Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq3 129 4e-25 seq2 109 4e-19 seq6 102 6e-17 seq1 98.7 7e-16 seq15 82.4 5e-11 >seq3 Length=50312079 Score = 129 bits (142), Expect = 4e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||||| ||| || || || | |||||| || || || ||||| ||||||||||| Sbjct 6143952 TGCCACCTCTCAACCTCAATACCAGATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAG 6143893 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | | || | || || ||||| || ||||| | ||||| | ||| ||||| | Sbjct 6143892 CCAATGTCCTACCATCCTCCAATTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGGG 6143833 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 ||||||| |||||||| |||||| ||| ||| | || || ||||| | |||||| Sbjct 6143832 GAATTCCCTCCTTGTCTTGAATTTTCGCTTTCACATTGTCAATTGTATCAGAACTTTCTA 6143773 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | |||||| || || || || ||||| || ||||| |||||||| Sbjct 6143772 CTTCAAGGGTAATCGTCTTCCCAGTGAGAGTCTTAACAAAGATTTGCAT 6143724 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTT 15025 ||| ||||||||||| || || || || ||||||||||| ||| || || | || | Sbjct 6143249 AACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGCTAAGGTCCGTC-CATCCT 6143191 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 ||| || || ||||| | || | | ||| || || || || ||||||||||| Sbjct 6143190 CTAGCTGCTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAGGGATACCTTCCTTGTCTT 6143131 Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 ||| || ||| ||| | || ||||| || | |||| || || | ||| || || | Sbjct 6143130 GAATCTTCGCTTTGACATTGTCAATAGTGTCCGAACTTTCAACCTCGAGGGTGATTGTCT 6143071 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || || |||||||| ||||| || ||||| Sbjct 6143070 TGCCAGTAAGAGTTTTCACAAATATCTGCAT 6143040 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| ||||||||||| || || || || |||||||||||| | | | | || || Sbjct 6143477 AACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCGGCCAAGGTCCGTCCATCCTC 6143418 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 || ||||| ||||| | || | | ||| ||||| ||| || || |||||||| Sbjct 6143417 TAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTG 6143358 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 || || ||| ||| | || || ||||| |||| || |||| || || || || Sbjct 6143357 GATCTTAGCTTTGACATTATCAATGGTATCAGAGCTTTCGACTTCTAGAGTGATAGTCTT 6143298 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || || ||||||||||| ||||| Sbjct 6143297 GCCAGTAAGTGTCTTTACAAAAATCTGCAT 6143268 >seq2 Length=43913520 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 || || | ||| || ||||| || || || |||||||| ||| || | || |||| Sbjct 39748245 AACACAAGATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCGTCC 39748186 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || || || || |||||| | ||||| | ||||||||| ||||||||||||||||| Sbjct 39748185 TCCAACTGCTTACCAGCGAAGATCAACCTCTGTTGGTCTGGGGGAATTCCTTCCTTGTCT 39748126 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 || ||| || ||| | || || ||||| | | || || || | |||||| || Sbjct 39748125 TGGATCTTGGCCTTGACATTGTCAATGGTATCTGAACTCTCAACTTCAAGGGTAATAGTC 39748066 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || ||||||| || || |||||||| |||||| Sbjct 39748065 TTTCCTGTCAAGGTCTTGACAAAAATCTGCATA 39748033 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | || | ||| | ||| || || || ||||| || |||||||| || Sbjct 39748032 CCACCACGGAGTCGGAGAACCAGATGGAGTGTTGACTCTTTCTGAATGTTGTAGTCTGCA 39747973 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | || | || || | ||| || |||||| | ||||| | ||| ||||| ||| Sbjct 39747972 AGAGTCCTGCCATCCTCCAGTTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGA 39747913 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| || || ||| ||| | || || ||||| | || || Sbjct 39747912 