Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq4825 675 0.0 seq6 435 3e-117 seq8 378 8e-100 seq36 165 9e-36 seq4 159 4e-34 seq4826 147 2e-30 seq1731 141 1e-28 seq3 125 8e-24 seq1 104 3e-17 >seq4825 Length=155848 Score = 675 bits (748), Expect = 0.0 Identities = 731/966 (76%), Gaps = 2/966 (0%) Strand=Plus/Minus Query 163812 AACCGCCTCTATGTTGGTTGGTTCGGCGTTCTGATGATCCCTACGCTGCTTGCAGCAACC 163871 ||||| || || |||| ||||| || ||| ||||||||||||| | | | ||||| Sbjct 1250 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 1191 Query 163872 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTGA 163930 ||||| || || |||||||| | |||||||| || || || || |||||||||||||| Sbjct 1190 -TCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 1132 Query 163931 ACCTGTTGCAGGTTCGCTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 163990 ||||||| | || || || | ||||| ||||| || || || ||||| || |||| | Sbjct 1131 ACCTGTTTCTGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGCCATTATTCCGAC 1072 Query 163991 GTCCAATGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAATG 164050 || || || ||| | ||||| || || || |||||||| || || |||||||||| Sbjct 1071 TTCTGCAGCTATAGGTTTGCACTTTTATCCAATCTGGGAAGCGGCTTCTGTTGATGAATG 1012 Query 164051 GCTTTACAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTTCCTGATCGGTATCTATGC 164110 | | |||||||||||||||| || | |||| | ||||| | | ||| | | Sbjct 1011 GTTATACAACGGTGGTCCTTATGAATTAATCGTTCTACACTTTTTACTTGGTGTAGCTTG 952 Query 164111 ATACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGTGT 164170 |||||||||||||||||||| || || |||||| |||||||| ||||||||| ||| Sbjct 951 TTACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGT 892 Query 164171 TGCTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCA 164230 ||| || || || || |||||||| || | || || ||| || |||| || ||||||| Sbjct 891 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCA 832 Query 164231 AGGTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTGGT 164290 ||| || ||||| | ||||| || || |||||||| || ||||||| |||| | || Sbjct 831 AGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 772 Query 164291 GTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGT 164350 ||||| || |||||||||||||| |||||||| || || ||| | ||||| ||||| || Sbjct 771 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGT 712 Query 164351 ATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCG 164410 ||| |||||||| || || ||||| ||||| |||||| |||| || ||| || | | Sbjct 711 ATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAG 652 Query 164411 TGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAAC 164470 |||||||| |||| ||| || || | ||||||| ||| || |||||||||||||| Sbjct 651 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAAC 592 Query 164471 ATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCATT 164530 || || || || |||||||| ||||| ||||| || | ||||||||||| ||| || Sbjct 591 TTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTT 532 Query 164531 CAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGGTT 164590 ||||||||| ||||| || ||||||||||| ||||| |||||||| || || |||||||| Sbjct 531 CAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTT 472 Query 164591 CACCGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTC 164650 || || | ||| | ||| ||||| |||||||| || |||||||| |||||||| || Sbjct 471 TACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATC 412 Query 164651 CATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCTGG 164710 | | ||| |||| || ||||| | || |||||||| || | | ||||||||| Sbjct 411 TGTAGTTGATAGTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGCGCTAA 352 Query 164711 TCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTCCCTCTGGATCTCGCTGC 164770 || |||||||||||||||||||| ||||| ||||| ||||||||||| || | ||||| Sbjct 351 CCTTGGTATGGAAGTTATGCACGAACGTAATGCTCATAACTTCCCTCTAGACTTAGCTGC 292 Query 164771 TGCTGA 164776 || ||| Sbjct 291 TGTTGA 286 Score = 590 bits (654), Expect = 7e-164 Identities = 737/1004 (73%), Gaps = 6/1004 (1%) Strand=Plus/Plus Query 165206 GATGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 165265 ||||||||| | | || |||||||||||||| || ||||| || || | || ||| Sbjct 33151 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGTCTATTGCTCTTT 33210 Query 165266 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGCGACGAGTTGG 165325 || ||| ||| | ||| | || || ||| | || || || || || | || ||| Sbjct 33211 CCTTGTGCCTATTTCGCTGTAGGAGGCTGGTTCACAGGTACAACCTTTGTAACTTCATGG 33270 Query 165326 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGG-TGCAAACTTTCTTA-CTGCGGCAG 165383 ||||| || || ||||| ||||||||| |||| || ||||| ||||||| |||| |||| Sbjct 33271 TATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAA--TTTCTTAACTGCCGCAG 33328 Query 165384 TTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTC 165443 |||||||||| || | | | | |||||| | || | || ||||||||||| || | Sbjct 33329 TTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTGTGGGGTCCTGAAGCAC 33388 Query 165444 AAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACG 165503 |||||||||| | ||| ||| | || || || ||| ||||||| || ||||| | Sbjct 33389 AAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCCCTCCATG 33448 Query 165504 GGGCTTTCGCTCTAATTGGTTTCATGCTTCGTCAGTTTGAATTAGCACG-TCTCATCGGT 165562 | ||||||| ||||| || |||||| | ||||| || ||| | || || ||| || | Sbjct 33449 GTGCTTTCGGACTAATAGGCTTCATGTTACGTCAATTCGAACTTGCTCGATCTGTTCAAT 33508 Query 165563 ATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTT 165622 | || || || ||||| || ||||| |||||||| || |||||||||||| || || Sbjct 33509 -TGCGACCTTATAATGCAATCGCGTTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTC 33567 Query 165623 CTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCA 165682 || || || || || || ||||| ||||||| || || ||| ||| || || ||||| Sbjct 33568 CTGATTTATCCACTAGGACAATCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCAGCT 33627 Query 165683 ATCTTCAGGTTCCTTCTCTTCCTACAAGGATTCCATAACTGGACCTTGAATCCCTTTCAT 165742 || || | ||| | ||||| | |||||||| ||||| ||||| || || || |||||| Sbjct 33628 ATATTTCGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACATTAAACCCATTTCAT 33687 Query 165743 ATGATGGGTGTTGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACA 165802 |||||||| |||||||| | |||| | ||| ||||| | || || ||||||| ||| Sbjct 33688 ATGATGGGAGTTGCAGGGGTATTGGGCGCTGCTTTGCTATGCGCTATTCATGGTGCTACT 33747 Query 165803 GTAGAGAATACTCTGTATCAAGATGGTGACGATGCAAATACTTTCAAGGCATTTGACTCT 165862 ||||| |||||| | | | |||||||||| | ||||||||| ||| || ||| || | Sbjct 33748 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 33807 Query 165863 ACTCAAGAGGAAGAAACCTACTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTC 165922 ||||||| |||||||| || |||||||| || || ||||| || ||||| || ||||| Sbjct 33808 ACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCGAACCGCTTTTGGTCCCAAATCTTT 33867 Query 165923 GGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATG 165982 || |||| ||| ||||| | ||||| |||||||||||| | ||||| || || | Sbjct 33868 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACT 33927 Query 165983 GGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGAC 166042 ||| | |||| ||| | | || | ||||||| || || ||||| || || |||||| Sbjct 33928 GGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTGCGCGCCTATGAC 33987 Query 166043 TTTGTATCCCAAGAGATCAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACGAAA 166102 || || || || || || | || |||||||| || || ||||| || |||||||| ||| Sbjct 33988 TTCGTTTCTCAGGAAATTCGCGCGGCAGAAGATCCTGAATTTGAGACTTTCTACACAAAA 34047 Query 166103 AACATTCTCTTGAATGAAGGTCTTCGTGCTTGGTTGGCACCAGTCGATCAACCGCATGAG 166162 || |||||||| || |||||| ||||||||||| |||| | ||||| || ||||| Sbjct 34048 AATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 34107 Query 166163 AACTTTGTCTTCCCTGAAGAAGTTCTGCCTAGGGGTAACGCGCT 166206 ||| || | |||||||| || ||||| || | || ||||| || Sbjct 34108 AACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 34151 >seq6 Length=36610139 Score = 435 bits (482), Expect = 3e-117 Identities = 459/603 (76%), Gaps = 1/603 (0%) Strand=Plus/Plus Query 164124 GAGTGGGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGTGTTGCTTACTCTGCA 164183 ||| |||| || || |||||| |||||||| ||||||||| |||||| || || || Sbjct 