Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq4825 518 4e-142 seq6 345 5e-90 seq8 279 6e-70 seq36 131 2e-25 seq4 113 5e-20 seq4826 111 2e-19 seq1731 105 8e-18 seq3 86.0 7e-12 >seq4825 Length=155848 Score = 518 bits (574), Expect = 4e-142 Identities = 692/956 (72%), Gaps = 8/956 (1%) Strand=Plus/Minus Query 169442 TTGGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGT-TTCATC 169500 |||| |||||||||||| | ||||| || ||| | || ||| | | ||| || || Sbjct 1237 TTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTC-TGTATTTATT 1179 Query 169501 GTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGT 169560 | || |||||||| || ||||| || ||||| || || || | ||||| || | || Sbjct 1178 ATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGA 1119 Query 169561 TCTTTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATC 169620 ||| | | ||||| ||||| || || || ||||| || |||| | || ||||| Sbjct 1118 TCTCTACTTTATGGCAACAATATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATA 1059 Query 169621 GGACTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGT 169680 || | ||||| || |||||||||||||| || |||||||||||||||| || || ||| Sbjct 1058 GGTTTGCACTTTTATCCAATCTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGT 999 Query 169681 GGTCCTTATCAGTTGGTAATC-TTC--CACTTCCTTATTGGTATCTCAGCATACATGGGA 169737 ||||||||| | || |||| ||| ||||| | ||||| | | |||||||| Sbjct 998 GGTCCTTATGAATT---AATCGTTCTACACTTTTTACTTGGTGTAGCTTGTTACATGGGT 942 Query 169738 AGACAGTGGGAACTATCATACAGATTAGGAATGCGTCCTTGGATCTGTGTTGCATACTCT 169797 | ||||||| || | | | |||| ||||| |||||||| ||||||||| || Sbjct 941 CGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCA 882 Query 169798 GCACCAGTATCTGCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATTC 169857 || || || | ||||| ||||| ||||| | |||||| | ||||| || || Sbjct 881 GCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTT 822 Query 169858 TCTGATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCA 169917 |||||||||||||| ||||| ||||| |||||||||||||| ||| | || ||||| || Sbjct 821 TCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCT 762 Query 169918 GAGCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGA 169977 ||||| ||||| || ||||| || || |||||| ||| ||||| || | ||||| || Sbjct 761 GAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGT 702 Query 169978 TCTTTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACA 170037 || |||| || ||||||||||| | || || || | | ||||| ||||| ||| Sbjct 701 TCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACA 642 Query 170038 GAGCAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATA 170097 || | || || || | ||||| | |||||| |||||||||||||| || || || Sbjct 641 GAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATC 582 Query 170098 GTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCA 170157 ||||| || || ||||| ||||| || | |||||||| |||||| ||||||||||| Sbjct 581 GTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCT 522 Query 170158 AGAAGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATG 170217 | | |||||||||||||||| | || ||||| ||| || | ||||| || || | Sbjct 521 CGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTA 462 Query 170218 GGTATCTGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGAT 170277 |||||| |||| ||||| |||||| | ||||||||||| || |||||||| || |||||| Sbjct 461 GGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGAT 402 Query 170278 GCTAACGGAAAAATCGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATG 170337 | | || | | || |||| |||| | | ||| | || ||| | |||||| Sbjct 401 AGTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATG 342 Query 170338 GAAGTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCATCTGCTGA 170393 ||||||||||| ||| | ||||| || |||||||| |||||| |||| ||| ||| Sbjct 341 GAAGTTATGCACGAACGTAATGCTCATAACTTCCCTCTAGACTTAGCTGCTGTTGA 286 Score = 381 bits (422), Expect = 7e-101 Identities = 706/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Plus Query 170529 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTTGTATTCATAGGATGGTCTGGT 170588 |||||| || | || ||||||||| ||| || ||||| || || |||||||||| ||| Sbjct 33139 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGT 33198 Query 170589 CTTTTACTTCTGCCTTGTGCATACCTATCAATCGGTGGTTGGTTCTTAGGGACTACCTTC 170648 || || || | |||||||| || | | | || || |||||| ||| || ||||| Sbjct 33199 CTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGAGGCTGGTTCACAGGTACAACCTTT 33258 Query 170649 GTTACATCATGGTATACACATGGTGTTGCTTCCTCATATCTTGAGGGATGTAACTTCCTA 170708 || || ||||||||||| ||||| | || || ||| | || || || || ||| || Sbjct 33259 GTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAATTTCTTA 33318 Query 170709 ACAGCAGCAGTTTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGA 170768 || || |||||||| || |||| | | | ||| | | |||| || ||||| Sbjct 33319 ACTGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTGTGGGGT 33378 Query 170769 CCTGAAGCACAAGGTTCATTTGTTCGTTGGTTACAACTCGGAGGTTTATGGAACTTTGTA 170828 |||||||||||||| ||| |||||||| ||| | || ||| | |||| ||||| Sbjct 33379 CCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTT 33438 Query 170829 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCAGACAATTTGAGATCGCAGGA 170888 || | ||||| | || ||||| ||||| |||||| | | ||||| || | || || Sbjct 33439 GCCCTCCATGGTGCTTTCGGACTAATAGGCTTCATGTTACGTCAATTCGAACTTGCTCGA 33498 Query 170889 CTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACT 170948 ||| | ||||||| || ||| |||| || |||| | || || || || | Sbjct 33499 TCTGTTCAATTGCGACCTTATAATGCAATCGCGTTTTCTGGTCCAATTGCTGTTTTTGTT 33558 Query 170949 AGCATCTTTCTGATCTATCCACTAGGTCAGCACAGTTGGTTCTTCGCACCATCATTCGGT 171008 | || ||||| ||||||||||| || |||||||||| || ||| || ||| Sbjct 33559 TCTGTATTCCTGATTTATCCACTAGGACAATCTGGTTGGTTCTTTGCGCCAAGTTTTGGT 33618 Query 171009 GTCGCAGCAATTTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAAT 171068 || ||||| || ||||| | ||| | || | ||||| || || || ||||| || Sbjct 33619 GTAGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACATTAAAC 33678 Query 171069 CCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTATTATGTGCCATTCAT 171128 |||||||| |||||||| |||||||| || | || | || || |||| || |||||| Sbjct 33679 CCATTTCATATGATGGGAGTTGCAGGGGTATTGGGCGCTGCTTTGCTATGCGCTATTCAT 33738 Query 171129 GGTGCAACAGTGCAGAACACATTGTATGAAGACACATCAGTTTATACTGATAATAAAATT 171188 ||||| || || | || || || | ||||| || |||| | Sbjct 33739 GGTGCTACTGTAGAAAATACTTTATTTGAAG------------ATGGTGAT-----GGTG 33781 Query 171189 CAAAGCACAACATTCCGTGCCTTTGATCCTACACAGGAAGAAGAAACTTACAGTATGATT 171248 |||| ||||||||||| ||| | || || || | ||||||||||| ||| | Sbjct 33782 CAAA----TACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTC 33837 Query 171249 ACAGCAAACAGATTCTGGTCACAGATATTTGGTATTGCTTTCTCTAACAAAAGATTTTTA 171308 || || ||| | || ||||| || || ||||| ||||||| || || ||| | | ||| Sbjct 33838 ACCGCGAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 33897 Query 171309 CACTTCCTTATGTTGTTCGTTCCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTA 171368 || ||| ||||||| || || || || | ||| | |||| || | || | || Sbjct 33898 CATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTT 33957 Query 171369 GGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATCTCAAGAGATAAGAGCAGCAGAA 171428 ||||| || || ||||| | || || || || || ||||| || || | || |||||| Sbjct 33958 GGTCTGGCCCTGAACCTGCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAGAA 34017 Query 171429 GACCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCA 171488 || || || || |||||||||||||| || ||||| || | || |||||||| | || Sbjct 34018 GATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTGCT 34077 Query 171489 TGGATGTCATCAGTTGACCAACCACATGAGAACTTCGTATTCCCAGAAGAAGTGTTACCA 171548 |||||| | | || || || ||||| ||| | ||||||| || || || |||| Sbjct 34078 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCC 34137 Query 171549 AGAGGTAACGCACTTTAA 171566 | || ||||| |||||| Sbjct 34138 CGTGGAAACGCTCTTTAA 34155 >seq6 Length=36610139 Score = 345 bits (382), Expect = 5e-90 Identities = 387/516 (75%), Gaps = 1/516 (0%) Strand=Plus/Plus Query 169763 TAGGAATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCATTCGCTG 169822 |||| ||||| |||||||| ||||||||| || || || || | ||||| |||| Sbjct 34152512 TAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTG 34152571 Query 169823 TATTCTTAGTATACCCATTTGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCT 169882 | ||||| | |||||| | ||||| || || |||||||||||||| ||||| |||| Sbjct 34152572 TTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCT 34152631 Query 169883 CAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAGCATAACATTCTAATGCATCCTT 169942 | |||||||||||||| ||| | || ||||| || ||||| ||||| || ||||| || | Sbjct 34152632 CTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCAT 34152691 Query 169943 TCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGATCTTTATTCTCAGCAATGCATGGTT 170002 | |||||| ||| ||||| || | ||||| || || |||| || |||||||||| Sbjct 34152692 TTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTT 34152751 Query 170003 CACTTGTTACTTCATCTCTAATCAGAGAAACAACAGAGCAAGAGTCACAGAACTATGGTT 170062 | | || || || | | ||||| ||||| ||||| | || || || | |||| Sbjct 34152752 CTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTT 34152811 Query 170063 ATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGT- 170121 | | |||||| |||||||||||||| || || || ||||| || || ||||| |||||| Sbjct 34152812 ACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGTC 34152871 Query 170122 CGTCTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGTCTACACTTCTTCCTAGCA 170181 || | |||||||| |||||| ||||||||||| | | |||||||||||||||| Sbjct 34152872 CGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCT 34152931 Query 170182 GTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTCAAC 170241 | || ||||| ||| || | ||||| || || | |||||| |||| ||||| |||||| Sbjct 34152932 GCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGGCTTTCAAC 34152991 Query 170242 TTGAATGGTTTCAACTTTAACCAATCAGTTGTTGAT 170277 | ||||||||||| || |||||||| || |||||| Sbjct 34152992 CTAAATGGTTTCAATTTCAACCAATCTGTAGTTGAT 34153027 >seq8 Length=31745509 Score = 279 bits (308), Expect = 6e-70 Identities = 340/464 (73%), Gaps = 0/464 (0%) Strand=Plus/Plus Query 169729 TACATGGGAAGACAGTGGGAACTATCATACAGATTAGGAATGCGTCCTTGGATCTGTGTT 169788 |||||||| | ||||||| || | | | |||| ||||| |||||||| |||| Sbjct 5168713 TACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTT 5168772 Query 169789 GCATACTCTGCACCAGTATCTGCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAG 169848 ||||| || || || || | ||||| ||||| ||||| | |||||| | ||||| Sbjct 5168773 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAA 5168832 Query 169849 GGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTT 169908 || || |||||||||||||| ||||| ||||| |||||||||||||| ||| | || Sbjct 5168833 GGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTA 5168892 Query 169909 TTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATG 169968 ||||| || ||||| ||||| || ||||| || || |||||| ||| ||||| || | Sbjct 5168893 TTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTA 5168952 Query 169969 TTCGGAGGATCTTTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGA 170028 ||||| || || |||| || ||||||||||| | || || || | | ||||| Sbjct 5168953 TTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGG 5169012 Query 170029 GAAACAACAGAGCAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACA 170088 ||||| ||||| | || || || | ||||| | |||||| |||||||||||||| Sbjct 5169013 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACT 5169072 Query 170089 TACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTC 170148 || || || ||||| || || ||||| ||||| || | |||||||| |||||| ||| Sbjct 5169073 TATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTC 5169132 Query 170149 AACAACTCAAGAAGTCTACACTTCTTCCTAGCAGTTTTCCCTGT 170192 |||||||| | | |||||||||||||||| | || ||||| Sbjct 5169133 AACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGT 5169176 >seq36 Length=917149 Score = 131 bits (144), Expect = 2e-25 Identities = 180/249 (72%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 169442 TTGGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGT-TTCATC 169500 |||| |||||||||||| | ||||| || ||| | || ||| | | ||| || || Sbjct 329957 TTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTC-TGTATTTATT 329899 Query 169501 GTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGT 169560 | || |||||||| ||||| || ||||| || || || | ||||| || | || Sbjct 329898 ATCGCCTTCATTGCCATTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCAGGA 329839 Query 169561 TCTTTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATC 169620 ||| | | ||||| ||||| || || || ||||| || |||| | || ||||| Sbjct 329838 TCTCTACTTTATGGCAACAATATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATA 329779 Query 169621 GGACTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGT 169680 || | ||||| || |||||||||||||| || |||||||||||||||| || || ||| Sbjct 329778 GGTTTGCACTTTTATCCAATCTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGT 329719 Query 169681 GGTCCTTAT 169689 ||||||||| Sbjct 329718 GGTCCTTAT 329710 >seq4 Length=35924511 Score = 113 bits (124), Expect = 5e-20 Identities = 179/257 (70%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 170137 TATGCTTCATTCAACAACTCAAGAAGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTA 170196 |||||| ||||||||||| | | |||||||||||||||| | || ||||| || Sbjct 4757219 TATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAATA 4757278 Query 170197 TGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTCAACTTGAATGGTTTCAAC 170256 || | ||||| || || | |||||| |||| ||| | |||||| | |||| |||||| Sbjct 4757279 AGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGACTTTCAACCTAAATGATTTCAAT 4757338 Query 170257 TTTAACCAATCAGTTGTTGATGCTAACGGAAAAATCGTCCCAACATGGGGTGATGTTCTA 170316 || |||||||| || |||||| | | | | | || || | |||| | | Sbjct 4757339 TTCAACCAATCTGTAGTTGATAGTCAAGCCTGTGTAATTAATACTTGAGCTGATATCATT 4757398 Query 170317 AACAGAGCAAACTTGGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCACTA 170376 ||| | || || | |||| |||||||||| ||| ||||| || |||||| | ||| Sbjct 4757399 AACCGCGCTAATCTTGGTAAAGAAGTTATGCTCGAACATAATGCTCATAACTTCTCTCTA 4757458 Query 170377 GACCTAGCATCTGCTGA 170393 ||| |||| ||| ||| Sbjct 4757459 GACTTAGCTGCTGTTGA 4757475 >seq4826 Length=244980 Score = 111 bits (122), Expect = 2e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 171366 GTAGGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATCTCAAGAGATAAGAGCAGCA 171425 || ||||| || || |||||| | || || || || || ||||| || || | || ||| Sbjct 500 GTTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCA 441 Query 171426 GAAGACCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGA 171485 ||||| || || || |||||||||||||| || ||||| || | || |||||||| | Sbjct 440 GAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGT 381 Query 171486 GCATGGATGTCATCAGTTGACCAACCACATGAGAACTTCGTATTCCCAGAAGAAGTGTTA 171545 || |||||| | | || || || ||||| ||| | ||||||| || || || || Sbjct 380 GCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTA 321 Query 171546 CCAAGAGGTAACGCACTTTAA 171566 || | || ||||| |||||| Sbjct 320 CCCCGTGGAAACGCTCTTTAA 300 >seq1731 Length=31681 Score = 105 bits (116), Expect = 8e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 171366 GTAGGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATCTCAAGAGATAAGAGCAGCA 171425 || ||||| || || |||||| | || || || || || ||||| || || | || ||| Sbjct 4298 GTTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCA 4239 Query 171426 GAAGACCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGA 171485 ||||| || || || |||||||||||||| || ||||| || | || |||||||| | Sbjct 4238 GAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGT 4179 Query 171486 GCATGGATGTCATCAGTTGACCAACCACATGAGAACTTCGTATTCCCAGAAGAAGTGTTA 171545 || |||||| | | || || || ||||| | | | ||||||| || || || || Sbjct 4178 GCTTGGATGGCGGCTCAAGATCAGCCTCATGAAACCCTTATATTCCCTGAGGAGGTTCTA 4119 Query 171546 CCAAGAGGTAACGCACTTTAA 171566 || | || ||||| |||||| Sbjct 4118 CCCCGTGGAAACGCTCTTTAA 4098 >seq3 Length=50312079 Score = 86.0 bits (94), Expect = 7e-12 Identities = 144/203 (71%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 171366 GTAGGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATCTCAAGAGATAAGAGCAGCA 171425 || |||||||| || |||| | || || || || || ||||| | || | || ||| Sbjct 34945759 GTTGGTCTAGCCCTGAACCCGCGCGCCTATGACTTCGTTTCTCAGAAAATTCGCGCGGCA 34945818 Query 171426 GAAGACCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGA 171485 ||||| || || || |||||||||||||| || ||||| || | || |||||||| | Sbjct 34945819 GAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGT 34945878 Query 171486 GCATGGATGTCATCAGTTGACCAACCACATGAGA-ACTTCGTATTCCCAGAAGAAGTGT- 171543 || |||||| | | || || | ||||| | |||| ||||||| | || ||| | Sbjct 34945879 GCTTGGATGGCGGCTCAAGATCAGACTCATGAAAGACTT-ATATTCCCTG-AGGAGTATC 34945936 Query 171544 TACCAAGAGGTAACGCACTTTAA 171566 |||| | || ||||| |||||| Sbjct 34945937 TACCCCGTGGAAACGCTCTTTAA 34945959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579177858987840