ATTCCTTCCTTGTCCTGGATCTTAGCTTTCACATTGTCAATCGTATCCGAGCTCTCAACC 39747853 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | |||||| || || ||||||| || || |||||||| ||||| Sbjct 39747852 TCCAGGGTAATAGTCTTGCCTGTCAAGGTCTTGACAAAAATCTGCAT 39747806 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | | || || || |||||||| || || || || || || ||||| Sbjct 39748718 TGCCACCACGGAGACGCAAGACCAAGTGAAGGGTGGACTCCTTCTGGATATTATAATCAG 39748659 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| | || | || || | ||| || ||||| | ||||| | ||| || || | Sbjct 39748658 CCAGAGTCCTACCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGAG 39748599 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||||||||||||||| || || || ||| | || || ||||| | | || | Sbjct 39748598 GAATTCCTTCCTTGTCCTGGATCTTCGCCTTAACATTGTCAATGGTATCTGAACTCTCCA 39748539 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | |||| ||| || || || || |||||||| || || ||||| |||||| Sbjct 39748538 CCTCTAGGGTTATAGTCTTGCCGGTCAGAGTCTTCACGAAAATCTGCATA 39748489 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| || || || || || || |||||||| || ||| | || | ||||| | || Sbjct 39747325 ATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTCCTGCCATCTTCGAGCTG 39747266 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || |||||| | || | ||| || || || ||||| ||||||||||| || || Sbjct 39747265 CTTACCAGCGAAAATAAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTT 39747206 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | ||| || | || || || || | |||| || || ||||| ||||| || || || Sbjct 39747205 GGCTTTGACGTTGTCGATTGTGTCAGAACTTTCCACCTCCAAGGTGATGGTCTTTCCGGT 39747146 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 ||||||||| ||||| || ||||| Sbjct 39747145 CAGAGTTTTCACAAAGATCTGCAT 39747122 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||||||||| || || || || ||||| || || | || | || || || || Sbjct 39748464 TGAAGGGTAGACTCCTTCTGGATATTGTAGTCTGCAAGGGTCCTGCCATCCTCCAACTGC 39748405 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || ||||| | ||||||||||| ||||| ||| || |||||||| || |||||| Sbjct 39748404 TTTCCAGCAAAGATCAAACGCTGCTGGTCTGGTGGGATGCCTTCCTTATCCTGAATTTTT 39748345 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 ||| || | || ||||| || | || || || | ||| || || || || ||| Sbjct 39748344 GCTTTGACGTTGTCAATAGTGTCAGAGCTCTCAACTTCAAGGGTGATTGTCTTCCCAGTC 39748285 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| || ||||| Sbjct 39748284 AGGGTCTTGACAAAGATCTGCAT 39748262 >seq6 Length=36610139 Score = 102 bits (112), Expect = 6e-17 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008 ||||| | || || || || |||||||| || || || || || ||||||||||| || Sbjct 34079580 CCACCCCTCAGCCTCAATACCAAATGAAGAGTGGATTCCTTCTGAATGTTGTAATCTGCC 34079521 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || | || |||| || || || || ||||| ||||||| | ||| || || || Sbjct 34079520 AAG-GTCCTTCCGTCCTCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGATCTGGAGG 34079462 Query 15069 AATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||||| |||||||| || ||||| || ||| | || || |||||| | |||| Sbjct 34079461 AATTCCCTCCTTGTCTTGGATCTTTGC-CTTAACATTGTCGATCGTATCGGAGCTCTCTA 34079403 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || ||||| || || || || || || || || ||||| |||||||| Sbjct 34079402 CTTCCAAGGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAGATTTGCAT 34079354 Score = 100 bits (110), Expect = 2e-16 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| | || || || || |||||||| || || || ||||| |||||||||| ||| Sbjct 34642028 CCACCCCTCAGCCTCAATACCAAATGAAGTGTGGATTCCTTTTGAATGTTGTAAT--CTG 34641971 Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 || | || |||| || || || || ||||| ||||||| | ||| || || | Sbjct 34641970 CCAATGTCCTTCCGTCCTCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGATCTGGAG 34641911 Query 15068 GAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126 ||||||| || ||||| || ||||| || ||| | || || ||||| | ||| Sbjct 34641910 GAATTCCCTCTTTGTCTTGGATCTTTGC-CTTAACATTGTCAATTGTATCAGAGCTCTCT 34641852 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || |||||||| || || || || || || || ||||| |||||||| Sbjct 34641851 ACCTCCAAGGTAATTGTCTTTCCAGTAAGCGTCTTGACAAAGATTTGCAT 34641802 Score = 96.9 bits (106), Expect = 2e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||||||||| |||||||| || ||||| || || | | | ||||| | ||| Sbjct 34642233 ATGAAGGGTAGACTCTTTTTGAATATTGTAGTCTGCAAGTGTGCGGCCATCTTCAAGTTG 34642174 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TT 15091 ||| ||||| |||| | | ||| ||||| ||| || || |||||||| ||| || Sbjct 34642173 TTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGAATCTT 34642114 Query 15092 TGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTG 15151 ||| ||| ||| | || ||||| || | || || |||| || ||||| || |||| Sbjct 34642113 TGC-TTTGACATTATCAATAGTGTCAGAGCTCTCCACCTCTAGCGTGATGGTCTTTCCTG 34642055 Query 15152 TCAGAGTTTTTACAAAAATTTGCAT 15176 ||| ||| || ||||| || ||||| Sbjct 34642054 TCAAAGTCTTCACAAAGATCTGCAT 34642030 Score = 96.9 bits (106), Expect = 2e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 |||||||| || ||||| || |||||||| || || |||| | || || || || Sbjct 34642460 TGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCCAGGGTTCTTCCATCCTCCAACTGC 34642401 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || ||||| | |||||||||||||| || ||| ||||| || ||||| ||||| Sbjct 34642400 TTTCCAGCAAAAATCAAACGCTGTTGATCTGGTGGGATTCCCTCTTTGTCCTGGATTTTC 34642341 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || ||||| | || || || ||||| ||||| || || ||| Sbjct 34642340 GCCTTCACATTATCAATTGTATCTGAGCTCTCAACCTCCAAGGTGATGGTCTTGCCAGTC 34642281 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 | || || ||||| |||||||| Sbjct 34642280 AATGTCTTCACAAAGATTTGCAT 34642258 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| | || || | || ||||| || || || || || || || |||||||| Sbjct 34407442 CCACCCCTCAGCCTCAGTACCAAATGGAGTGTGGATTCCTTCTGAATATTGTAATCAGCC 34407383 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | || | || || || || |||||||| | ||||| | ||| ||||| || Sbjct 34407382 AATGTCCTTCCATCCTCCAACTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGGG 34407323 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| ||||| || ||| | || || ||||| | ||||||| Sbjct 34407322 ATTCCTTCCTTGTCTTGGATTTTTGCCTTCACATTGTCAATTGTATCCGAACTTTCTACT 34407263 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| || || || ||||| || || || ||||| ||||||||| Sbjct 34407262 TCAAGGGTGATTGTCTTCCCTGTGAGGGTCTTGACAAAGATTTGCATA 34407215 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 |||||||| || || || || |||||||| || || |||| | || || || || Sbjct 34080012 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTTCTTCCATCCTCCAACTGC 34079953 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || ||||| | |||||||||||||| || ||| ||||| || ||||| ||||| Sbjct 34079952 TTTCCAGCAAAAATCAAACGCTGTTGATCTGGTGGGATTCCCTCTTTGTCCTGGATTTTC 34079893 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || || | || || ||||| | || || || ||||| ||||| || || ||| Sbjct 34079892 GCCTTCACGTTATCAATTGTATCTGAGCTCTCAACCTCCAAGGTGATGGTCTTGCCGGTC 34079833 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 | || || ||||| |||||||| Sbjct 34079832 AATGTCTTCACAAAGATTTGCAT 34079810 Score = 86.0 bits (94), Expect = 4e-12 Identities = 160/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-G 15006 ||||||| || | | | ||| | ||||||||| || || || || || |||||||| | Sbjct 34406988 TGCCACCACGTAGACGAAGAACCAGATGAAGGGTGGATTCCTTCTGAATATTGTAATCAG 34406929 Query 15007 CTGAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGT 15064 || ||| || | || || | |||||||| ||| | || | | ||| || || Sbjct 