Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq4825 619 1e-172 seq6 405 6e-108 seq8 309 3e-79 seq4 181 1e-40 seq36 159 4e-34 seq1 140 4e-28 >seq4825 Length=155848 Score = 619 bits (686), Expect = 1e-172 Identities = 740/997 (74%), Gaps = 8/997 (1%) Strand=Plus/Minus Query 166053 CTTCTGCGAATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACT 166112 |||||| | ||| | ||| ||| | ||||||||||| |||| |||||||| | Sbjct 1278 CTTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 1219 Query 166113 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCAC 166171 |||||| || ||| | ||| | ||||| ||||| || || |||| ||| | || || | Sbjct 1218 GATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTC 1160 Query 166172 CTCCTGTCGATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACA 166231 |||| || ||||| ||||| || ||||| || || | || |||||| | ||||| |||| Sbjct 1159 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACA 1100 Query 166232 ACATCATCTCTGGTGCTGTTGTCCC--CTCCTCCAACGCAATTGGTCTTCACTTCTATCC 166289 | || || || ||||| || | || || || || || || ||| | ||||| ||||| Sbjct 1099 ATATTATTTCCGGTGCCATTATTCCGACTTCTGCA--GCTATAGGTTTGCACTTTTATCC 1042 Query 166290 CATCTGGGAAGCAGCATCACTTGATGAATGGCTTTATAACGGTGGTCCTTTCCAGCTCGT 166349 ||||||||||| || || ||||||||||| | || ||||||||||||| | | | Sbjct 1041 AATCTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGTCCTTATGAATTAAT 982 Query 166350 AGTCTTCCACTTCCTCATCGGCATCTATGCCTACATGGGTCGTGAATGGGAATTGTCTTA 166409 || | ||||| | | || | | |||||||||||||| ||||| | || Sbjct 981 CGTTCTACACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTT 922 Query 166410 CCGCCTCGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATC 166469 ||| || |||||||| ||||||||| || ||||| || || ||||||||||| || | Sbjct 921 CCGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 862 Query 166470 CGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGG 166529 || || ||| || |||| || |||||||||| || ||||| | ||||| || || Sbjct 861 TGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGG 802 Query 166530 TATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTCATGCA 166589 ||| ||| || ||||||| |||| |||| ||||| || |||||||||||||| ||||| Sbjct 801 AATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCA 742 Query 166590 CCCCTTCCATATGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATGCA 166649 ||| || || ||| | || ||||| ||||||||||| || || || || || ||||| Sbjct 741 CCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCA 682 Query 166650 CGGCAGTCTCGTTACTTCCTCGCTCG-TCCGTGAGACCACTGAAACTGAGTCTCAAAACT 166708 || | | || || || | | | | || | || ||||| |||| ||| ||| || Sbjct 681 TGGTTCTTTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATG 623 Query 166709 ATGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACT 166768 | ||||||| ||| || ||||||||||| || || || ||||| || ||||||||||| | Sbjct 622 AAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATT 563 Query 166769 TCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCC 166828 | || || | ||||||||||| ||| |||||||||||||| || | |||||||||| Sbjct 562 TTGGCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCC 503 Query 166829 TCGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCAT 166888 | || || |||||||| || |||||||||||||||||| | ||| | ||||| ||||| | Sbjct 502 TAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGGCTT 443 Query 166889 TCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCA 166948 ||||||| || |||||||| |||||||| || | | ||| |||| || ||||| | | Sbjct 442 TCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTA 383 Query 166949 ACACTTGGGCAGATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTA 167008 | |||||||| ||| || | ||||| ||| || ||||||||||| |||||||| |||| Sbjct 382 ATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCACGAACGTA 323 Query 167009 ATGCTCACAACTTCCCTCTGGATCTTGCTGCTGCTGA 167045 ||||||| ||||||||||| || | ||||||| ||| Sbjct 322 ATGCTCATAACTTCCCTCTAGACTTAGCTGCTGTTGA 286 Score = 544 bits (602), Expect = 9e-150 Identities = 733/1017 (72%), Gaps = 8/1017 (1%) Strand=Plus/Plus Query 167300 TTTGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 167359 |||||| | ||||||||||| | | ||||| || || ||||| || ||||| || Sbjct 33139 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGT 33198 Query 167360 TTACTTCTTTTTCCCACTGCTTATCTGGCAATTGGTGGCTGGCTTACTGGCACGACGTTT 167419 || | || ||||| ||| ||| | || | || |||||| | || || || || ||| Sbjct 33199 CTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGAGGCTGGTTCACAGGTACAACCTTT 