Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq4825 645 4e-180 seq6 403 2e-107 seq8 327 1e-84 seq4 168 8e-37 seq36 152 6e-32 seq4826 138 1e-27 seq1731 132 6e-26 seq3 114 2e-20 seq5 93.3 5e-14 seq2 93.3 5e-14 seq1 84.2 3e-11 >seq4825 Length=155848 Score = 645 bits (714), Expect = 4e-180 Identities = 748/1003 (75%), Gaps = 4/1003 (0%) Strand=Plus/Minus Query 179739 TGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 179798 |||| | |||||| | ||| ||||| ||| | ||||| || || | || ||||| Sbjct 1286 TGGGGTCGCTTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTT 1227 Query 179799 GGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCAT 179857 || ||| ||||||| || ||| | ||| | |||||| |||| || || |||||||||| Sbjct 1226 GGTGTTTTGATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCAT 1168 Query 179858 CGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTA 179917 |||||||| || || || || ||||| || |||||||| || |||| || || | || Sbjct 1167 TGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTA 1108 Query 179918 TGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTT 179977 ||| ||||| || || || ||||| || |||| |||| || || ||| | ||||| Sbjct 1107 TGGCAACAATATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCACTT 1048 Query 179978 CTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCA 180037 ||||| ||||||||||| || || |||| || ||| | || ||||||||||||| | Sbjct 1047 TTATCCAATCTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGTCCTTATGA 988 Query 180038 ACTTGTCGTCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACT 180097 | | |||| | ||||| | |||| | | |||||||||||||||||||| || Sbjct 987 ATTAATCGTTCTACACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCT 928 Query 180098 TTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCTG 180156 | || || | |||||||| || ||||| ||| || |||||||| ||||| || || | Sbjct 927 TAGTTTCCGTCTAGGTATGCGACCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCAG 869 Query 180157 CAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATGC 180216 | || ||||||| ||| | |||| || |||||||||| || ||||| | |||| Sbjct 868 CTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGC 809 Query 180217 CCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATCC 180276 | || || || ||||| || ||||||| |||| |||| ||||| || ||||||||||||| Sbjct 808 CTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCC 749 Query 180277 TGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCCG 180336 | |||||||| || |||||| | || ||||| ||||| ||||||||||| || || | Sbjct 748 TTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTG 689 Query 180337 CAATGCACGGTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCCC 180396 | ||||| ||||| |||| |||||| || | | |||||||| |||| ||| || Sbjct 688 CTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTG 629 Query 180397 AGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACATG 180456 || | ||||||| ||| || ||||||||||| || || || ||||| || || |||| Sbjct 628 CTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATG 569 Query 180457 GATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCACT 180516 | || || || || | |||||||| ||||| ||||||||||| ||||| | |||| Sbjct 568 GTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACT 509 Query 180517 TCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCA 180576 ||||||| || || |||||||| || || |||||||| ||||| | || | ||||| | Sbjct 508 TCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATCAGCACTA 449 Query 180577 TGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTG 180636 |||| |||||||| || |||||||| |||||||| || | ||||| ||||||| |||| Sbjct 448 TGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTG 389 Query 180637 TGCTCAACACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACG 180696 | | || |||||||| || | | ||||||||| || ||||||||||||||||||| Sbjct 388 TAATTAATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCACG 329 Query 180697 AGCGTAATGCTCACAACTTCCCACTTGACCTGGCAGCTGCTGA 180739 | ||||||||||| |||||||| || ||| | || |||| ||| Sbjct 328 AACGTAATGCTCATAACTTCCCTCTAGACTTAGCTGCTGTTGA 286 Score = 581 bits (644), Expect = 4e-161 Identities = 741/1015 (73%), Gaps = 4/1015 (0%) Strand=Plus/Plus Query 181424 TTTGACATCCTTGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 