Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq4825 715 0.0 seq6 453 1e-122 seq8 378 9e-100 seq36 178 2e-39 seq4 168 8e-37 seq1 131 2e-25 seq2 93.3 5e-14 seq9 89.7 6e-13 >seq4825 Length=155848 Score = 715 bits (792), Expect = 0.0 Identities = 756/993 (76%), Gaps = 2/993 (0%) Strand=Plus/Plus Query 7529 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATG 7588 ||| ||||||| | ||| ||||||||||| ||||||||||| |||||||| |||||||| Sbjct 286 TCAACAGCAGCTAAGTCTAGAGGGAAGTTATGAGCATTACGTTCGTGCATAACTTCCATA 345 Query 7589 CCAAGACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCA 7648 ||||| ||| ||||| | | || ||||| || || | ||||| ||||||| |||| Sbjct 346 CCAAGGTTAGCGCGGTTAATGATATCAGCCCAAGTATTAATTACACGGCCTTGACTATCA 405 Query 7649 ATGATGGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGA 7708 | | || |||||||| |||||||| || |||||||| ||||| ||||| | ||| | | Sbjct 406 ACTACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCTAAA 465 Query 7709 GCAGTGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAG 7768 ||||| |||||||| || || || ||||| || || ||||||||||| | ||||| ||| Sbjct 466 GCAGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAG 525 Query 7769 TTGTTGAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATG 7828 |||||||| ||| ||||||||||| | || ||||| || || ||||| || ||||| Sbjct 526 TTGTTGAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCTACGATA 585 Query 7829 TTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTG 7888 || || || ||||||||||| |||||| | ||||| | || || ||| || ||| Sbjct 586 TTATAAGTTTCTTCTTCTTGCCCGAACCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 645 Query 7889 GTTTCACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCA 7948 ||||| | | || | ||||||||| | ||||||||||| ||||| || || ||||| Sbjct 646 GTTTCCCTGATCAAACTAGAGGTTACCAAAGAACCATGCATAGCACTAAATAGGGAACCG 705 Query 7949 CCAAAGACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCT 8008 || || |||||||| ||||| | |||||| || |||||||| |||||||||||||| || Sbjct 706 CCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCC 765 Query 8009 TGGAAGACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAA 8068 ||||| |||| |||| ||||||| ||||||||||| || ||||||||| | ||||| || Sbjct 766 TGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAG 825 Query 8069 GAACCTTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAG 8128 |||||||||| || |||| | ||| ||||||| || || ||||| ||||| || Sbjct 826 CTTCCTTGACCGATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAA 885 Query 8129 TATGCTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCC 8188 ||||| ||| ||||| || ||||||||||||||| || ||| ||||||||||||||| Sbjct 886 TATGCAACAGCAATCCAAGGTCGCATACCTAGACGGAAACTAAGCTCCCACTCACGACCC 945 Query 8189 ATGTATGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTG 8248 ||||| | | ||| | | ||||| | | | | || |||||||||||||| Sbjct 946 ATGTAACAAGCTACACCAAGTAAAAAGTGTAGAACGATTAATTCATAAGGACCACCGTTG 1005 Query 8249 TAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCG 8308 || | ||| ||||||| |||||| ||||||||||| ||||| ||||| | ||| ||||| Sbjct 1006 TATAACCATTCATCAACAGAAGCCGCTTCCCAGATTGGATAAAAGTGCAAACCTATAGCT 1065 Query 8309 TTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCG 8368 ||||| |||| || ||||| || || || ||||||||||| | || || |||| Sbjct 1066 GCAGAAGTCGGAATAATGGCACCGGAAATAATATTGTTGCCATAAAGTAGAGATCCAGAA 1125 Query 8369 ACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA- 8427 || |||||||| || || ||||| || || ||||||||||| | ||| |||| || || Sbjct 