Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_015281.1 Length=179563 Score E Sequences producing significant alignments: (Bits) Value seq4825 616 2e-171 seq6 407 2e-108 seq8 336 3e-87 seq4 145 9e-30 seq36 141 1e-28 seq4826 132 6e-26 seq1731 129 7e-25 seq1 116 4e-21 seq3 107 2e-18 >seq4825 Length=155848 Score = 616 bits (682), Expect = 2e-171 Identities = 736/994 (74%), Gaps = 4/994 (0%) Strand=Plus/Minus Query 167863 TTCTGCGAGTGGGTAAC-ATCAACTAACAACCGCCTCTATGTCGGTTGGTTCGGCGTACT 167921 ||||| | ||| |||| | || | || ||||| || || | || ||||| || || | Sbjct 1277 TTCTGTAACTGGATAACCAGCACCGAA-AACCGTCTTTACATTGGATGGTTTGGTGTTTT 1219 Query 167922 GATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 167980 |||||| || ||| | ||| | |||||| ||||| || || |||||||| | ||||||| Sbjct 1218 GATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTC 1160 Query 167981 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACA 168040 | || || || || || || || |||||||| || |||| || || | ||||| |||| Sbjct 1159 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACA 1100 Query 168041 ACATCATCTCTGGTGCAGTTGTCCCTTCTTCTAATGCTATTGGACTTCACTTCTATCCCA 168100 | || || || ||||| || | || ||||| ||||| || | ||||| ||||| | Sbjct 1099 ATATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAA 1040 Query 168101 TCTGGGAAGCAGCATCACTCGATGAGTGGTTGTATAACGGTGGTCCTTTCCAACTAGTAG 168160 |||||||||| || || | ||||| ||||| || ||||||||||||| || || | | Sbjct 1039 TCTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGTCCTTATGAATTAATCG 980 Query 168161 TCTTTCACTTCCTCATCGGTATCTATGCATACATGGGACGTGAATGGGAACTTTCATATC 168220 | | ||||| | | ||| | | |||||||| ||||| ||||| ||| | | Sbjct 979 TTCTACACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCC 920 Query 168221 GTTTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCAGCGAGTG 168280 || |||||||||| || ||||| ||||||||| || || || || || || || | || Sbjct 919 GTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 860 Query 168281 CAGTATTCCTAGTGTATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAA 168340 | || ||| | | || || |||||||||| || || ||||||| ||||| || |||| Sbjct 859 CTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAA 800 Query 168341 TCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATC 168400 |||| || || ||||||| |||| | || ||||| ||||||||||| || || ||||| | Sbjct 799 TCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 740 Query 168401 CCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACG 168460 | || || ||| | ||||| ||||| ||||| || || | |||||||||||||| | Sbjct 739 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCATG 680 Query 168461 GAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACG 168520 | |||||| || ||| | | | || || || || |||| ||||| || | | Sbjct 679 GTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 620 Query 168521 GTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCG 168580 |||||| |||||| |||||||||||||| || || |||||||||||||||||||| || | Sbjct 619 GTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 560 Query 168581 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTG 168640 | || || ||||||||||| ||| ||||||||||| || || || ||||||||||| | Sbjct 559 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAG 500 Query 168641 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCA 168700 |||| |||||||| || || |||||||| || || | || || ||| ||||| |||| Sbjct 499 CTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGGCTTTCA 440 Query 168701 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 168760 |||| || |||||||| |||||||| || | ||||| |||| || ||||| | || | Sbjct 439 ACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATA 380 Query 168761 CCTGGGCAGATGTTCTGAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACG 168820 | ||||| ||| | | ||||||||| || ||||||||||||||||| || ||||| | Sbjct 379 CTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCACGAACGTAATG 320 Query 168821 CACACAACTTCCCACTCGATCTTGCTGCTGCTGA 168854 | || |||||||| || || | ||||||| ||| Sbjct 319 CTCATAACTTCCCTCTAGACTTAGCTGCTGTTGA 286 Score = 549 bits (608), Expect = 2e-151 Identities = 732/1016 (72%), Gaps = 6/1016 (1%) Strand=Plus/Plus Query 169307 TTCGATGTTCTCGATGACTGGCTCAAACGCGACCGCTTTGTATTCATTGGTTGGTCTGGT 169366 || ||| || | ||||||||| | | ||||| || || || | || ||||| ||| Sbjct 33139 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGT 33198 Query 169367 CTACTTCTTCTTCCCACTGCCTATCTTGCTATTGGAGGGTGGCTCACTGGTACAGCGTTT 169426 ||| | || |||| ||||||| | ||| | ||||| ||| |||| |||||| | ||| Sbjct 33199 CTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGAGGCTGGTTCACAGGTACAACCTTT 33258 Query 169427 GTTACTTCCTGGTACACCCACGGACTCGCTTCCAGTTACT---TAGAAGGCGCTAACTTC 169483 || ||||| ||||| ||||| ||| | || ||||| || | |||||| || ||| Sbjct 33259 GTAACTTCATGGTATACCCATGGATTGGC---CAGTTCCTATTTGGAAGGCTGCAATTTC 33315 Query 169484 CTCACTGCTGCTGTCAGTACACCTGCTGACGCTATGGGACACTCACTGCTCTTGCTATGG 169543 | ||||| || || ||| |||||| | | | | ||| || || | || || ||| Sbjct 33316 TTAACTGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTGTGG 33375 Query 169544 GGTCCAGAAGCACAAGGCGATTTCGTTCGCTGGTGTCAATTGGGTGGTCTCTGGAACTTT 169603 ||||| ||||||||||| ||||| ||| ||||||||||| |||||||| |||| ||| Sbjct 33376 GGTCCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTT 33435 Query 169604 GTAGCACTTCATGGTGCATTTGCATTGATTGGTTTCATGCTTAGGCAGTTTGAATTGGCA 169663 || || || |||||||| || | | | || || |||||| | | || || ||| | || Sbjct 33436 GTTGCCCTCCATGGTGCTTTCGGACTAATAGGCTTCATGTTACGTCAATTCGAACTTGCT 33495 Query 169664 CGTCTTATTGGCATCCGTCCTTATAATGCTATTGCATTCTCTGGTCCTATTGCTGTATTT 169723 || | || | || ||||||||||| || || || |||||||| |||||||| ||| Sbjct 33496 CGATCTGTTCAATTGCGACCTTATAATGCAATCGCGTTTTCTGGTCCAATTGCTGTTTTT 33555 Query 169724 GTCAGTGTCTTTCTTATCTACCCACTTGGACAGTCCTCATGGTTCTTTGCTCCCTCCTTT 169783 || ||| || || || || ||||| ||||| || ||||||||||| || ||| Sbjct 33556 GTTTCTGTATTCCTGATTTATCCACTAGGACAATCTGGTTGGTTCTTTGCGCCAAGTTTT 33615 Query 169784 GGAGTATCAGCAATCTTCAGGTTCCTGTTGTTCCTGCAAGGATTCCACAACTGGACGTTG 169843 || ||| |||| || || | ||| | | || | |||||||| || || ||||| || Sbjct 33616 GGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACATTA 33675 Query 169844 AATCCATTCCACATGATGGGTGTAGCAGGAATCTTGGGCGGAGCATTGCTTTCTGCTATC 169903 || ||||| || |||||||| || ||||| | ||||||| || ||||| | ||||| Sbjct 33676 AACCCATTTCATATGATGGGAGTTGCAGGGGTATTGGGCGCTGCTTTGCTATGCGCTATT 33735 Query 169904 CATGGTGTTACAGTAGAGAACACATTGTATGAAGACGGTGAGCAGGCAAATACTTTCAAG 169963 ||||||| ||| ||||| || || || | |||||| ||||| |||||||| ||| Sbjct 33736 CATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGT 33795 Query 169964 GCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGG 170023 || ||| | | || || | ||||| |||||||| |||||||| || |||||||| ||| Sbjct 33796 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCGAACCGCTTTTGG 33855 Query 170024 TCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGTTGGCTTCATTTTTTCATGTTGTTT 170083 || || ||||| || |||| ||||| || || |||||| | ||||| || ||||| ||| Sbjct 33856 TCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 33915 Query 170084 GTGCCTGTTATGGGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTT 170143 || || || | ||| | |||| || |||| | |||| || || || || || Sbjct 33916 GTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTG 33975 Query 170144 CGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACC 170203 || || || || ||||| |||||| || | || ||||||||||| ||||||||||| Sbjct 33976 CGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAGAAGATCCTGAATTTGAGACT 34035 Query 170204 TTCTACACCAAAAACATCCTATTGAATGAAGGACTTCGTGCATGGTTGGCACCTGCTGAT 170263 |||||||| ||||| || || || || ||||| ||||||| ||| |||| || ||| Sbjct 34036 TTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGAT 34095 Query 170264 CAACCACATGAAAACTTCATCTTCCCAGAAGAAGTTCTTCCGAGAGGTAACGCACT 170319 || || ||||||||| | || ||||| || || ||||| || | || ||||| || Sbjct 34096 CAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 34151 >seq6 Length=36610139 Score = 407 bits (450), Expect = 2e-108 Identities = 442/585 (76%), Gaps = 1/585 (0%) Strand=Plus/Plus Query 168220 CGTTTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCAGCGAGT 168279 ||| |||||||||| || ||||| ||||||||| || || || || || || || | | Sbjct 34152508 CGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACT 34152567 Query 168280 GCAGTATTCCTAGTGTATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGA 168339 || || ||| | | || || |||||||||| || || ||||||| ||||| || ||| Sbjct 34152568 GCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGA 34152627 Query 168340 ATCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCAT 168399 ||||| || || ||||||| |||| | || ||||| ||||||||||| || || ||||| Sbjct 34152628 ATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCAC 34152687 Query 168400 CCCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCAC 168459 || || || ||| | ||||| ||||| ||||| || || | |||||||||||||| Sbjct 34152688 CCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCAT 34152747 Query 168460 GGAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTAC 168519 || |||||| || ||| | | | || || || || |||| ||||| || | Sbjct 34152748 GGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 34152807 Query 168520 GGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTC 168579 ||||||| |||||| |||||||||||||| || || |||||||||||||||||||| || Sbjct 34152808 GGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTT 34152867 Query 168580 GGT-CGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCT 168638 ||| || || ||||||||||| ||| ||||||||||| || || || ||||||||||| Sbjct 34152868 GGTCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCT 34152927 Query 168639 TGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATT 168698 ||||| |||||||| || || |||||||| || || | || || ||| ||||| || Sbjct 34152928 AGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGGCTTT 34152987 Query 168699 CAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAA 168758 |||||| || |||||||| |||||||| || | ||||| |||| || ||||| | || Sbjct 34152988 CAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAA 34153047 Query 168759 CACCTGGGCAGATGTTCTGAACCGCGCTGGTCTGGGTATGGAAGT 168803 || ||||| ||| | | ||||||||| || |||||||| || Sbjct 34153048 TACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAGGT 34153092 >seq8 Length=31745509 Score = 336 bits (372), Expect = 3e-87 Identities = 353/464 (76%), Gaps = 0/464 (0%) Strand=Plus/Plus Query 168190 TACATGGGACGTGAATGGGAACTTTCATATCGTTTAGGTATGCGTCCATGGATCTGTGTT 168249 |||||||| ||||| ||||| ||| | ||| |||||||||| || ||||| |||| Sbjct 5168713 TACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTT 5168772 Query 168250 GCATACTCTGCACCAGTCGCTGCAGCGAGTGCAGTATTCCTAGTGTATCCTTTCGGTCAA 168309 ||||| || || || || || || || | ||| || ||| | | || || |||||||| Sbjct 5168773 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAA 5168832 Query 168310 GGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATGTTGGTC 168369 || || || ||||||| ||||| || |||||||| || || ||||||| |||| | || Sbjct 5168833 GGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTA 5168892 Query 168370 TTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGGGGTA 168429 ||||| ||||||||||| || || ||||| || || || ||| | ||||| ||||| ||| Sbjct 5168893 TTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTA 5168952 Query 168430 TTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTTAGA 168489 || || || | |||||||||||||| || |||||| || ||| | | | || Sbjct 5168953 TTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGG 5169012 Query 168490 GAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAAACA 168549 || || || |||| ||||| || | ||||||| |||||| |||||||||||||| Sbjct 5169013 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACT 5169072 Query 168550 TACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTC 168609 || || |||||||||||||||||||| || || || || ||||||||||| ||| ||| Sbjct 5169073 TATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTC 5169132 Query 168610 AACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGT 168653 |||||||| || || || ||||||||||| ||||| |||||||| Sbjct 5169133 AACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGT 5169176 >seq4 Length=35924511 Score = 145 bits (160), Expect = 9e-30 Identities = 181/248 (73%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 168607 TTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGG 168666 ||||||||||| || || || ||||||||||| ||||| |||||||| | | |||||| Sbjct 4757228 TTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAATAAGTATCTGG 4757287 Query 168667 TTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 168726 || || || | || || ||| ||| | |||||||| || | |||||| |||||||| Sbjct 4757288 TTTACTGCTTTAGGTATCAGCACTATGACTTTCAACCTAAATGATTTCAATTTCAACCAA 4757347 Query 168727 TCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTTCTGAACCGCGCT 168786 || | ||||| |||| | |||| | || || || || ||| | | ||||||||| Sbjct 4757348 TCTGTAGTTGATAGTCAAGCCTGTGTAATTAATACTTGAGCTGATATCATTAACCGCGCT 4757407 Query 168787 GGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGATCTTGCT 168846 ||| |||| |||||||||| || | ||| || || |||||| | || || | ||| Sbjct 4757408 AATCTTGGTAAAGAAGTTATGCTCGAACATAATGCTCATAACTTCTCTCTAGACTTAGCT 4757467 Query 168847 GCTGCTGA 168854 |||| ||| Sbjct 4757468 GCTGTTGA 4757475 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/79 (85%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 168520 GGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTT-ACTT 168578 |||||||||||||| |||||||||||||| || || ||||||||| |||||||| | || Sbjct 4755093 GGTTACAAGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCATTCATGGTTAATTT 4755152 Query 168579 CGGTCGTTTGATCTTCCAA 