34152490 GAGAGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCT 34152549 Query 164184 CCCGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCGTTCTCT 164243 || |||||||| || | || || ||| || |||| || |||||||||| || ||| Sbjct 34152550 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCT 34152609 Query 164244 GACGCAATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTGGTGTTCCAAGCAGAG 164303 || | ||||| || || |||||||| || ||||||| |||| | || ||||| || ||| Sbjct 34152610 GATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAG 34152669 Query 164304 CACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGTATTTGGCGGTTCT 164363 ||||||||||| |||||||| || || ||| | ||||| ||||| ||||| |||||||| Sbjct 34152670 CACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCC 34152729 Query 164364 CTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCGTGAAACCACCGAA 164423 || || ||||| ||||| |||||| |||| || ||| || | | |||||||| ||| Sbjct 34152730 CTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAA 34152789 Query 164424 ACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAACATACAACATTGTT 164483 | ||| || || | ||||||| ||| || |||||||||||||| || || || || Sbjct 34152790 AATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTA 34152849 Query 164484 GCCGCTCACGGTTACTTTGGT-CGTCTGATCTTCCAATACGCTTCATTCAACAACTCCCG 164542 |||||||| ||||| |||||| || | ||||||||||| ||| ||||||||||| || Sbjct 34152850 GCCGCTCATGGTTATTTTGGTCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCG 34152909 Query 164543 TTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGGTTCACCGCACTTGG 164602 ||| || ||||||||||| ||||| |||||||| || || |||||||| || || | || Sbjct 34152910 TTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGG 34152969 Query 164603 TGTTTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGG 164662 | | ||| ||||| |||||||| || |||||||| |||||||| || | | ||| | Sbjct 34152970 TATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAG 34153029 Query 164663 TCAGGGTCGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCTGGTCTGGGTATGGA 164722 ||| || ||||| | || |||||||| || | | ||||||||| || |||||||| Sbjct 34153030 TCAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGA 34153089 Query 164723 AGT 164725 || Sbjct 34153090 GGT 34153092 >seq8 Length=31745509 Score = 378 bits (418), Expect = 8e-100 Identities = 362/464 (78%), Gaps = 0/464 (0%) Strand=Plus/Plus Query 164112 TACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGTGTT 164171 |||||||||||||||||||| || || |||||| |||||||| ||||||||| |||| Sbjct 5168713 TACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTT 5168772 Query 164172 GCTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAA 164231 || || || || || |||||||| || | || || ||| || |||| || |||||||| Sbjct 5168773 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAA 5168832 Query 164232 GGTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTGGTG 164291 || || ||||| | ||||| || || |||||||| || ||||||| |||| | || Sbjct 5168833 GGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTA 5168892 Query 164292 TTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGTA 164351 ||||| || |||||||||||||| |||||||| || || ||| | ||||| ||||| ||| Sbjct 5168893 TTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTA 5168952 Query 164352 TTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCGT 164411 || |||||||| || || ||||| ||||| |||||| |||| || ||| || | | Sbjct 5168953 TTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGG 5169012 Query 164412 GAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAACA 164471 |||||||| |||| ||| || || | ||||||| ||| || |||||||||||||| Sbjct 5169013 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACT 5169072 Query 164472 TACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCATTC 164531 || || || || |||||||| ||||| ||||| || | ||||||||||| ||| ||| Sbjct 5169073 TATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTC 5169132 Query 164532 AACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGT 164575 |||||||| ||||| || ||||||||||| ||||| |||||||| Sbjct 