33258 Query 167420 GTTACGAGCTGGTATACCCACGGGTTGGCGTCTAGTTACC--TTG--AGGGTGCTAATTT 167475 || || ||||||||||| || ||||| |||| | ||| ||| ||| ||||| Sbjct 33259 GTAACTTCATGGTATACCCATGGATTGGCC---AGTTCCTATTTGGAAGGCTGC-AATTT 33314 Query 167476 TCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTG 167535 | || || ||||| || ||||||||| | | | | |||||| | | |||| || Sbjct 33315 CTTAACTGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTGTG 33374 Query 167536 GGGTCCTGAGTCTCAGGGGGATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGGCTTT 167595 ||||||||| | || |||||||| | | ||||| || | || || || ||| |||| Sbjct 33375 GGGTCCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTT 33434 Query 167596 TGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGATTTATGCTTCGGCAATTTGAGATAAG 167655 ||| || ||||| || || || | || ||||| || ||| | || ||||| || | Sbjct 33435 TGTTGCCCTCCATGGTGCTTTCGGACTAATAGGCTTCATGTTACGTCAATTCGAACTTGC 33494 Query 167656 TAGACTAGTAGGTATCCGTCCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGTCTT 167715 | || || | || ||||| ||||| || || ||||||||||| |||||||| || Sbjct 33495 TCGATCTGTTCAATTGCGACCTTATAATGCAATCGCGTTTTCTGGTCCAATTGCTGTTTT 33554 Query 167716 TGTGTCTGTTTTTCTCATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGTT 167775 ||| ||||| || || || ||||| || ||||| || ||||||||||||| || || Sbjct 33555 TGTTTCTGTATTCCTGATTTATCCACTAGGACAATCTGGTTGGTTCTTTGCGCCAAGTTT 33614 Query 167776 TGGTGTTGCAGCGATATTTAGATTCCTACTATTCCTACAGGGTTTCCATAACTGGACGCT 167835 |||||| ||||| |||||| ||||| | || || | || || || ||||| ||||| | Sbjct 33615 TGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACATT 33674 Query 167836 CAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAAT 167895 ||||| || ||||||||||||||||| || | | |||| ||| ||||| | || || Sbjct 33675 AAACCCATTTCATATGATGGGAGTTGCAGGGGTATTGGGCGCTGCTTTGCTATGCGCTAT 33734 Query 167896 CCATGGTGTTACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCAA 167955 ||||||| ||| ||||| |||||| | | |||||||||||| ||||| || ||| Sbjct 33735 TCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCG 33794 Query 167956 AGCATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTG 168015 || ||| | | ||||| | || ||||||||||| |||||||| || ||||| || || Sbjct 33795 TGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCGAACCGCTTTTG 33854 Query 168016 GTCTCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTT 168075 ||| ||||| ||||| ||||||| |||||| |||||||| || ||||||||| | || Sbjct 33855 GTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 33914 Query 168076 CGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCT 168135 || || || | || | |||| ||| || |||| | | ||||| || || || || Sbjct 33915 TGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCT 33974 Query 168136 TCGTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAAC 168195 || || |||||||| || ||||||||| || | || ||||| ||||| || ||||| || Sbjct 33975 GCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAGAAGATCCTGAATTTGAGAC 34034 Query 168196 TTTCTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGA 168255 |||||| || ||||| || ||| | || ||||| | ||||| |||||||| | ||| Sbjct 34035 TTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGA 34094 Query 168256 CCAACCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312 || || ||||||||| || ||||||| || || || | || | || |||||||| Sbjct 34095 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 34151 >seq6 Length=36610139 Score = 405 bits (448), Expect = 6e-108 Identities = 446/590 (76%), Gaps = 3/590 (1%) Strand=Plus/Plus Query 166407 TTACCGCCTCGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCAGC 166466 || ||| || |||||||| ||||||||| || ||||| || || ||||||||||| || Sbjct 34152504 TTTCCGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGC 34152563 Query 166467 ATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCT 166526 | || || ||| || |||| || |||||||||| || ||||| | ||||| || Sbjct 34152564 TACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCT 34152623 Query 166527 GGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTCAT 166586 || ||| ||| || ||||||| |||| |||| ||||| || |||||||||||||| || Sbjct 34152624 AGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTAT 34152683 Query 166587 GCACCCCTTCCATATGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAAT 166646 |||||| || || ||| | || ||||| ||||||||||| || || || || || || Sbjct 34152684 GCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTAT 34152743 Query 166647 GCACGGCAGTCTCGTTACTTCCTCGCTCG-TCCGTGAGACCACTGAAACTGAGTCTCAAA 166705 ||| || | | || || || | | | | || | || ||||| |||| ||| ||| | Sbjct 34152744 GCATGGTTCTTTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTA 34152802 Query 166706 ACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTT 166765 | | ||||||| ||| || ||||||||||| || || || ||||| || |||||||||| Sbjct 34152803 ATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATGGTT 34152862 Query 166766 ACTTCGGTC-GCCTGATCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTC 166824 | || |||| | | ||||||||||| ||| |||||||||||||| || | |||||| Sbjct 34152863 ATTTTGGTCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTC 34152922 Query 166825 TTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCATG 166884 ||||| || || |||||||| || |||||||||||||||||| | ||| | ||||| ||| Sbjct 34152923 TTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATCAGCACTATG 34152982 Query 166885 GCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTG 166944 || |||||||| || |||||||| |||||||| || | | ||| |||| || ||||| Sbjct 34152983 GCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTA 34153042 Query 166945 CTCAACACTTGGGCAGATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGT 166994 | || |||||||| ||| || | ||||| ||| || |||||||| || Sbjct 34153043 ATTAATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAGGT 34153092 >seq8 Length=31745509 Score = 309 bits (342), Expect = 3e-79 Identities = 349/465 (75%), Gaps = 2/465 (0%) Strand=Plus/Plus Query 166381 TACATGGGTCGTGAATGGGAATTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGCGTA 166440 |||||||||||||| ||||| | || ||| || |||||||| ||||||||| || Sbjct 5168713 TACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTT 5168772 Query 166441 GCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAA 166500 ||||| || || ||||||||||| || | || || ||| || |||| || |||||||| Sbjct 5168773 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAA 5168832 Query 166501 GGTTCTTTCTCTGACGCAATGCCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTC 166560 || || ||||| | ||||| || || ||| ||| || ||||||| |||| |||| Sbjct 5168833 GGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTA 5168892 Query 166561 TTCCAAGCAGAGCACAACATCCTCATGCACCCCTTCCATATGCTGGGTGTAGCAGGTGTA 166620 ||||| || |||||||||||||| |||||||| || || ||| | || ||||| |||||| Sbjct 5168893 TTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTA 5168952 Query 166621 TTCGGTGGGTCACTTTTCTCGGCAATGCACGGCAGTCTCGTTACTTCCTCGCTCG-TCCG 166679 ||||| || || || || || ||||| || | | || || | || | | | || | Sbjct 5168953 TTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCT-CTAGTTTGATCAG 5169011 Query 166680 TGAGACCACTGAAACTGAGTCTCAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGAC 166739 || ||||| |||| ||| ||| || | ||||||| ||| || ||||||||||| || Sbjct 5169012 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAAC 5169071 Query 166740 CTACAACATCGTGGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTT 166799 || || ||||| || ||||||||||| || || || | ||||||||||| ||| || Sbjct 5169072 TTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTT 5169131 Query 166800 CAACAACTCTCGCTCGCTGCACTTCTTCCTCGCAGCATGGCCTGT 166844 |||||||||||| || | ||||||||||| || || |||||||| Sbjct 5169132 CAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGT 5169176 Score = 107 bits (118), Expect = 2e-18 Identities = 143/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 166053 CTTCTGCGAATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACT 166112 |||||| | ||| | ||| ||| | ||||||||||| |||| |||||||| | Sbjct 2878684 CTTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 2878743 Query 166113 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCAC 166171 |||||| || ||| | ||| | |||| | ||||| || || |||| ||| | || || | Sbjct 2878744 GATGATCCCTACTTTATTGACCGCAA-CTTCTGTATTTATTATCGCCTTCATTGCTGCTC 2878802 Query 166172 CTCCTGTCGATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACA 166231 |||| || ||||| ||||| || ||||| || || | || |||||| | ||||| |||| Sbjct 2878803 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACA 2878862 Query 166232 ACATCATCTCTGGTGC 166247 | || || || ||||| Sbjct 2878863 ATATTATTTCCGGTGC 2878878 >seq4 Length=35924511 Score = 181 bits (200), Expect = 1e-40 Identities = 189/248 (76%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 166798 TTCAACAACTCTCGCTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGG 166857 |||||||||||||| || | ||||||||||| || || |||||||| | |||||||| Sbjct 4757228 TTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAATAAGTATCTGG 4757287 Query 166858 TTTACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAG 166917 ||||||||| | ||| | ||||| ||| | |||||||| || | |||||| |||||||| Sbjct 4757288 TTTACTGCTTTAGGTATCAGCACTATGACTTTCAACCTAAATGATTTCAATTTCAACCAA 4757347 Query 166918 TCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGATGTCCTCAACCGTGCT 166977 || | | ||| |||| | |||| | || ||||| || ||| || | ||||| ||| Sbjct 4757348 TCTGTAGTTGATAGTCAAGCCTGTGTAATTAATACTTGAGCTGATATCATTAACCGCGCT 4757407 Query 166978 GGTCTGGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTCTGGATCTTGCT 167037 ||| |||| ||||| |||| ||| | ||||||||| |||||| |||| || | ||| Sbjct 4757408 AATCTTGGTAAAGAAGTTATGCTCGAACATAATGCTCATAACTTCTCTCTAGACTTAGCT 4757467 Query 167038 GCTGCTGA 167045 |||| ||| Sbjct 4757468 GCTGTTGA 4757475 Score = 96.9 bits (106), Expect = 4e-15 Identities = 98/127 (77%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 167672 CGTCCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGTCTTTGTGTCTGTTTTTCTC 167731 || ||||| ||||| || || |||||||||||||||| ||| ||||| | ||| || || Sbjct 12713393 CGACCTTATAATGCAATCGCGTTTTCTGGTCCGATTGTTGTTTTTGTTTATGTATTCCTG 12713334 Query 167732 ATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGTTTGGTGTTGCAGCGATA 167791 || ||||| || |||| || |||| |||||||| | || |||||| | ||| | ||| Sbjct 12713333 ATTTATCCACTATGACAATCTGGTTGATTCTTTGCGCAGT--TTTGGTTTAGCATCTATA 12713276 Query 167792 TTTAGAT 167798 ||| ||| Sbjct 12713275 TTTTGAT 12713269 >seq36 Length=917149 Score = 159 bits (176), Expect = 4e-34 Identities = 199/268 (74%), Gaps = 6/268 (2%) Strand=Plus/Minus Query 166075 ACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACTGATGATTCCAACTCTGTTGGCA 166134 ||| | ||||||||||| |||| |||||||| ||||||| || ||| | ||| | Sbjct 329976 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 329917 Query 166135 GCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCACCTCCTGTCGATATCGATGGGAT 166193 ||||| ||||| || || |||| ||| | || ||||| || ||||| ||||| || Sbjct 329916 GCAACT-TCTGTATTTATTATCGCCTTCATTGCCATTCCTCCAGTAGATATTGATGGTAT 329858 Query 166194 CCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGT 166253 ||||| || || |||| |||||| | ||||| ||||| || || || ||||| || | Sbjct 329857 TCGTGAACCTGTTTCAGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGCCATTAT 329798 Query 166254 CCC--CTCCTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCAGCATCACTT 166311 || || || || || || ||| | ||||| ||||| ||||||||||| || || || Sbjct 329797 TCCGACTTCTGCA--GCTATAGGTTTGCACTTTTATCCAATCTGGGAAGCGGCTTCTGTT 329740 Query 166312 GATGAATGGCTTTATAACGGTGGTCCTT 166339 ||||||||| | || ||||||||||||| Sbjct 329739 GATGAATGGTTATACAACGGTGGTCCTT 329712 >seq1 Length=51465339 Score = 140 bits (154), Expect = 4e-28 Identities = 246/361 (68%), Gaps = 33/361 (9%) Strand=Plus/Plus Query 166686 CACTGAAACTGAGTCTCAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAA 166745 |||||||| ||| || || | ||||||| ||| || ||||||||||| | | || Sbjct 27733131 CACTGAAAATGAACCTGCTAATCAAGGTTACAGGTTCGGGCAAGAAGAAGAAGCTTGTAA 27733190 Query 166746 CATCGTGGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAA 166805 ||||| | |||||||||| | ||||| | || ||||||| ||| |||||||| Sbjct 27733191 TATCGTACCCACTCATGGTTATATTGGTCGATTAATATTCCAATCTGCTAGTTTCAACAA 27733250 Query 166806 CTCTCGCTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTTACT-G 166864 ||||| || | ||||||||||| | |||| |||||||||||| | Sbjct 27733251 CTCTCATTCTTTACACTTCTTCCTAG------------TTGT----ATCTGGTTTACTAG 27733294 Query 166865 CTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCA 166924 || ||| | ||||| ||||| ||||| || || ||||||| |||||||| || | Sbjct 27733295 CTTAAGGTATCAGCACTATGGCTTTCAATCTAAATGGTTTCAGTTTCAACCAATCTGTAG 27733354 Query 166925 TCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGATGTCCTCAACCGTGCTGGTCTGG 166984 | ||| |||| | |||| | || |||||||| ||| || ||||||||| || | Sbjct 27733355 TTGATAGTCAAGACTGTGTAATTAATACTTGGGCTGATATCGATAACCGTGCTAAGCTTG 27733414 Query 166985 GTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTCTGGATCTTGCTGCTGCTG 167044 ||||| |||||||||| ||||||||||| || | ||||||| || Sbjct 27733415 --------GTAAT--------GTAATGCTCATAACTTCCCTCTAGACTTAGCTGCTGTTG 27733458 Query 167045 A 167045 | Sbjct 27733459 A 27733459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567197781729600