181483 ||||| || | ||||||||| | | ||||| || || ||||| || ||||| || Sbjct 33139 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGT 33198 Query 181484 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGGGGCTGGCTCACTGGCACTACTTTT 181543 ||| | || ||||| ||| ||| | || | || |||||| |||| || || || ||| Sbjct 33199 CTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGAGGCTGGTTCACAGGTACAACCTTT 33258 Query 181544 GTTACGTCGTGGTACACCCACGGATTGGCGTCTTCCTACCTTGAGGG-TGCTAATTTCCT 181602 || || || ||||| ||||| |||||||| |||||| | || || ||| |||||| | Sbjct 33259 GTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGC-AATTTCTT 33317 Query 181603 TACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 181662 || || || || || || |||||| | | | | |||||| | | |||| ||||| Sbjct 33318 AACTGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTGTGGGG 33377 Query 181663 TCCTGAAGCTCAGGGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGGCTTTTGT 181722 ||||||||| || || ||||| || ||| ||| | || || || ||| ||||||| Sbjct 33378 TCCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGT 33437 Query 181723 GGCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACTTGCTCG 181782 || ||||| || || |||| || || || || ||| | | ||||| ||||||||||| Sbjct 33438 TGCCCTCCATGGTGCTTTCGGACTAATAGGCTTCATGTTACGTCAATTCGAACTTGCTCG 33497 Query 181783 -TCTAATCGGAATCCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGCTGTATTCG 181841 ||| || | | ||||| || ||||| || || ||||| ||||| |||||||| || | Sbjct 33498 ATCTGTTCA-ATTGCGACCTTATAATGCAATCGCGTTTTCTGGTCCAATTGCTGTTTTTG 33556 Query 181842 TCTCTGTATTTCTCATCTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTTCG 181901 | |||||||| || || ||||| || |||||||| |||||||||||||||| ||||| | Sbjct 33557 TTTCTGTATTCCTGATTTATCCACTAGGACAATCTGGTTGGTTCTTTGCGCCAAGTTTTG 33616 Query 181902 GTGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCA 181961 |||| || || || || || ||| | ||||| | || || |||||||||||||| | | Sbjct 33617 GTGTAGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACATTAA 33676 Query 181962 ATCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAATTC 182021 | || || ||||||||||| ||||| || | |||| | || || || | || |||| Sbjct 33677 ACCCATTTCATATGATGGGAGTTGCAGGGGTATTGGGCGCTGCTTTGCTATGCGCTATTC 33736 Query 182022 ACGGTGTGACCGTGGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATACTTTCAAAG 182081 | |||| || || || |||||| | | | |||| ||||| |||||||| ||| | Sbjct 33737 ATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTG 33796 Query 182082 CATTCGATTCAACTCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGCTTCTGGT 182141 | || | ||||||||| |||||||| ||||||||||| || ||||||||||| |||| Sbjct 33797 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCGAACCGCTTTTGGT 33856 Query 182142 CTCAGATCTTCGGTATTGCGTTTAGCAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTG 182201 | || ||||| || |||| ||| |||||| | ||||| |||||||||||| | |||| Sbjct 33857 CCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 33916 Query 182202 TTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTC 182261 | || || | ||| | |||| ||| | | || | ||||||| || || ||||| | Sbjct 33917 TACCAGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTGC 33976 Query 182262 GTGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAGAAGACCCAGAGTTCGAGACGT 182321 | || |||||||| || || || ||||| | || ||||||| || || || ||||| | Sbjct 33977 GCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAGAAGATCCTGAATTTGAGACTT 34036 Query 182322 TCTACACAAAGAACATTCTCTTGAATGAAGGTCTGCGTGCATGGTTAGCACCAGTCGATC 182381 |||||||||| || |||||||| || |||||| | ||||| ||| | || | |||| Sbjct 34037 TCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATC 34096 Query 182382 AACCACATGAGAACTTTGTGTTCCCTGAGGAAGTATTACCCAGAGGTAACGCACT 182436 | || ||||| ||| || | ||||||||||| || ||||| | || ||||| || Sbjct 34097 AGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 34151 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 141253 ATTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAA 141312 ||||||||||||||||| || ||||| | || ||||||| | |||||||||||||| || Sbjct 109223 ATTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAA 109164 Query 141313 TCCTACCTGGGGAG 141326 |||||||||||||| Sbjct 109163 