1126 ACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAAT 1185 Query 8428 ACAAATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAG 8487 ||| | || || | | | ||||| ||||||| ||||| ||||| || | || || Sbjct 1186 ACAGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAG 1244 Query 8488 ACGATTGTTGGTGGAGGTTACCCAGTTACAGAA 8520 ||| || | |||| ||||| |||||||||||| Sbjct 1245 ACGGTTTTCGGTGCTGGTTATCCAGTTACAGAA 1277 Score = 545 bits (604), Expect = 3e-150 Identities = 731/1014 (72%), Gaps = 2/1014 (0%) Strand=Plus/Minus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | || | || || ||||| |||| || ||||||||| || ||||| Sbjct 34151 AGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 34092 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | |||||||| ||||| | |||||| || || || || || || || ||||| ||| Sbjct 34091 TGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTTGTGTAGAAAGTC 34032 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || || ||||| || || || | || || || ||||| |||||||| || | ||| Sbjct 34031 TCAAATTCAGGATCTTCTGCCGCGCGAATTTCCTGAGAAACGAAGTCATAGGCGCGCAGG 33972 Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502 || || || ||||||| | |||| | |||| | ||| | || || ||||| Sbjct 33971 TTCAGGGCCAGACCAACTACTCCAAGAGCACTCATCCATAAACCAGTTACTGGTACAAAT 33912 Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562 | |||||||||||||| |||||| |||||| || || | |||||||| || ||||| Sbjct 33911 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGGACCAA 33852 Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTG 6622 || || || || |||||||| ||||| || || || |||| || || | ||| || | Sbjct 33851 AAGCGGTTCGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCACGG 33792 Query 6623 AAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682 || ||||||| |||||||||||||| |||||||| |||||||||||||| |||||| Sbjct 33791 AATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCATGAATA 33732 Query 6683 GCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGC 6742 || || ||||| || | || || | ||||| || |||||||||||||| ||||| | Sbjct 33731 GCGCATAGCAAAGCAGCGCCCAATACCCCTGCAACTCCCATCATATGAAATGGGTTTAAT 33672 Query 6743 GTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAAC 6802 ||||| || || || || || | ||||| | ||| || ||||| ||||| |||||||| Sbjct 33671 GTCCAATTATGAAATCCTTGAAAAAAGAGGATGAATCGAAATATAGCTGCTACACCAAAA 33612 Query 6803 GACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAG 6862 |||||||||||||||| || ||||| || ||||| || || || ||||| ||||| Sbjct 33611 CTTGGCGCAAAGAACCAACCAGATTGTCCTAGTGGATAAATCAGGAATACAGAAACAAAA 33552 Query 6863 ACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGC 6921 |||||||| ||||||||||||||||||||||| || || || | | || ||| || || Sbjct 33551 ACAGCAATTGGACCAGAAAACGCGATTGCATTATAAGGTCGCA-ATTGAACAGATCGAGC 33493 Query 6922 GATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAA 6981 | || || || || | |||||| ||||| || | || || || ||||| || ||||| Sbjct 33492 AAGTTCGAATTGACGTAACATGAAGCCTATTAGTCCGAAAGCACCATGGAGGGCAACAAA 33433 Query 6982 AGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCA 7041 || ||| || || || | ||| ||| || ||||| || || ||||| |||||||| Sbjct 33432 AGTCCACAGACCACCTAATTGACACCAACGAGTAAAATCCCCTTGTGCTTCAGGACCCCA 33373 Query 7042 TAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAA 7101 || | | | |||||| | | | | ||||||||| || || || ||||| | ||| Sbjct 33372 CAGTAACAACAAAGAATGTGCTAAACTATTAGCAGGAGTAGAAACTGCGGCAGTTAAGAA 33313 Query 7102 ATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGT 7161 ||| || || || | ||| ||| || | || || || ||||| || || || || Sbjct 33312 ATTGCAGCCTTCCAAATAGGAACTGGCCAATCCATGGGTATACCATGAAGTTACAAAGGT 33253 Query 7162 TGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTGA 7221 ||| || |||| ||| || || | || | || ||| ||| || || | ||||| || Sbjct 33252 TGTACCTGTGAACCAGCCTCCTACAGCGAAATAGGCACAAGGAAAGAGCAATAGACCGGA 33193 Query 7222 CCAACCAACAAAAACGAACCTATCACGCTTAAGCCAGTCATCGAGTACATCAAA 7275 ||| || ||||||||||| | || | | | ||||||||| | | |||||| Sbjct 33192 CCATCCTACAAAAACGAAACGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 33139 >seq6 Length=36610139 Score = 453 bits (502), Expect = 1e-122 Identities = 463/603 (77%), Gaps = 1/603 (0%) Strand=Plus/Minus Query 7580 ACTTCCATGCCAAGACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCT 7639 || ||||| ||||| ||| ||||| | | || ||||| || || | ||||| ||| Sbjct 34153092 ACCTCCATACCAAGGTTAGCGCGGTTAATGATATCAGCCCAAGTATTAATTACACGGCCT 34153033 Query 7640 TGACCATCAATGATGGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTA 7699 |||| ||||| | || |||||||| |||||||| || |||||||| ||||| ||||| Sbjct 34153032 TGACTATCAACTACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTG 34152973 Query 7700 ACACCAAGAGCAGTGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGC 7759 | ||| | |||||| |||||||| || || || ||||| || || ||||||||||| | Sbjct 34152972 ATACCTAAAGCAGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAA 34152913 Query 7760 GAACGGGAGTTGTTGAACGAAGCGTATTGGAAGATCAGACG-ACCAAAGTATCCGTGAGC 7818 ||||| ||||||||||| ||| ||||||||||| | || |||||| || || ||||| Sbjct 34152912 GAACGAGAGTTGTTGAAACTAGCATATTGGAAGATTAATCGGACCAAAATAACCATGAGC 34152853 Query 7819 AGCAACGATGTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTC 7878 || ||||| || || || ||||||||||| |||||| | ||||| | || || || Sbjct 34152852 GGCTACGATATTATAAGTTTCTTCTTCTTGCCCGAACCTGTAACCTTCATTAGCAGATTC 34152793 Query 7879 AGACTCAGTGGTTTCACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAA 7938 | || |||||||| | | || | ||||||||| | ||||||||||| ||||| || Sbjct 34152792 ATTTTCTGTGGTTTCCCTGATCAAACTAGAGGTTACCAAAGAACCATGCATAGCACTAAA 34152733 Query 7939 CAGAGAACCACCAAAGACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTT 7998 || ||||| || || |||||||| ||||| | |||||| || |||||||| |||||||| Sbjct 34152732 TAGGGAACCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTT 34152673 Query 7999 GTGCTCTGCTTGGAAGACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGC 8058 |||||| || ||||| |||| |||| ||||||| ||||||||||| || ||||||||| | Sbjct 34152672 GTGCTCAGCCTGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACC 34152613 Query 8059 GTCAGAGAAAGAACCTTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAAC 8118 ||||| || |||||||||| || |||| | ||| ||||||| || || ||||| Sbjct 34152612 ATCAGAAAAGCTTCCTTGACCGATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAAC 34152553 Query 8119 TGGAGCAGAGTATGCTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCA 8178 ||||| || ||||| ||| ||||| || ||||||||||||||| || ||| |||| Sbjct 34152552 AGGAGCTGAATATGCAACAGCAATCCAAGGTCGCATACCTAGACGGAAACTAAGCTCCCT 34152493 Query 8179 CTC 8181 ||| Sbjct 34152492 CTC 34152490 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 7529 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATG 7588 ||| ||||||| | ||| ||||||||||| ||||||||||| |||||||| |||||||| Sbjct 7295972 TCAACAGCAGCTAAGTCTAGAGGGAAGTTATGAGCATTACGTTCGTGCATAACTTCCATA 