Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 143 3e-29 seq3 138 1e-27 seq6 132 5e-26 seq2 125 7e-24 seq7 120 3e-22 >seq1 Length=51465339 Score = 143 bits (158), Expect = 3e-29 Identities = 171/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||||||||| ||||| ||||||||||||||| | || || || || | Sbjct 30446454 AATGCAGATCTTCGTAAAAACCCTCACCGGCAAAACCATCACCCTGGAGGTGGAATCCTC 30446395 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||||| | | | | | |||| ||||||| |||||||| || || || ||||||| Sbjct 30446394 CGACACCATCGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATCCCTCCCGACCA 30446335 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || ||||| | ||| || |||||||| || |||| | ||||| ||||||||| Sbjct 30446334 GCAACGCCTCATCTTCGCCGGAAAACAGCTCGAGGACGGCAGAACCCTAGCCGACTACAA 30446275 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCCGC 38474 |||||| |||||| | || || || | || || || | | |||||| || Sbjct 30446274 CATCCAGAAGGAATCCACTCTCCACCTCGTCCTCCGCCTCCGCGGCGGCGGC 30446223 Score = 143 bits (158), Expect = 3e-29 Identities = 398/606 (66%), Gaps = 7/606 (1%) Strand=Plus/Plus Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 ||| ||| || |||||||| |||||||| ||||| || | ||||| || || || | Sbjct 39365686 ACAACAAACACGCAAAGTCACAATGCAATCCCTCATCTCGCGAAATCAGCTCATTCGAGT 39365745 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 | ||||| || ||||| || || | || || | |||||| | ||| ||||| |||| Sbjct 39365746 AGGTCAATCCAGGCATCAGCCCTCTCTTCTTCAACCAAAACACCGCGCAAAAACTCCCCG 39365805 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066 | || || | || || || || || ||||| | | ||| |||| | || Sbjct 39365806 AGAAAAAAATCCCTTCCACACAAGCAAACGCCACAATCCTCTCCGCGAAACACTCCCCT- 39365864 Query 133067 TGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGA 133126 | | ||||| | ||||||||| | ||||| | ||| ||||| ||||| || | Sbjct 39365865 --CCATCAATCCACCTCAGCGCCCAATTCGCCTTCCTCTCGACACACGGAATCGTCTCAA 39365922 Query 133127 TGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCG 133186 | || | ||||| | ||||| ||| ||| || || || | || Sbjct 39365923 TCGCCCTAAACAACCTACTCTTCTCACACGAATCCTTCACATACGTCTCAAGAAGCAAAC 39365982 Query 133187 AATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCT 133246 |||||| ||||| |||| ||||| || ||||| || |||||||| || || |||| Sbjct 39365983 TATACATCTCCGAATGTATATTCTCGATCGCGATCTGGAAGCCGTAGAACGCCCTAGCCT 39366042 Query 133247 CGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGC 133306 | ||||||| || || | ||| | || | ||||| ||| ||||||||||| Sbjct 39366043 CCGCCACCTGGACCTCCTTCATGAACCTGCCGGCGAGATTCTCGAGCACGATGCCGTCAG 39366102 Query 133307 TGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTC-GTTCAAGCGC 133365 |||||||| || || |||||||| ||| ||| || ||||||| ||| || | Sbjct 39366103 AAGCGGCGAAGAAAGCGAGCACGTGAGTGACGAAGTGTTTCTCGTTGGGAGTT--AGGGT 39366160 Query 133366 TCCCAGTCGCGC-GTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTC 133424 | | | || ||||| | || | || || || ||| ||||||| || || ||||| Sbjct 39366161 TTGGAAATGAGCAGTGTCTTGCGATAAATCGACTTCTTCGGCGGTCCAGAAGGAAGCCTC 39366220 Query 133425 GGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCG 133484 |||||| |||||||| ||| || | | ||||| || || || || |||||| Sbjct 39366221 GGCTTTCTTGTACATTTCCCAGATTTGGGGGTATTGGATAGGGAACATGCAGAACCGGTC 39366280 Query 133485 GGGGTT 133490 ||||| Sbjct 39366281 CGGGTT 39366286 