733378 Query 136269 ACACCTGGGCAGAT 136282 | || ||||| ||| Sbjct 27733379 ATACTTGGGCTGAT 27733392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627930117830400