TCCTACCTGGGGAG 109150 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 141253 ATTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAA 141312 ||||||||||||||||| || ||||| | || ||||||| | |||||||||||||| || Sbjct 130818 ATTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAA 130877 Query 141313 TCCTACCTGGGGAG 141326 |||||||||||||| Sbjct 130878 TCCTACCTGGGGAG 130891 >seq6 Length=36610139 Score = 403 bits (446), Expect = 2e-107 Identities = 454/604 (75%), Gaps = 3/604 (0%) Strand=Plus/Plus Query 180087 GAGTGGGAACTTTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGC 180145 ||| |||| ||| || || | |||||||| || ||||| ||| || |||||||| || Sbjct 34152490 GAGAGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGAT-TGCTGTTGCATATTCAGC 34152548 Query 180146 TCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTC 180205 ||| || || || || ||||||| ||| | |||| || |||||||||| || || Sbjct 34152549 TCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTC 34152608 Query 180206 TGACGCAATGCCCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGA 180265 ||| | ||||| || || || ||||| || ||||||| |||| |||| ||||| || || Sbjct 34152609 TGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGA 34152668 Query 180266 GCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTC 180325 |||||||||||| |||||||| || |||||| | || ||||| ||||| ||||||||||| Sbjct 34152669 GCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTC 34152728 Query 180326 ACTGTTCTCCGCAATGCACGGTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGA 180385 || || || ||||| ||||| |||| |||||| || | | |||||||| || Sbjct 34152729 CCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGA 34152788 Query 180386 AACTGAGTCCCAGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGT 180445 || ||| || || | ||||||| ||| || ||||||||||| || || || ||||| Sbjct 34152789 AAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGT 34152848 Query 180446 TGCTGCACATGGATACTTCGGT-CGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCC 180504 || || ||||| || || ||| || | |||||||| ||||| ||||||||||| | Sbjct 34152849 AGCCGCTCATGGTTATTTTGGTCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTC 34152908 Query 180505 GTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGG 180564 |||| | ||||||||||| || || |||||||| || || |||||||| ||||| | | Sbjct 34152909 GTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAG 34152968 Query 180565 GCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATG 180624 | | ||||| ||||| |||||||| || |||||||| |||||||| || | ||||| Sbjct 34152969 GTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATA 34153028 Query 180625 GTCAAGGTCGTGTGCTCAACACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGG 180684 ||||||| ||||| | || |||||||| || | | ||||||||| || ||||||| Sbjct 34153029 GTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGG 34153088 Query 180685 AAGT 180688 | || Sbjct 34153089 AGGT 34153092 >seq8 Length=31745509 Score = 327 bits (362), Expect = 1e-84 Identities = 353/465 (76%), Gaps = 2/465 (0%) Strand=Plus/Plus Query 180075 TACATGGGTCGTGAGTGGGAACTTTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GT 180133 |||||||||||||||||||| ||| || || | |||||||| || ||||| ||| || Sbjct 5168713 TACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGAT-TGCTGT 5168771 Query 180134 AGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCA 180193 |||||||| ||||| || || || || ||||||| ||| | |||| || ||||||| Sbjct 5168772 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCA 5168831 Query 180194 AGGTTCATTCTCTGACGCAATGCCCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGT 180253 ||| || ||||| | ||||| || || || ||||| || ||||||| |||| |||| Sbjct 5168832 AGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 5168891 Query 180254 TTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGT 180313 ||||| || |||||||||||||| |||||||| || |||||| | || ||||| ||||| Sbjct 5168892 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGT 5168951 Query 180314 CTTCGGCGGTTCACTGTTCTCCGCAATGCACGGTTCACTGGTTACCTCTTCACTGGTTCG 180373 ||||||||||| || || || ||||| ||||| |||| |||||| || | | Sbjct 5168952 ATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAG 5169011 Query 180374 