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || ||||||||| | || |||||| | | Sbjct 45560561 ATGCAGATCTTCGTCAAGACTTTGACAGGGAAGACCATCACCCTTGAAGTCGAGAGCTCT 45560620 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| |||||| | ||||| Sbjct 45560621 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 45560680 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | || || || ||||| || || | | ||||| |||||||||| Sbjct 45560681 CAGAGGTTGATCTTTGCTGGTAAGCAGCTTGAGGATGGCAGGACCCTTGCCGACTACAAC 45560740 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||||| ||||| | || || || ||||| || Sbjct 45560741 ATCCAGAAGGAGTCAACTCTCCACTTGGTCCT 45560772 >seq3 Length=50312079 Score = 138 bits (152), Expect = 1e-27 Identities = 371/560 (66%), Gaps = 8/560 (1%) Strand=Plus/Minus Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 ||| || || ||||| || ||||||| ||||| ||||| ||||| || || || || Sbjct 34659068 ACAACATACATGCAAAATCACAATGCAGACCCTCATCCCTCGAAATCAGCTCATTCGAGA 34659009 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 ||||||| |||||||| || || | || || |||||||| || ||| ||| || |||| Sbjct 34659008 AAGTCAATCCGGGCATAAGCCCCCTCTTCTTCAGCCAAAAAATCGCGCAGAAGCTCCCCG 34658949 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066 | || || | || || || || || || | | | ||| | |||| | || Sbjct 34658948 AGAAAAAAATCCCTTCCACACAAGCAAACGCAATAATCCTCTCCGCAAACGACTCCCCT- 34658890 Query 133067 TGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGA 133126 | | ||||| | || |||||| | |||||| | | ||| ||||| ||||| || | Sbjct 34658889 --CCATCAATCCACCTCATCGCCCACTTGGCCTTCTTCTCGACACACGGAATCGTCTCAA 34658832 Query 133127 TGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCG 133186 | || | ||||| | ||||| ||||| | || | || | | Sbjct 34658831 TCGCCCTGAACAACCTCGCCTTCTCCTCCGAATCCTTAATATAACTCTCCAACAACAAAC 34658772 Query 133187 AATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCT 133246 |||||| ||||| || | ||||| || || || ||||| || ||||| || ||||| Sbjct 34658771 TATACATCTCCGAATGAATATTCTCTATCGCAATCTGAAACCCATAAAAAGCCCTCGCCT 34658712 Query 133247 CGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGC 133306 | |||||||||| || | || | | || ||| ||| ||| || ||||| || Sbjct 34658711 CCGCCACCTGCACCTCCTTCATAAACCTCCCGGCCAAATTCTCGAGCACAATGCCATCAG 34658652 Query 133307 TGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGT-TGTCGTTCAAGCGC 133365 ||||||||||| || || || || | || || || ||| | | || |||| Sbjct 34658651 AAGCGGCGAAAAAAGCGAGAACATGGGTAATAAAGTGCTTCTCATCAGAAGTCAAAGC-T 34658593 Query 133366 TCCCAGTCGCGCGTGTCCTTG-GACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTC 133424 ||||||| | | | |||| || | || || |||||| ||||||| || || ||||| Sbjct 34658592 TCCCAGT-GAACATTATCTTGAGATAAATCGACTTCCTCGGCGGTCCAGAAAGAGGCCTC 34658534 Query 133425 GGCTTTTTTGTACATACTCC 133444 |||||| |||||||| |||| Sbjct 34658533 GGCTTTCTTGTACAT-CTCC 34658515 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || |||||||| || || || || || || ||||| | || || || | Sbjct 6143495 AATGCAGATTTTCGTAAAGACCCTTACCGGAAAGACTATCACTCTAGAAGTTGAAAGTTC 6143554 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | | |||| || |||| ||||| ||||| || || | ||||| Sbjct 6143555 TGATACTATTGATAATGTCAAAGCTAAGATCCAGGACAAGGAGGGTATCCCACCAGACCA 6143614 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| ||||||||| || ||||| ||||| || || | ||| ||||| ||||| || Sbjct 6143615 GCAGAGGCTCATTTTTGCTGGCAAGCAGCTCGAAGATGGGCGTACCCTTGCTGACTATAA 