Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq4609 140 2e-28 seq4256 131 1e-25 seq4226 131 1e-25 seq3335 131 1e-25 seq2698 131 1e-25 seq3 114 9e-21 seq6 105 4e-18 seq3328 93.3 3e-14 seq4 86.0 4e-12 seq2 84.2 1e-11 seq1 82.4 5e-11 >seq4609 Length=992 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 742 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 683 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 682 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 648 >seq4256 Length=20900 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 668 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 727 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 728 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 762 Score = 86.0 bits (94), Expect = 4e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||| |||| |||||||||||||||||||||||| ||||||| | | | Sbjct 11740 CTCTCTCTTCAAAGTACTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGATATTAC 11799 Query 20007 GGTAATATTTAGCCTTA 20023 | ||||||| |||| Sbjct 11800 CATCGTATTTAGTCTTA 11816 >seq4226 Length=17910 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 861 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 920 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 921 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 955 Score = 116 bits (128), Expect = 2e-21 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 3622 CTCTCTCTTCAAAGTTCTTTTCACCTTTCCCTCACGGTACTTGTGTGCTATCGGTCTCGT 3681 Query 20007 GGTAATATTTAGCCTTA 20023 ||| ||||||||||||| Sbjct 3682 GGTCATATTTAGCCTTA 3698 Score = 116 bits (128), Expect = 2e-21 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 15686 CTCTCTCTTCAAAGTTCTTTTCACCTTTCCCTCACGGTACTTGTGTGCTATCGGTCTCGT 15745 Query 20007 GGTAATATTTAGCCTTA 20023 ||| ||||||||||||| Sbjct 15746 GGTCATATTTAGCCTTA 15762 >seq3335 Length=3421 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||| | Sbjct 792 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCAT 733 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 732 TGATCCATTCATGCGCGTCACTAATTAGATGACGA 698 >seq2698 Length=84112 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 61555 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 61614 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 61615 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 61649 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 67878 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 67937 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 67938 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 67972 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 81036 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 81095 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 81096 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 81130 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||| | Sbjct 47805 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCAT 47864 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 47865 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 47899 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 49792 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 49851 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 49852 GCCTGTATTTAGCCTT 49867 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 69842 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 69901 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 69902 GCCTGTATTTAGCCTT 69917 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 83032 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 83091 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 83092 GCCTGTATTTAGCCTT 83107 >seq3 Length=50312079 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || | || ||| | ||||| |||||| || |||||||||||||||||| || | | Sbjct 6144178 CCTCCACGCAGACGAAGCACCAGATGAAGGGTAGACTCCTTTTGAATATTGTAGTCGGCC 6144119 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || || | || ||||| |||||||| || | || || || | ||| Sbjct 6144118 AGTGTGCGGCCATCCTCCAGCTGCTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGG 6144059 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| |||||| ||| ||| |||||||| | | || ||| || ||||| Sbjct 6144058 ATGCCTTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATGGTGTCTGAGCTCTCAACC 6143999 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||| ||||| || || |||| || ||||| |||||||||||| Sbjct 6143998 TCAAGTGTGATAGTCTTCCCAGTCAGAGTCTTCACAAATATCTGCATG 6143951 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||||||||| | ||| |||| |||||||||| ||||||||||| |||||||||| | Sbjct 6143950 CCACCTCTCAACCTCAATACCAGATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCC 6143891 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || | | || || ||||| || || ||||| || | | || || || | ||| Sbjct 6143890 AATGTCCTACCATCCTCCAATTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGGGGA 6143831 