168597 || || || ||||||||| Sbjct 4755153 TGGCCGATTAATCTTCCAA 4755171 Score = 86.0 bits (94), Expect = 7e-12 Identities = 142/202 (70%), Gaps = 5/202 (2%) Strand=Plus/Minus Query 169576 GTGTCAATTGGGTGGTCTCTGGAACTTTGTAGCACTTCATGGTGCATTTGCATTGATTGG 169635 ||||||||| |||||| | |||| ||||| || ||||||||||| || | | | || | Sbjct 12713499 GTGTCAATTAGGTGGTGTGTGGACTTTTGTTGCCCTTCATGGTGCTTTCGGACTAATAGC 12713440 Query 169636 TTTCATGCTTAGGCAGTTTGAATTGGCACGTCTTATTGG--CA--TCCGTCCTTATAATG 169691 || |||| | | || || ||| | | | || || || | || |||||||||| Sbjct 12713439 TT-CATGTTATGTCAATTCGAACTTAATTGCTTGATCGGTTCAATTGCGACCTTATAATG 12713381 Query 169692 CTATTGCATTCTCTGGTCCTATTGCTGTATTTGTCAGTGTCTTTCTTATCTACCCACTTG 169751 | || || || |||||||| |||| ||| ||||| ||| || || || || ||||| Sbjct 12713380 CAATCGCGTTTTCTGGTCCGATTGTTGTTTTTGTTTATGTATTCCTGATTTATCCACTAT 12713321 Query 169752 GACAGTCCTCATGGTTCTTTGC 169773 |||| || || |||||||| Sbjct 12713320 GACAATCTGGTTGATTCTTTGC 12713299 >seq36 Length=917149 Score = 141 bits (156), Expect = 1e-28 Identities = 189/260 (73%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 167890 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACT 167949 ||||| || || | || ||||| || || ||||||| || ||| | ||| | |||||| Sbjct 329970 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 329911 Query 167950 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 168008 ||||| || || |||||||| | || ||| || || || || || || || ||||| Sbjct 329910 -TCTGTATTTATTATCGCCTTCATTGCCATTCCTCCAGTAGATATTGATGGTATTCGTGA 329852 Query 168009 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTCCCTTC 168068 ||| || | || || || | ||||| ||||| || || || ||||| || | || | Sbjct 329851 ACCTGTTTCAGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGCCATTATTCCGAC 329792 Query 168069 TTCTAATGCTATTGGACTTCACTTCTATCCCATCTGGGAAGCAGCATCACTCGATGAGTG 168128 |||| ||||| || | ||||| ||||| ||||||||||| || || | ||||| || Sbjct 329791 TTCTGCAGCTATAGGTTTGCACTTTTATCCAATCTGGGAAGCGGCTTCTGTTGATGAATG 329732 Query 168129 GTTGTATAACGGTGGTCCTT 168148 ||| || ||||||||||||| Sbjct 329731 GTTATACAACGGTGGTCCTT 329712 >seq4826 Length=244980 Score = 132 bits (146), Expect = 6e-26 Identities = 147/196 (75%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 170124 TTGGCCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAG 170183 |||| || || || || || || || || || ||||| |||||| || | || |||| Sbjct 499 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 440 Query 170184 AAGATCCAGAATTTGAGACCTTCTACACCAAAAACATCCTATTGAATGAAGGACTTCGTG 170243 ||||||| ||||||||||| |||||||| ||||| || || || || ||||| |||||| Sbjct 439 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 380 Query 170244 CATGGTTGGCACCTGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTTCTTC 170303 | ||| |||| || ||||| || ||||||||| | || ||||| || || ||||| | Sbjct 379 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTAC 320 Query 170304 CGAGAGGTAACGCACT 170319 | | || ||||| || Sbjct 319 CCCGTGGAAACGCTCT 304 >seq1731 Length=31681 Score = 129 bits (142), Expect = 7e-25 Identities = 146/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 170124 TTGGCCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAG 170183 |||| || || || || || || || || || ||||| |||||| || | || |||| Sbjct 4297 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 4238 Query 170184 AAGATCCAGAATTTGAGACCTTCTACACCAAAAACATCCTATTGAATGAAGGACTTCGTG 170243 ||||||| ||||||||||| |||||||| ||||| || || || || ||||| |||||| Sbjct 4237 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 4178 Query 170244 CATGGTTGGCACCTGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTTCTTC 170303 | ||| |||| || ||||| || ||||||| | | || ||||| || || ||||| | Sbjct 4177 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAACCCTTATATTCCCTGAGGAGGTTCTAC 4118 Query 170304 CGAGAGGTAACGCACT 170319 | | || ||||| || Sbjct 4117 CCCGTGGAAACGCTCT 4102 >seq1 Length=51465339 Score = 116 bits (128), Expect = 4e-21 Identities = 177/253 (70%), Gaps = 17/253 (7%) Strand=Plus/Plus Query 168520 GGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTC 168579 ||||||| |||||| |||||||||||| | | || |||||| || |||||||||| | Sbjct 27733156 GGTTACAGGTTCGGGCAAGAAGAAGAAGCTTGTAATATCGTACCCACTCATGGTTATATT 27733215 Query 168580 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTT 168639 ||||| || || ||||||| ||| ||||||||||| | || || ||||||||||| Sbjct 27733216 GGTCGATTAATATTCCAATCTGCTAGTTTCAACAACTCTCATTCTTTACACTTCTTCCT- 27733274 Query 168640 GCTGCATGGCCTGTTGTCGGCATCTGGTTCAC-CGCCCTTGGCGTCTCCACGATGGCATT 168698 ||||| |||||||| || || || || ||| ||||| || Sbjct 27733275 -----------AGTTGT----ATCTGGTTTACTAGCTTAAGGTATCAGCACTATGGCTTT 27733319 Query 168699 CAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAA 168758 ||| || || ||||||| |||||||| || | ||||| |||| | |||| | || Sbjct 27733320 CAATCTAAATGGTTTCAGTTTCAACCAATCTGTAGTTGATAGTCAAGACTGTGTAATTAA 27733379 Query 168759 CACCTGGGCAGAT 168771 || ||||| ||| Sbjct 27733380 TACTTGGGCTGAT 27733392 >seq3 Length=50312079 Score = 107 bits (118), Expect = 2e-18 Identities = 142/196 (72%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 170124 TTGGCCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAG 170183 |||| || || || || || || || || || ||||| ||| || || | || |||| Sbjct 24072548 TTGGTCTAGCCCTGAACCTCCGCGCCTATGACTTCGTTCCTCAAGAAATTCGCGCGGCAG 24072489 Query 170184 AAGATCCAGAATTTGAGACCTTCTACACCAAAAACATCCTATTGAATGAAGGACTTCGTG 170243 ||||||| |||||||||| || ||| |||||| || || || || ||||| |||||| Sbjct 24072488 AAGATCCTGAATTTGAGATTTTTGACA-CAAAAATATTCTCTTAAACGAAGGTATTCGTG 24072430 Query 170244 CATGGTTGGCACCTGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTTCTTC 170303 | ||| |||| || ||||| || ||||||||| | || ||||| || | ||||| | Sbjct 24072429 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGGGGTTCTAC 24072370 Query 170304 CGAGAGGTAACGCACT 170319 | | || ||||| || Sbjct 24072369 CCCGTGGAAACGCTCT 24072354 Score = 105 bits (116), Expect = 8e-18 Identities = 143/197 (73%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 170124 TTGGCCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAG 170183 |||| || || || || | || || || || ||||| |||| | || | || |||| Sbjct 34945760 TTGGTCTAGCCCTGAACCCGCGCGCCTATGACTTCGTTTCTCAGAAAATTCGCGCGGCAG 34945819 Query 170184 AAGATCCAGAATTTGAGACCTTCTACACCAAAAACATCCTATTGAATGAAGGACTTCGTG 170243 ||||||| ||||||||||| |||||||| ||||| || || || || ||||| |||||| Sbjct 34945820 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 34945879 Query 170244 CATGGTTGGCACCTGCTGATCAACCACATGAAA-ACTTCATCTTCCCAGAAGAAGTTCTT 170302 | ||| |||| || ||||| | ||||||| |||| || ||||| || || ||| Sbjct 34945880 CTTGGATGGCGGCTCAAGATCAGACTCATGAAAGACTT-ATATTCCCTGAGGAGTATCTA 34945938 Query 170303 CCGAGAGGTAACGCACT 170319 || | || ||||| || Sbjct 34945939 CCCCGTGGAAACGCTCT 34945955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 574438944880080