6143674 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| |||||| | || || ||||||||||| || Sbjct 6143675 CATCCAGAAGGAATCAACCCTCCATTTGGTGCTCCG 6143710 >seq6 Length=36610139 Score = 132 bits (146), Expect = 5e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || || || ||||||||| | || || || | | Sbjct 34641574 ATGCAGATCTTTGTTAAGACACTTACTGGAAAGACCATCACCCTAGAAGTTGAAAGCTCT 34641633 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | |||||| || |||| ||||| ||||| || ||| | ||||| Sbjct 34641634 GACACTATTGATAATGTTAAAGCTAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 34641693 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | ||||||| || ||||| |||||||| |||| |||||||| ||||||||| Sbjct 34641694 CAGAGACTCATTTTTGCTGGCAAGCAGCTGGAAGACGGTCGCACCCTTGCTGACTACAAC 34641753 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| |||| || ||||||||||| ||| Sbjct 34641754 ATCCAGAAGGAATCGACCCTTCATTTGGTGCTCCGT 34641789 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || || || || || ||||| || |||||| | || || || | | Sbjct 34079126 ATGCAGATATTTGTTAAGACACTTACTGGCAAGACAATCACCCTAGAAGTTGAAAGCTCT 34079185 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| || |||| ||||| ||||| || ||| | ||||| Sbjct 34079186 GACACTATTGATAATGTCAAAGCTAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 34079245 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | ||||||| || ||||| |||||||| |||| |||||||| |||||||| Sbjct 34079246 CAGAGACTCATTTTTGCTGGCAAGCAGCTGGAAGACGGTCGCACCCTTGCTGACTACAAT 34079305 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| | || || ||||||||||| ||| Sbjct 34079306 ATCCAGAAGGAATCAACCCTTCATTTGGTGCTCCGT 34079341 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || || || || || || || || || |||||| | || || ||| | | Sbjct 34079353 AATGCAAATCTTTGTCAAGACCCTTACTGGAAAGACAATCACCTTGGAAGTAGAGAGCTC 34079412 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | | | |||| | ||| |||| ||||| ||||||||||| | || || Sbjct 34079413 CGATACGATCGACAATGTTAAGGCAAAGATCCAAGACAAGGAGGGAATTCCTCCAGATCA 34079472 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || || || ||| |||| |||| | ||| | || ||||| Sbjct 34079473 GCAGAGGTTGATATTTGCTGGGAAGCAGTTGGAGGACGGAAGGACCTTGGCAGATTACAA 34079532 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || |||||| | || || |||||||| || | |||| || || Sbjct 34079533 CATTCAGAAGGAATCCACTCTTCATTTGGTATTGAGGCTGAGGGGTGG 34079580 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || | || ||||| ||||||||| | || || ||| | | Sbjct 34079810 ATGCAAATCTTTGTGAAGACATTGACCGGCAAGACCATCACCTTGGAGGTTGAGAGCTCA 34079869 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | |||| | || | ||||||| |||||||||||||| || | || || Sbjct 34079870 GATACAATTGATAACG-TGAAGGCGAAAATCCAGGACAAAGAGGGAATCCCACCAGATCA 34079928 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | |||| || || || ||| |||| || | | ||||| |||||||| Sbjct 34079929 ACAGCGTTTGATTTTTGCTGGAAAGCAGTTGGAGGATGGAAGAACCCTGGCTGACTACAA 34079988 Query 38423 CATCCAAAAGGA 38434 |||||| ||||| Sbjct 34079989 CATCCAGAAGGA 34080000 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| ||||| ||||| ||||| ||| | || || || | | Sbjct 34406760 ATGCAGATCTTTGTTAAAACACTCACTGGCAAGACCATTACCTTAGAAGTTGAAAGCTCT 34406819 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| | || || | ||||| || || ||||| | || || Sbjct 34406820 GACACCATTGACAATGTTAAGGCTAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAG 34406879 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | ||||||||||||||| || || | || || | || ||||| Sbjct 34406880 CAGAGGCTTATCTTCGCGGGCAAACAGCTTGAGGATGGTCGTACATTAGCTGATTACAAT 34406939 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || |||||| | || || ||| |||| || ||| Sbjct 34406940 ATTCAGAAGGAATCCACCCTTCATCTGGTTCTTCGT 34406975 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || ||||| || || || || || ||| | || || ||| | | Sbjct 34641802 ATGCAAATCTTTGTCAAGACGCTTACTGGAAAGACAATTACCTTGGAGGTAGAGAGCTCT 34641861 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | |||| | ||| |||| ||||||||||||||||| | || || Sbjct 34641862 GATACAATTGACAATGTTAAGGCAAAGATCCAAGACAAAGAGGGAATTCCTCCAGATCAG 34641921 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | || || || ||| |||| |||| | || | || |||||| Sbjct 34641922 CAGAGGTTGATATTTGCTGGGAAGCAGTTGGAGGACGGAAGGACATTGGCAGATTACAAC 34641981 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || ||||||||| | || || |||||||| || | |||| || || Sbjct 34641982 ATTCAAAAGGAATCCACACTTCATTTGGTATTGAGGCTGAGGGGTGG 34642028 >seq2 Length=43913520 Score = 125 bits (138), Expect = 7e-24 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || ||||| ||||| || || ||||| |||||||| |||| |||||| | Sbjct 31249574 AAAATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATCACTCTCGAGGTCGAGTCT 31249633 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | || | || |||| |||||||| || || || | ||| Sbjct 31249634 TCGGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCTCCGGAC 31249693 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| ||||| | ||| || || |||||||| |||| | ||||| ||||||| Sbjct 31249694 CAGCAGCGCCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCAGAACCCTAGCCGACTAC 31249753 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCCGC 38474 |||||||| ||||| | || || || | || || ||| | | |||||| || Sbjct 31249754 AACATCCAGAAGGAGTCCACTCTCCACCTCGTCCTCCGTCTCCGCGGCGGCGGC 31249807 Score = 89.7 bits (98), Expect = 5e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| || ||||||||| | ||||||||| || | || | ||| || || Sbjct 39748118 AAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAACAGAGGTTGATCTTCGCTGGTAAG 39748177 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 ||| |||| |||| | ||||| ||||||||||||||| ||||| | || || ||| Sbjct 39748178 CAGTTGGAGGACGGCAGGACCCTTGCCGACTACAACATCCAGAAGGAGTCTACACTCCAT 39748237 Query 38448 TTGGTGCTGCGT 38459 | ||| ||||| Sbjct 39748238 CTTGTGTTGCGT 39748249 >seq7 Length=36358036 Score = 120 bits (132), Expect = 3e-22 Identities = 145/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| ||||| ||||| |||||||| |||||| | || || || || Sbjct 14364546 AAGATGCAGATCTTCGTGAAAACCCTCACCGGCAAAACTATCACCCTGGAGGTGGAATCC 14364605 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-A 38359 |||||| | | | | |||| || || | |||||||| || || ||||||| | Sbjct 14364606 TCCGACACAATCGACAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCAT-CCCGCCGGA 14364664 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| ||||| | ||| ||||| ||||| || |||| | ||||| |||||| Sbjct 14364665 CCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCAGAACCCTAGCCGACTA 14364724 Query 38420 CAACATCCAAAAGGA 38434 ||||||||| ||||| Sbjct 14364725 CAACATCCAGAAGGA 14364739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500142627075840