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || ||||| |||||| |||||||| | | ||||| |||||| ||| Sbjct 6143830 ATTCCCTCCTTGTCTTGAATTTTCGCTTTCACATTGTCAATTGTATCAGAACTTTCTACT 6143771 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||||| || || || || | || || || || || |||||| Sbjct 6143770 TCAAGGGTAATCGTCTTCCCAGTGAGAGTCTTAACAAAGATTTGCATG 6143723 Score = 102 bits (112), Expect = 5e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 ||||| ||||||||||| || |||||| ||||| |||||||||| || ||| | Sbjct 6143255 ACGCAGAACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGCTAAGGTCCGTCC 6143196 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 || |||| || || || ||||| || || | || ||||| | |||| ||||| || Sbjct 6143195 ATCCTCTAGCTGCTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAGGGATACCTTCCTT 6143136 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 ||| ||| || || ||||| | | ||| || ||||||||| || | || || Sbjct 6143135 GTCTTGAATCTTCGCTTTGACATTGTCAATAGTGTCCGAACTTTCAACCTCGAGGGTGAT 6143076 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || || | |||||||| ||||||||||| Sbjct 6143075 TGTCTTGCCAGTAAGAGTTTTCACAAATATCTGCAT 6143040 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 35840441 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 35840500 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 35840501 GCCTGTATTTAGCCTT 35840516 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 ||||| ||||||||||| || |||||| ||||| |||||||| | ||| ||| | Sbjct 6143483 ACGCAGAACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCGGCCAAGGTCCGTCC 6143424 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 || |||| ||||| || ||||| || || | || || || | |||| || || || Sbjct 6143423 ATCCTCTAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTT 6143364 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 |||| || || || ||||| | | ||||| ||||| ||||||| || || Sbjct 6143363 GTCCTGGATCTTAGCTTTGACATTATCAATGGTATCAGAGCTTTCGACTTCTAGAGTGAT 6143304 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||| || || || | || || || || |||||||| Sbjct 6143303 AGTCTTGCCAGTAAGTGTCTTTACAAAAATCTGCAT 6143268 >seq6 Length=36610139 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | |||| |||||| ||| ||||| |||||||||||||||| Sbjct 34406986 CCACCACGTAGACGAAGAACCAGATGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCT 34406927 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || ||| | || || | ||||| || || || || || | || ||||| | || Sbjct 34406926 AATGTACGACCATCCTCAAGCTGTTTGCCCGCGAAGATAAGCCTCTGCTGATCAGGAGGA 34406867 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| |||||| ||| || ||| ||||| | | || || ||||||||| Sbjct 34406866 ATGCCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCAATGGTGTCAGAGCTTTCAACT 34406807 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 ||||| ||||| || || || || | ||||| || || ||||||||| Sbjct 34406806 TCTAAGGTAATGGTCTTGCCAGTGAGTGTTTTAACAAAGATCTGCATG 34406759 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 |||||||| | ||| | |||||| || || || || || ||||||||||| |||| Sbjct 34407670 CCACCTCTAAGACGGAGCACCAAGTGGAGGGTAGATTCTTTCTGAATATTGTAGTCAGCA 34407611 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | ||| | || || | || || || ||||| || || | || || || | ||| Sbjct 34407610 AGGGTACGACCATCCTCAAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGG 34407551 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||||||| ||| ||||||| ||||||||| | | || ||| || || || Sbjct 34407550 ATGCCTTCTTTATCCTGAATTTTTGCCTTCACATTATCAATTGTGTCTGAGCTCTCCACC 34407491 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || ||||| || || || ||||| || ||||| || |||||||| Sbjct 34407490 TCCAAAGTAATTGTCTTTCCTGTCAATGTCTTCACAAAAATCTGCAT 34407444 Score = 100 bits (110), Expect = 2e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | ||||||||||| ||| ||||| |||||||| || |||| Sbjct 34406758 CCACCGCGGAGACGAAGAACCAAATGAAGGGTGGATTCCTTCTGAATATTATAGTCAGCT 34406699 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 ||| | | | || || | ||||| || ||||| || || | || ||||||| ||| Sbjct 34406698 AAAGTCCTTCCATCCTCGAGCTGTTTGCCCGCAAAGATAAGCCTCTGCTGATCGGGAGGG 34406639 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| ||||| ||| || ||| ||||| | || || || |||||||| Sbjct 34406638 ATGCCTTCCTTGTCTTGAATCTTAGCCTTGACATTGTCGATTGTGTCAGAGCTTTCAACC 34406579 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTTA 38323 || | || || || || || || | |||||||| || |||||||| | ||| Sbjct 34406578 TCAAGGGTTATGGTCTTTCCGGTAAGAGTTTTCACAAAGATCTGCATCTGTTA 34406526 Score = 100 bits (110), Expect = 2e-16 Identities = 162/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| |||| | || |||||||| || ||| ||||| ||||||||||||| Sbjct 34407446 CATT-CCACCCCTCAGCCTCAGTACCAAATGGAGTGTGGATTCCTTCTGAATATTGTAAT 34407388 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 ||| ||| | | | || || || || || || ||||| || | | || || || | Sbjct 34407387 CAGCCAATGTCCTTCCATCCTCCAACTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCG 34407328 