34406928 CT---AATGTACGACCATCCTCAAGCTGTTTGCCCGCGAAGATAAGCCTCTGCTGATCAG 34406872 Query 15065 TTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTT 15124 ||||| ||||||||||| ||| || || ||| | || || || || ||| Sbjct 34406871 GAGGAATGCCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCAATGGTGTCAGAGCTTT 34406812 Query 15125 CTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || |||||||||||||| || || || || ||||| ||||| || ||||| Sbjct 34406811 CAACTTCTAAGGTAATGGTCTTGCCAGTGAGTGTTTTAACAAAGATCTGCAT 34406760 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||| | | || ||||||||||| || || || || ||||| || || Sbjct 34407214 CCACCACGCAGGCGGAGCACCAAATGAAGGGTTGACTCCTTCTGGATGTTATAGTCAGCA 34407155 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | ||||||| | || || ||||| | || | | ||| ||||| ||| Sbjct 34407154 AGAGTACGGCCGTCTTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCCGGTGGG 34407095 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || ||||| || ||| || ||| ||| | || ||||| || |||| || Sbjct 34407094 ATACCCTCCTTATCCTGAATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCAACT 34407035 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||||||||| || || || || || || || |||||||| ||||| Sbjct 34407034 TCTAAGGTAATAGTCTTTCCAGTAAGGGTCTTAACAAAAATCTGCAT 34406988 >seq1 Length=51465339 Score = 98.7 bits (108), Expect = 7e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| ||||| || || || ||||||||||| ||| | || ||||||| ||||| Sbjct 45561447 TGAAGTGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTCCTGCCGTCTTCCAATTGC 45561388 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || ||||| | ||||||||||| || || ||| |||||||||||||| ||| || Sbjct 45561387 TTTCCAGCAAAGATCAAACGCTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGAATCTTA 45561328 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || || || | || || || | ||||| || || || ||| Sbjct 45561327 GCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACCTCAAGAGTAATAGTCTTTCCGGTC 45561268 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 | || || ||||| || |||||| Sbjct 45561267 AAGGTCTTGACAAAGATCTGCATA 45561244 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 || || || ||||||||||| || || || || |||||||| || | || | || Sbjct 45561684 AACACCAAGTGAAGGGTAGACTCCTTCTGGATATTGTAATCTGCAAGGGTCCTTCCATCC 45561625 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || | || || ||||| | ||||| | ||| || || ||||| |||||||| || Sbjct 45561624 TCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGAGGAATACCTTCCTTATCC 45561565 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||| ||| || ||| | || || || ||| | || || || ||||| || || Sbjct 45561564 TGAATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCCACTTCCAAGGTGATAGTC 45561505 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || |||||||| || ||||| || |||||| Sbjct 45561504 TTTCCAGTCAGAGTCTTAACAAAGATCTGCATA 45561472 >seq15 Length=668940 Score = 82.4 bits (90), Expect = 5e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | | || || | ||| | || || || || || ||||||||||| Sbjct 334919 TGCCACCACGAAGACGCAACACAAGATGGTGTGTGGACTCCTTCTGGATGTTGTAATCAG 334860 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 || | || |||| || ||||| || ||||| | ||||||||||| ||||| | Sbjct 334859 CCAGGGTCCTGCCGTCCTCCAATTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGCG 334800 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| ||||||||||| || || || || | || || ||||| | || | Sbjct 334799 GAATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTATCTGAGCTCTCAA 334740 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || | ||||| || || ||||||| || || ||||| || |||||| Sbjct 334739 CTTCGAGAGTAATAGTCTTCCCTGTCAAGGTCTTGACAAAGATCTGCATA 334690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357370979319410