7295913 Query 7589 CCAAG 7593 ||||| Sbjct 7295912 CCAAG 7295908 >seq8 Length=31745509 Score = 378 bits (418), Expect = 9e-100 Identities = 362/464 (78%), Gaps = 0/464 (0%) Strand=Plus/Minus Query 7730 ACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAACGAAGCGTATTGG 7789 || ||||| || || ||||||||||| | ||||| ||||||||||| ||| |||||| Sbjct 5169176 ACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGG 5169117 Query 7790 AAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTAGGTCTCTTCTTCTTGA 7849 ||||| | || ||||| || || ||||| || ||||| || || || ||||||||||| Sbjct 5169116 AAGATTAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAAGTTTCTTCTTCTTGC 5169057 Query 7850 CCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTCACGAACCAGAGAAGAG 7909 |||||| | ||||| | || || ||| || |||||||| | | || | |||| Sbjct 5169056 CCGAACCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAG 5168997 Query 7910 GTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAAGACACCAGCGACGCCC 7969 ||||| | ||||||||||| ||||| || || ||||| || || |||||||| ||||| Sbjct 5168996 GTTACCAAAGAACCATGCATAGCACTAAATAGGGAACCGCCGAATACACCAGCTACGCCT 5168937 Query 7970 AGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAAGACAAGCATGTAGTTG 8029 | |||||| || |||||||| |||||||||||||| || ||||| |||| |||| ||||| Sbjct 5168936 AACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAAGTTG 5168877 Query 8030 AACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACCTTGACCGAAAGGATAG 8089 || ||||||||||| || ||||||||| | ||||| || |||||||||| || ||| Sbjct 5168876 AAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAGCTTCCTTGACCGATTGGGTAG 5168817 Query 8090 ACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGCTACACAGATCCAGGGA 8149 | | ||| ||||||| || || ||||| ||||| || ||||| ||| ||||| || Sbjct 5168816 ATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGT 5168757 Query 8150 CGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGTA 8193 ||||||||||||||| || ||| |||||||||||||||||||| Sbjct 5168756 CGCATACCTAGACGGAAACTAAGCTCCCACTCACGACCCATGTA 5168713 Score = 131 bits (144), Expect = 2e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 8291 AAGTGGAGACCAATAGCGTTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCA 8350 ||||| | ||| ||||| ||||| |||| || ||||| || || || ||||||||| Sbjct 2878914 AAGTGCAAACCTATAGCTGCAGAAGTCGGAATAATGGCACCGGAAATAATATTGTTGCCA 2878855 Query 8351 TACATGAGCGAACCAGCGACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCG 8410 || | || || |||| || |||||||| || || ||||| || || ||||||||||| Sbjct 2878854 TAAAGTAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCA 2878795 Query 8411 ACGAAAGCGACGATGAA-ACAAATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACC 8469 | ||| |||| || || ||| | || || | | | ||||| ||||||| ||||| Sbjct 2878794 ATGAAGGCGATAATAAATACAGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACC 2878736 Query 8470 GAACCAACCGACATACAGACGATTGTTGGTGGAGGTTACCCAGTTACAGAA 8520 ||||| || | || ||||| || | |||| ||||| |||||||||||| Sbjct 2878735 AAACCATCCAATGTAAAGACGGTTTTCGGTGCTGGTTATCCAGTTACAGAA 2878685 >seq36 Length=917149 Score = 178 bits (196), Expect = 2e-39 Identities = 213/287 (74%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 8235 AAGGACCACCGTTGTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGT 8294 |||||||||||||||| | ||| ||||||| |||||| ||||||||||| ||||| |||| Sbjct 329712 AAGGACCACCGTTGTATAACCATTCATCAACAGAAGCCGCTTCCCAGATTGGATAAAAGT 329771 Query 8295 GGAGACCAATAGCGTTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACA 8354 | | ||| ||||| ||||| |||| || ||||| || || || ||||||||||| | Sbjct 329772 GCAAACCTATAGCTGCAGAAGTCGGAATAATGGCACCGGAAATAATATTGTTGCCATAAA 329831 Query 8355 TGAGCGAACCAGCGACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGA 8414 || || || | || |||||||| || || ||||| || || |||||| || | || Sbjct 329832 GTAGAGATCCTGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAATGGCAATGA 329891 Query 8415 AAGCGACGATGAA-ACAAATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAAC 8473 | |||| || || ||| | || || | | | ||||| ||||||| ||||| ||| Sbjct 329892 AGGCGATAATAAATACAGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAAC 329950 Query 8474 CAACCGACATACAGACGATTGTTGGTGGAGGTTACCCAGTTACAGAA 8520 || || | || ||||| || | |||| ||||| | |||||||||| Sbjct 329951 CATCCAATGTAAAGACGGTTTTCGGTGCTGGTTATCTAGTTACAGAA 329997 >seq4 Length=35924511 Score = 168 bits (186), Expect = 8e-37 Identities = 186/248 (75%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 7529 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATG 7588 ||| ||||||| | ||| |||| |||||| ||||||||| | ||| |||| ||||| | Sbjct 4757475 TCAACAGCAGCTAAGTCTAGAGAGAAGTTATGAGCATTATGTTCGAGCATAACTTCTTTA 4757416 Query 7589 CCAAGACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCA 7648 |||||| ||| ||||| | | || || || || || | |||| |||||| |||| Sbjct 4757415 CCAAGATTAGCGCGGTTAATGATATCAGCTCAAGTATTAATTACACAGGCTTGACTATCA 4757356 Query 7649 ATGATGGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGA 7708 | | || |||||||| |||||| | || |||||||| | ||| ||||| | ||| | | Sbjct 4757355 ACTACAGATTGGTTGAAATTGAAATCATTTAGGTTGAAAGTCATAGTGCTGATACCTAAA 4757296 Query 7709 GCAGTGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAG 7768 ||||| |||||||| | | || ||||| || || ||||||||||| | ||||| ||| Sbjct 4757295 GCAGTAAACCAGATACTTATTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAG 4757236 Query 7769 TTGTTGAA 7776 |||||||| Sbjct 4757235 TTGTTGAA 4757228 Score = 100 bits (110), Expect = 4e-16 Identities = 96/122 (79%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 6782 AATATCGCTGCAACACCAAACGACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAC 6841 ||||| | ||| | |||||| || |||||||||| |||| || |||| || ||||| Sbjct 12713274 AATATAGATGCTAAACCAAA--ACTGCGCAAAGAATCAACCAGATTGTCATAGTGGATAA 12713331 Query 6842 ATGAGAAAGACAGACACAAAGACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGA 6901 || || || ||| | ||||| ||| |||| ||||||||||||||||||||||| || || Sbjct 12713332 ATCAGGAATACATAAACAAAAACAACAATCGGACCAGAAAACGCGATTGCATTATAAGGT 12713391 Query 6902 CG 6903 || Sbjct 12713392 CG 12713393 >seq1 Length=51465339 Score = 131 bits (144), Expect = 2e-25 Identities = 229/336 (68%), Gaps = 33/336 (10%) Strand=Plus/Minus Query 7529 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATG 7588 ||| ||||||| | ||| ||||||||||| |||||||||| || || Sbjct 27733459 TCAACAGCAGCTAAGTCTAGAGGGAAGTTATGAGCATTAC--------ATTAC------- 27733415 Query 7589 CCAAGACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCA 7648 |||| ||||||||| | || ||||| || || | |||| |||||| |||| Sbjct 27733414 -CAAGCTTAGCACGGTTATCGATATCAGCCCAAGTATTAATTACACAGTCTTGACTATCA 27733356 Query 7649 ATGATGGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGA 7708 | | || |||||||| ||||||| || || ||||| ||||| ||||| | ||| | Sbjct 27733355 ACTACAGATTGGTTGAAACTGAAACCATTTAGATTGAAAGCCATAGTGCTGATACCTTAA 27733296 Query 7709 