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||||| ||||| ||||| |||||| ||||||||| | | ||||| ||||| Sbjct 34407327 GGGGGATTCCTTCCTTGTCTTGGATTTTTGCCTTCACATTGTCAATTGTATCCGAACTTT 34407268 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| | || || || || || || | ||| || || || || ||||| Sbjct 34407267 CTACTTCAAGGGTGATTGTCTTCCCTGTGAGGGTCTTGACAAAGATTTGCAT 34407216 Score = 95.1 bits (104), Expect = 8e-15 Identities = 161/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| |||| | ||| ||||||||||||||| ||||| ||||| ||||||| Sbjct 34079584 CATT-CCACCCCTCAGCCTCAATACCAAATGAAGAGTGGATTCCTTCTGAATGTTGTAAT 34079526 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | | ||| | | |||| || || || || || |||||||| | | || ||||| | Sbjct 34079525 CTGCCAAGGTCCTTCCGTCCTCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGATCTG 34079466 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | || || ||||| || ||| ||| ||||| | || ||||| || | Sbjct 34079465 GAGGAATTCCCTCCTTGTCTTGGATCTTTGCCTTAACATTGTCGATCGTATCGGAGCTCT 34079406 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| || || || || || || || | ||| || || || || ||||| Sbjct 34079405 CTACTTCCAAGGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAGATTTGCAT 34079354 Score = 95.1 bits (104), Expect = 8e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | || || | |||||||||||| || |||||| || || || || |||| Sbjct 34407216 TACCACCACGCAGGCGGAGCACCAAATGAAGGGTTGACTCCTTCTGGATGTTATAGTCAG 34407157 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | ||| |||| || | || || || ||||| || || | || || || | | Sbjct 34407156 CAAGAGTACGGCCGTCTTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCCGGTG 34407097 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| || || || ||| ||| || || ||||| | | ||| || ||||||| Sbjct 34407096 GGATACCCTCCTTATCCTGAATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCAA 34407037 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 ||||||| |||||||| || || || | ||| || || || ||||||||| Sbjct 34407036 CTTCTAAGGTAATAGTCTTTCCAGTAAGGGTCTTAACAAAAATCTGCATG 34406987 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/233 (69%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| |||| | ||| ||||||||||| ||| ||||||||||| ||||||| Sbjct 34642032 CATT-CCACCCCTCAGCCTCAATACCAAATGAAGTGTGGATTCCTTTTGAATGTTGTAAT 34641974 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | | ||| | | |||| || || || || || |||||||| | | || ||||| | Sbjct 34641973 CTGCCAATGTCCTTCCGTCCTCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGATCTG 34641914 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | || |||||||| || ||| ||| ||||| | | ||||| || | Sbjct 34641913 GAGGAATTCCCTCTTTGTCTTGGATCTTTGCCTTAACATTGTCAATTGTATCAGAGCTCT 34641854 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 | || || || ||||| || || || || | || || || || || |||||| Sbjct 34641853 CTACCTCCAAGGTAATTGTCTTTCCAGTAAGCGTCTTGACAAAGATTTGCATG 34641801 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | ||||||||||| || ||||| |||||||||||||||| Sbjct 34641572 CCACCACGTAGACGAAGAACCAAATGAAGGGTCGATTCCTTCTGAATATTGTAATCAGCT 34641513 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || ||| | || || | ||||| || ||||| || || | || ||||| | ||| Sbjct 34641512 AAGGTACGACCATCCTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAGGG 34641453 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||||||||| ||| || ||| ||||| | | || || ||||| || Sbjct 34641452 ATACCTTCTTTGTCTTGAATCTTAGCCTTGACATTGTCAATGGTGTCCGAGCTTTCTACC 34641393 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || || || || || | |||||||| || |||||||| Sbjct 34641392 TCAAGAGTGATGGTCTTCCCAGTAAGAGTTTTCACAAAGATCTGCAT 34641346 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | ||||||||||| ||| ||||| |||||||||||||||| Sbjct 34079124 CCACCACGTAGACGAAGAACCAAATGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCT 34079065 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || || | || || | ||||| || ||||| || || | || ||||| | ||| Sbjct 34079064 AAGGTGCGACCATCCTCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGAGGG 34079005 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| ||||| ||| || ||| ||||| | | || ||| ||||| || Sbjct 34079004 ATACCTTCCTTGTCTTGAATCTTAGCCTTGACATTGTCAATGGTGTCTGAGCTTTCTACC 34078945 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || || || || || | || ||||| || |||||||| Sbjct 34078944 TCAAGAGTGATGGTCTTCCCGGTAAGAGTCTTCACAAAGATCTGCAT 34078898 Score = 86.0 bits (94), Expect = 4e-12 Identities = 159/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| | | ||| | ||| | |||||| || ||| |||||||||||||| | Sbjct 34642260 CATT-CCACCACGGAGACGGAGCACAAGATGAAGGGTAGACTCTTTTTGAATATTGTAGT 34642202 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | | | || | || || | ||||||||| |||||||| || | || || || | Sbjct 34642201 CTGCAAGTGTGCGGCCATCTTCAAGTTGTTTTCCAGCAAATATAAGCCTCTGCTGGTCTG 34642142 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 |||| ||| || ||||| ||| ||| || ||||| | | ||| || || | Sbjct 34642141 