5169133 AACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGT 5169176 Score = 118 bits (130), Expect = 1e-21 Identities = 134/177 (76%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 163812 AACCGCCTCTATGTTGGTTGGTTCGGCGTTCTGATGATCCCTACGCTGCTTGCAGCAACC 163871 ||||| || || |||| ||||| || ||| ||||||||||||| | | | ||||| Sbjct 2878712 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 2878771 Query 163872 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTGA 163930 ||||| || || |||||||| | |||||||| || || || || |||||||||||||| Sbjct 2878772 -TCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 2878830 Query 163931 ACCTGTTGCAGGTTCGCTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCC 163987 ||||||| | || || || | ||||| ||||| || || || ||||| || |||| Sbjct 2878831 ACCTGTTTCTGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGCCATTATTCC 2878887 >seq36 Length=917149 Score = 165 bits (182), Expect = 9e-36 Identities = 194/260 (75%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 163812 AACCGCCTCTATGTTGGTTGGTTCGGCGTTCTGATGATCCCTACGCTGCTTGCAGCAACC 163871 ||||| || || |||| ||||| || ||| ||||||||||||| | | | ||||| Sbjct 329970 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 329911 Query 163872 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTGA 163930 ||||| || || |||||||| | || ||| || || || || |||||||||||||| Sbjct 329910 -TCTGTATTTATTATCGCCTTCATTGCCATTCCTCCAGTAGATATTGATGGTATTCGTGA 329852 Query 163931 ACCTGTTGCAGGTTCGCTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 163990 ||||||| |||| || || | ||||| ||||| || || || ||||| || |||| | Sbjct 329851 ACCTGTTTCAGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGCCATTATTCCGAC 329792 Query 163991 GTCCAATGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAATG 164050 || || || ||| | ||||| || || || |||||||| || || |||||||||| Sbjct 329791 TTCTGCAGCTATAGGTTTGCACTTTTATCCAATCTGGGAAGCGGCTTCTGTTGATGAATG 329732 Query 164051 GCTTTACAACGGTGGTCCTT 164070 | | |||||||||||||||| Sbjct 329731 GTTATACAACGGTGGTCCTT 329712 >seq4 Length=35924511 Score = 159 bits (176), Expect = 4e-34 Identities = 184/248 (74%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 164529 TTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGG 164588 ||||||||||| ||||| || ||||||||||| ||||| |||||||| | | |||||| Sbjct 4757228 TTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAATAAGTATCTGG 4757287 Query 164589 TTCACCGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 164648 || || || | ||| | ||| ||| | |||||||| || | |||||| |||||||| Sbjct 4757288 TTTACTGCTTTAGGTATCAGCACTATGACTTTCAACCTAAATGATTTCAATTTCAACCAA 4757347 Query 164649 TCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCT 164708 || | | ||| |||| | |||| | || ||||| || || | | ||||||||| Sbjct 4757348 TCTGTAGTTGATAGTCAAGCCTGTGTAATTAATACTTGAGCTGATATCATTAACCGCGCT 4757407 Query 164709 GGTCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTCCCTCTGGATCTCGCT 164768 ||| |||| |||||||||| ||| | ||| ||||| |||||| |||| || | ||| Sbjct 4757408 AATCTTGGTAAAGAAGTTATGCTCGAACATAATGCTCATAACTTCTCTCTAGACTTAGCT 4757467 Query 164769 GCTGCTGA 164776 |||| ||| Sbjct 4757468 GCTGTTGA 4757475 >seq4826 Length=244980 Score = 147 bits (162), Expect = 2e-30 Identities = 150/196 (77%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 166011 TTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAG 166070 ||||||| || || ||||| || || |||||||| || || || || || | || |||| Sbjct 499 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 440 Query 166071 AAGACCCAGAGTTTGAAACCTTCTACACGAAAAACATTCTCTTGAATGAAGGTCTTCGTG 166130 |||| || || ||||| || |||||||| ||||| |||||||| || |||||| |||||| Sbjct 439 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 380 Query 166131 CTTGGTTGGCACCAGTCGATCAACCGCATGAGAACTTTGTCTTCCCTGAAGAAGTTCTGC 166190 ||||| |||| | ||||| || ||||| ||| || | |||||||| || ||||| | Sbjct 379 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTAC 320 Query 166191 CTAGGGGTAACGCGCT 166206 | | || ||||| || Sbjct 319 CCCGTGGAAACGCTCT 304 >seq1731 Length=31681 Score = 141 bits (156), Expect = 1e-28 Identities = 149/196 (76%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 166011 TTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAG 166070 ||||||| || || ||||| || || |||||||| || || || || || | || |||| Sbjct 4297 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 4238 Query 166071 AAGACCCAGAGTTTGAAACCTTCTACACGAAAAACATTCTCTTGAATGAAGGTCTTCGTG 166130 |||| || || ||||| || |||||||| ||||| |||||||| || |||||| |||||| Sbjct 4237 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 4178 Query 166131 CTTGGTTGGCACCAGTCGATCAACCGCATGAGAACTTTGTCTTCCCTGAAGAAGTTCTGC 166190 ||||| |||| | ||||| || ||||| | | || | |||||||| || ||||| | Sbjct 4177 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAACCCTTATATTCCCTGAGGAGGTTCTAC 4118 Query 166191 CTAGGGGTAACGCGCT 166206 | | || ||||| || Sbjct 4117 CCCGTGGAAACGCTCT 4102 >seq3 Length=50312079 Score = 125 bits (138), Expect = 8e-24 Identities = 146/196 (74%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 166011 TTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAG 166070 ||||||| || || ||||| || || |||||||| || | ||||| || | || |||| Sbjct 24072548 TTGGTCTAGCCCTGAACCTCCGCGCCTATGACTTCGTTCCTCAAGAAATTCGCGCGGCAG 24072489 Query 166071 AAGACCCAGAGTTTGAAACCTTCTACACGAAAAACATTCTCTTGAATGAAGGTCTTCGTG 166130 |||| || || ||||| | || |||| ||||| |||||||| || |||||| |||||| Sbjct 24072488 AAGATCCTGAATTTGAGATTTTTGACAC-AAAAATATTCTCTTAAACGAAGGTATTCGTG 24072430 Query 166131 CTTGGTTGGCACCAGTCGATCAACCGCATGAGAACTTTGTCTTCCCTGAAGAAGTTCTGC 166190 ||||| |||| | ||||| || ||||| ||| || | |||||||| | ||||| | Sbjct 24072429 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGGGGTTCTAC 24072370 Query 166191 CTAGGGGTAACGCGCT 166206 | | || ||||| || Sbjct 24072369 CCCGTGGAAACGCTCT 24072354 Score = 114 bits (126), Expect = 1e-20 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 166011 TTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAG 166070 ||||||| || || |||| || || |||||||| || || || | || | || |||| Sbjct 34945760 TTGGTCTAGCCCTGAACCCGCGCGCCTATGACTTCGTTTCTCAGAAAATTCGCGCGGCAG 34945819 Query 166071 AAGACCCAGAGTTTGAAACCTTCTACACGAAAAACATTCTCTTGAATGAAGGTCTTCGTG 166130 |||| || || ||||| || |||||||| ||||| |||||||| || |||||| |||||| Sbjct 34945820 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 34945879 Query 166131 CTTGGTTGGCACCAGTCGATCAACCGCATGAGAACTTTGTCTTCCCTGAAGAAGTTCTGC 166190 ||||| |||| | ||||| | ||||| | || | |||||||| || ||| | Sbjct 34945880 CTTGGATGGCGGCTCAAGATCAGACTCATGAAAGACTTATATTCCCTGAGGAGTATCTAC 34945939 Query 166191 CTAGGGGTAACGCGCT 166206 | | || ||||| || Sbjct 34945940 CCCGTGGAAACGCTCT 34945955 >seq1 Length=51465339 Score = 104 bits (114), Expect = 3e-17 Identities = 223/336 (66%), Gaps = 33/336 (10%) Strand=Plus/Plus Query 164442 GGTTACAAGTTTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTACTTT 164501 ||||||| ||| || |||||||||||| | | || || || || |||| ||||| || Sbjct 27733156 GGTTACAGGTTCGGGCAAGAAGAAGAAGCTTGTAATATCGTACCCACTCATGGTTATATT 27733215 Query 164502 GGTCGTCTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 164561 ||||| | || ||||||| ||| ||||||||||| | ||| || ||||||||||| Sbjct 27733216 GGTCGATTAATATTCCAATCTGCTAGTTTCAACAACTCTCATTCTTTACACTTCTTCCT- 27733274 Query 164562 GCTGCATGGCCTGTTGTTGGCATCTGGTTCAC-CGCACTTGGTGTTTCCACGATGGCATT 164620 ||||| |||||||| || || ||| | ||| ||||| || Sbjct 27733275 -----------AGTTGT----ATCTGGTTTACTAGCTTAAGGTATCAGCACTATGGCTTT 27733319 Query 164621 CAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAA 164680 ||| || || ||||||| |||||||| || | | ||| |||| | |||| | || Sbjct 27733320 CAATCTAAATGGTTTCAGTTTCAACCAATCTGTAGTTGATAGTCAAGACTGTGTAATTAA 27733379 Query 164681 CACTTGGGCAGACGTTCTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAA 164740 |||||||| || | ||||| ||| || |||| || |||| Sbjct 27733380 TACTTGGGCTGATATCGATAACCGTGCTAAGCTTGGTA--------AT--------GTAA 27733423 Query 164741 CGCTCACAACTTCCCTCTGGATCTCGCTGCTGCTGA 164776 ||||| ||||||||||| || | ||||||| ||| Sbjct 27733424 TGCTCATAACTTCCCTCTAGACTTAGCTGCTGTTGA 27733459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556891203511440