GC-AGTGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGA 7767 || ||| |||||||| |||||| ||||||||||| | ||| | || Sbjct 27733295 GCTAGTAAACCAGAT----ACAACT------------AGGAAGAAGTGTAAAGAATGAGA 27733252 Query 7768 GTTGTTGAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGAT 7827 ||||||||| ||| ||||||| || | ||||||| || || |||| | ||||| Sbjct 27733251 GTTGTTGAAACTAGCAGATTGGAATATTAATCGACCAATATAACCATGAGTGGGTACGAT 27733192 Query 7828 GTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACC 7863 || | | ||||||||||| |||||| | ||||| Sbjct 27733191 ATTACAAGCTTCTTCTTCTTGCCCGAACCTGTAACC 27733156 >seq2 Length=43913520 Score = 93.3 bits (102), Expect = 5e-14 Identities = 162/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 10203 TCAGTAAAGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAAC 10262 ||| ||||| ||| ||||||| | | | |||| |||| | ||||| || || || Sbjct 22638496 TCAATAAAGATCACTTTCTTTGTGGGTATGGATCACAGAATCACAAGTGGGGTACGAGAC 22638437 Query 10263 ACAGGTCAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTTG 10322 |||||||| | |||| | | || |||| || || || || ||| ||| || Sbjct 22638436 ACAGGTCAACAAATAACCTTCTTTCATTTGGTTCTCGTCGAGAAAGGATCCATCTGACTG 22638377 Query 10323 ATCTACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGA 10382 || || | ||||| | | ||| || ||||| | ||||| ||||| |||| ||| || Sbjct 22638376 GTCAACAGCTCCCGACACCACTTTACCGGCACAGGTGGAACATGCACCTGCTCTGCAGGA 22638317 Query 10383 GTAGTTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTACTGATCGTCAG 10438 || || ||||| ||||| || ||||||||||| |||||||| ||| |||| Sbjct 22638316 ATATGGAAGCTCAATCCCTGCCTCCTCAGCAGCATCTAGAATGTAAGTATCATCAG 22638261 >seq9 Length=33682890 Score = 89.7 bits (98), Expect = 6e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 10252 GGATAAGAAACACAGGTCAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGAT 10311 ||||||| ||||| || |||| |||| ||||| | ||| ||||||||||| || Sbjct 3993020 GGATAAGCCACACAAGTGAGAACATAACCCGCATCCACCTGTTCATCATCAAGAAAGCTC 3992961 Query 10312 TGATCGCTTTGATCTACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCA 10371 || || |||||| |||| ||||| | | ||| |||| |||||| || || | || Sbjct 3992960 TGGTCTGATTGATCCACCGAGCCCGAAACAACTTTTCCTGTACAACTAGAGCATGACCCT 3992901 Query 10372 GCTCGGCACGAGTAGTTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTACTGA 10431 |||| ||| ||| || || || || || ||||||||| || |||||||||| | Sbjct 3992900 GCTCTGCAAGAGAAGGGAAGATCGATTCCCTTCTCTTCAGCATAGTCGAGAATGTACTCA 3992841 Query 10432 TC 10433 || Sbjct 3992840 TC 3992839 Score = 89.7 bits (98), Expect = 6e-13 Identities = 142/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 10249 GTGGGATAAGAAACACAGGTCAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAAC 10308 || ||||||| ||||| || |||| ||||||| | ||||||||||||||||| || Sbjct 3994587 GTAGGATAAGCCACACAAGTGAGAACATAACCAGCCTTCATCTGGTCATCATCAAGAAAG 3994528 Query 10309 GATTGATCGCTTTGATCTACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCA 10368 || || |||||| | || || || | | ||| || | |||||| || || | Sbjct 3994527 CTCTGGTCTGATTGATCCAGTGTGCCTGAAACAACTTTCCCGGTACAACTAGAGCATGAC 3994468 Query 10369 CCAGCTCGGCACGAGTAGTTGAGGTC-AATGCCTGCTTCTTCAGCAGCATCCAGAATGTA 10427 || |||| ||| |||||| || || | | ||||| ||||||||| || |||||||| Sbjct 3994467 CCTGCTCTGCAAGAGTAGGGAAGATCGATTCCCTGC-TCTTCAGCATGGTCGAGAATGTA 3994409 Query 10428 CTGATCGTCAGCACACTCAAA 10448 ||| || | |||||| || Sbjct 3994408 TGCATCTTCTGGACACTCGAA 3994388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622087270321440