GTGGGATGCCCTCCTTGTCTTGAATCTTTGCTTTGACATTATCAATAGTGTCAGAGCTCT 34642082 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || |||| || || || || || ||||| || ||||| || |||||||| Sbjct 34642081 CCACCTCTAGCGTGATGGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCAT 34642030 Score = 84.2 bits (92), Expect = 1e-11 Identities = 159/233 (68%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| | | ||| | |||||||||||| || ||||| || |||||||| | Sbjct 34079356 CATT-CCACCACGTAGACGGAGCACCAAATGAAGGGTTGATTCCTTCTGGATATTGTAGT 34079298 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 ||| | || |||| || | || || || ||||| || || | || || || | Sbjct 34079297 CAGCAAGGGTGCGACCGTCTTCCAGCTGCTTGCCAGCAAAAATGAGTCTCTGCTGGTCTG 34079238 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||||| ||| || |||||| || || || ||||| | | ||| || |||| Sbjct 34079237 GGGGGATGCCCTCCTTGTCCTGGATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTTT 34079178 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 ||||||||| || || || || || || | || || || |||||||||||| Sbjct 34079177 CAACTTCTAGGGTGATTGTCTTGCCAGTAAGTGTCTTAACAAATATCTGCATG 34079125 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 ||| | ||| | ||| || || ||| |||||||||||||| || | | || | Sbjct 34079797 ACGGAGCACAAGATGGAGGGTAGACTCTTTTTGAATATTGTAGTCTGCAAGTGTGCGGCC 34079738 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 || || | ||||||||| |||||||| || | || || || | |||| ||| ||||| Sbjct 34079737 ATCTTCAAGTTGTTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCCTCTTT 34079678 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 ||| ||| ||| || ||||| | | ||| || || || || |||| || || Sbjct 34079677 GTCTTGAATCTTTGCTTTGACATTATCAATAGTGTCGGAGCTCTCCACCTCTAGCGTGAT 34079618 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || ||||| || ||||| || |||||||| Sbjct 34079617 GGTCTTTCCTGTCAAAGTCTTCACAAAAATCTGCAT 34079582 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 || || || || ||||| || | |||| | | | || |||| || ||||| ||||| Sbjct 34407862 TCTTTCTGGATGTTGTAGTCGGCCAAAGTCCTTCCATCCTCTAGCTGCTTTCCAGCAAAG 34407803 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 || | | || ||||| | |||| ||| ||||||||| ||| || ||||||||| Sbjct 34407802 ATCAACCTCTGCTGATCTGGAGGGATGCCCTCTTTGTCCTGAATCTTCGCCTTCACATTA 34407743 Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306 | | || || ||||||||||||| || || || || || ||||| || || || Sbjct 34407742 TCAATCGTGTCCGAGCTTTCAACTTCTAGAGTGATCGTCTTCCCAGTCAACGTCTTGACA 34407683 Query 38307 AATATCTGCAT 38317 || |||||||| Sbjct 34407682 AAGATCTGCAT 34407672 >seq3328 Length=34111 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 8686 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 8627 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 8626 GCCTGTATTTAGCCTT 8611 >seq4 Length=35924511 Score = 86.0 bits (94), Expect = 4e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 19948 TCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007 ||||| |||||||| ||||||| ||||||||| ||||||||||| | |||||||||| || Sbjct 6752068 TCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGTTATCGGTCTCTCG 6752127 Query 20008 GTAATATTTAGCCTT 20022 ||||||||||| Sbjct 6752128 CCTGTATTTAGCCTT 6752142 >seq2 Length=43913520 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 ||| | ||| | ||||| ||| ||||| |||||||||||||||| || | | | | Sbjct 39747565 ACGGAGCACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCCAGAGTCCTTCC 39747506 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 ||| || | || ||||| ||||| || | | || || || | ||| | ||| || || Sbjct 39747505 GTCCTCGAGCTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCCGGGGGAATGCCCTCCTT 39747446 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 ||| ||| || ||| ||||| | | || ||| || || ||||| | || || Sbjct 39747445 ATCCTGAATCTTGGCCTTGACATTGTCAATTGTGTCTGAGCTCTCGACTTCCAGAGTGAT 39747386 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || ||||| || || ||||| |||||||| Sbjct 39747385 CGTCTTTCCGGTCAACGTCTTAACGAAGATCTGCAT 39747350 >seq1 Length=51465339 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 38087 ATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATC 38146 || |||||| | | |||||||||||| ||||| || |||||| || ||||||||||| Sbjct 45561703 ATCACCACCACGAAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATATTGTAATC 45561644 Query 38147 AGACAAAACACGTT-CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | ||| | || | || || | || || || ||||| || | | || ||||| | Sbjct 45561643 TG-CAAGGGTCCTTCCATCCTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCTG 45561585 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | ||||| || ||| ||| || ||||||||| | | || || || | Sbjct 45561584 GAGGAATACCTTCCTTATCCTGAATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCT 45561525 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| || || ||||| || || |||| || || || || |||||||| Sbjct 45561524 CCACTTCCAAGGTGATAGTCTTTCCAGTCAGAGTCTTAACAAAGATCTGCAT 45561473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334927499452406