TGAAACCACTGAAACTGAGTCCCAGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGAC 180433 |||||||| |||| ||| || || | ||||||| ||| || ||||||||||| || Sbjct 5169012 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAAC 5169071 Query 180434 CTACAACATCGTTGCTGCACATGGATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTT 180493 || || ||||| || || ||||| || || || || | |||||||| ||||| || Sbjct 5169072 TTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTT 5169131 Query 180494 CAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGT 180538 ||||||||| ||||| | ||||||||||| || || |||||||| Sbjct 5169132 CAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGT 5169176 >seq4 Length=35924511 Score = 168 bits (186), Expect = 8e-37 Identities = 186/248 (75%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 180492 TTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGG 180551 ||||||||||| ||||| | ||||||||||| || || |||||||| | | |||||| Sbjct 4757228 TTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAATAAGTATCTGG 4757287 Query 180552 TTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAG 180611 || ||||| | || | ||||| ||| | |||||||| || | |||||| |||||||| Sbjct 4757288 TTTACTGCTTTAGGTATCAGCACTATGACTTTCAACCTAAATGATTTCAATTTCAACCAA 4757347 Query 180612 TCCATCATTGATGGTCAAGGTCGTGTGCTCAACACTTGGGCAGACGTACTCAACCGCGCT 180671 || | ||||| |||||| |||| | || ||||| || || | | ||||||||| Sbjct 4757348 TCTGTAGTTGATAGTCAAGCCTGTGTAATTAATACTTGAGCTGATATCATTAACCGCGCT 4757407 Query 180672 GGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTGGCA 180731 ||| |||| |||||||||| ||| | ||||||||| |||||| | || ||| | || Sbjct 4757408 AATCTTGGTAAAGAAGTTATGCTCGAACATAATGCTCATAACTTCTCTCTAGACTTAGCT 4757467 Query 180732 GCTGCTGA 180739 |||| ||| Sbjct 4757468 GCTGTTGA 4757475 >seq36 Length=917149 Score = 152 bits (168), Expect = 6e-32 Identities = 213/296 (72%), Gaps = 2/296 (1%) Strand=Plus/Minus Query 179739 TGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 179798 |||| | |||||| | | | ||||| ||| | ||||| || || | || ||||| Sbjct 330006 TGGGGTCGCTTCTGTAACTAGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTT 329947 Query 179799 GGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCAT 179857 || ||| ||||||| || ||| | ||| | |||||| |||| || || |||||||||| Sbjct 329946 GGTGTTTTGATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCAT 329888 Query 179858 CGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTA 179917 || ||| || || || || ||||| || |||||||| || | || || || | || Sbjct 329887 TGCCATTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCAGGATCTCTACTTTA 329828 Query 179918 TGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTT 179977 ||| ||||| || || || ||||| || |||| |||| || || ||| | ||||| Sbjct 329827 TGGCAACAATATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCACTT 329768 Query 179978 CTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTT 180033 ||||| ||||||||||| || || |||| || ||| | || ||||||||||||| Sbjct 329767 TTATCCAATCTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGTCCTT 329712 >seq4826 Length=244980 Score = 138 bits (152), Expect = 1e-27 Identities = 148/196 (76%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 182241 TTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAG 182300 ||||||| || || ||||| || || |||||||| || || || ||||| | || ||| Sbjct 499 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 440 Query 182301 AAGACCCAGAGTTCGAGACGTTCTACACAAAGAACATTCTCTTGAATGAAGGTCTGCGTG 182360 |||| || || || ||||| ||||||||||| || |||||||| || |||||| | |||| Sbjct 439 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 380 Query 182361 CATGGTTAGCACCAGTCGATCAACCACATGAGAACTTTGTGTTCCCTGAGGAAGTATTAC 182420 | ||| | || | ||||| || ||||| ||| || | ||||||||||| || ||| Sbjct 379 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTAC 320 Query 182421 CCAGAGGTAACGCACT 182436 || | || ||||| || Sbjct 319 CCCGTGGAAACGCTCT 304 Score = 82.4 bits (90), Expect = 9e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | |||||||||||||| ||| Sbjct 209096 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 209155 Query 141314 CCTACCTGGGGAG 141326 ||| | ||||||| Sbjct 209156 CCTGCTTGGGGAG 209168 >seq1731 Length=31681 Score = 132 bits (146), Expect = 6e-26 Identities = 147/196 (75%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 182241 TTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAG 182300 ||||||| || || ||||| || || |||||||| || || || ||||| | || ||| Sbjct 4297 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 4238 Query 182301 AAGACCCAGAGTTCGAGACGTTCTACACAAAGAACATTCTCTTGAATGAAGGTCTGCGTG 182360 |||| || || || ||||| ||||||||||| || |||||||| || |||||| | |||| Sbjct 4237 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 4178 Query 182361 CATGGTTAGCACCAGTCGATCAACCACATGAGAACTTTGTGTTCCCTGAGGAAGTATTAC 182420 | ||| | || | ||||| || ||||| | | || | ||||||||||| || ||| Sbjct 4177 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAACCCTTATATTCCCTGAGGAGGTTCTAC 4118 Query 182421 CCAGAGGTAACGCACT 182436 || | || ||||| || Sbjct 4117 CCCGTGGAAACGCTCT 4102 >seq3 Length=50312079 Score = 114 bits (126), Expect = 2e-20 Identities = 145/197 (74%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 182241 TTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAG 182300 ||||||| || || |||| || || |||||||| || || || |||| | || ||| Sbjct 34945760 TTGGTCTAGCCCTGAACCCGCGCGCCTATGACTTCGTTTCTCAGAAAATTCGCGCGGCAG 34945819 Query 182301 AAGACCCAGAGTTCGAGACGTTCTACACAAAGAACATTCTCTTGAATGAAGGTCTGCGTG 182360 |||| || || || ||||| ||||||||||| || |||||||| || |||||| | |||| Sbjct 34945820 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 34945879 Query 182361 CATGGTTAGCACCAGTCGATCAACCACATGAGAACTTTGTGTTCCCTGAGGAAGTAT-TA 182419 | ||| | || | ||||| | ||||| | || | |||||||||| ||||| || Sbjct 34945880 CTTGGATGGCGGCTCAAGATCAGACTCATGAAAGACTTATATTCCCTGAGG-AGTATCTA 34945938 Query 182420 CCCAGAGGTAACGCACT 182436 ||| | || ||||| || Sbjct 34945939 CCCCGTGGAAACGCTCT 34945955 >seq5 Length=41956025 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 141253 ATTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAA 141312 ||||||||||||||||| || ||||| | || ||||||| | |||||||||||||| || Sbjct 36491951 ATTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAA 36492010 Query 141313 TCCTACCTGGGGAG 141326 |||||||||||||| Sbjct 36492011 TCCTACCTGGGGAG 36492024 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 141253 ATTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAA 141312 ||||||||||||||||| || ||||| | || ||||||| | |||||||||||||| || Sbjct 34258805 ATTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAA 34258864 Query 141313 TCCTACCTGGGGAG 141326 |||| ||||||||| Sbjct 34258865 TCCTGCCTGGGGAG 34258878 >seq2 Length=43913520 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 141253 ATTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAA 141312 ||||||||||||||||| || ||||| | || ||||||| | |||||||||||||| || Sbjct 5552183 ATTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAA 5552124 Query 141313 TCCTACCTGGGGAG 141326 |||||||||||||| Sbjct 5552123 TCCTACCTGGGGAG 5552110 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/189 (71%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 171907 TTCTGGACGCTGCAGATGAAGCGGGGGTTGATGCTCCATATTCCTGCCGTGCCGGTGCCT 171966 |||| || ||||| || || || ||| |||| ||||||||||||| | || ||||| | Sbjct 22638276 TTCTAGATGCTGCTGAGGAGGCAGGGATTGAGCTTCCATATTCCTGCAGAGCAGGTGCAT 22638335 Query 171967 GTTCCAGCTGTGCTGGTAAACTTGAGAGTGGTACGGTAGATCAGTCAGAGCAATCTTTCC 172026 |||||| |||||| |||||| | | | || | || || |||||||| ||| || | Sbjct 22638336 GTTCCACCTGTGCCGGTAAAGTGGTGTCGGGAGCTGTTGACCAGTCAGATGGATCCTTTC 22638395 Query 172027 TTGATGATGATCAAATGGACGCAGG--ATTCGTTCTGACCTGTGTTGCTTATCCTACAAG 172084 | || || | |||||| | | ||| ||| || |||||||||| | || || || | Sbjct 22638396 TCGACGAGAACCAAATGAAAGAAGGTTATTTGT--TGACCTGTGTCTCGTACCCCACTTG 22638453 Query 172085 CGATTGTGT 172093 |||| ||| Sbjct 22638454 TGATTCTGT 22638462 >seq1 Length=51465339 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 141253 ATTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAA 141312 ||||||||||||||||| || ||||| | || ||||||| | || ||||||||||| || Sbjct 16908012 ATTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACAGACTAGTCGTAGGTTCGAA 16908071 Query 141313 TCCTACCTGGGGAG 141326 |||||||| ||||| Sbjct 16908072 TCCTACCTAGGGAG 16908085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610359977813040