Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq4825 517 1e-141 seq6 354 1e-92 seq8 282 5e-71 seq36 125 8e-24 seq4826 123 3e-23 seq1731 120 4e-22 seq4 116 4e-21 seq3 102 1e-16 seq1 86.0 7e-12 >seq4825 Length=155848 Score = 517 bits (572), Expect = 1e-141 Identities = 711/991 (72%), Gaps = 6/991 (1%) Strand=Plus/Minus Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879 ||||| | ||| ||||| || | ||| | |||| |||| ||||| ||||| | Sbjct 1277 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1218 Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939 |||||||| ||| | || ||| | | || || | || |||||||| || ||| Sbjct 1217 ATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGCTGCTCCT 1158 Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 171999 || || ||||| || || || | ||||| ||| | || ||| | | ||||| ||||| Sbjct 1157 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACAAT 1098 Query 172000 ATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATC 172059 || || || ||||| || |||| | || || |||||| | ||||| || || ||| Sbjct 1097 ATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAATC 1038 Query 172060 TGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATC 172119 |||||||| || | || ||||||||||| ||||| |||||||||||| | || |||| Sbjct 1037 TGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGTCCTTATGAATT---AATC 981 Query 172120 -TTC--CACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATAC 172176 ||| ||||| | | ||| | | |||||||| | ||||||| || | | Sbjct 980 GTTCTACACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTC 921 Query 172177 AGATTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTT 172236 | |||||||| |||| ||||| ||| ||||||||||| ||||| |||| || | Sbjct 920 CGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACT 861 Query 172237 GCTGTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGT 172296 ||||| ||| | | || ||| ||||||| || || |||||||||||||| ||||| Sbjct 860 GCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGA 801 Query 172297 ATCTCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCAT 172356 ||||| ||||| |||||||| ||| | || ||||| || ||||| ||||| || ||||| Sbjct 800 ATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCAC 741 Query 172357 CCTTTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCAC 172416 || || |||||| ||| ||||| || | || || || || |||| || ||||| Sbjct 740 CCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCAT 681 Query 172417 GGTTCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTAC 172476 |||||||| || || ||| | | ||||| || || || ||| ||||| || | Sbjct 680 GGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 621 Query 172477 GGATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTT 172536 || |||| |||||| |||||||||||||| || || || ||||| || || ||||| ||| Sbjct 620 GGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTT 561 Query 172537 GGTCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTA 172596 || || | |||||||| |||||| |||||||||||| | | | |||||||||||| Sbjct 560 GGCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTA 501 Query 172597 GCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTC 172656 || | || ||||| ||| || | ||||| || || | |||||| | || ||||| ||| Sbjct 500 GCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGGCTTTC 441 Query 172657 AACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCT 172716 ||||| || |||||||| ||||||||||| || || ||| | | || | || | Sbjct 440 AACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAAT 381 Query 172717 ACATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAAT 172776 || |||| ||| | ||||| | || ||||| ||||||||||||||||| ||| | ||| Sbjct 380 ACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCACGAACGTAAT 321 Query 172777 GCACACAACTTCCCATTAGACCTTGCTTCTG 172807 || || |||||||| ||||| | ||| ||| Sbjct 320 GCTCATAACTTCCCTCTAGACTTAGCTGCTG 290 Score = 367 bits (406), Expect = 2e-96 Identities = 702/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Plus Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010 |||||| || | || ||||||||| ||| || |||||||| || | |||||||| ||| Sbjct 33139 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGT 33198 Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070 || || || | |||||||| || | || | || || |||||| ||| || ||||| Sbjct 33199 CTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGAGGCTGGTTCACAGGTACAACCTTT 33258 Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130 || || ||||||||||| ||||| | || ||| ||| | ||||| || || ||| Sbjct 33259 GTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAATTTCTTA 33318 Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGA 173190 || || ||||| || || |||| | | | ||| | | |||| || ||||| Sbjct 33319 ACTGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTGTGGGGT 33378 Query 173191 CCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACTTTGTA 173250 |||||||||||||| || ||||||| ||| | || || || |||| ||||| Sbjct 33379 CCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTT 33438 Query 173251 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGCAGGA 173310 || | ||||| | || ||||| ||||| |||||| | ||||| || || | || || Sbjct 33439 GCCCTCCATGGTGCTTTCGGACTAATAGGCTTCATGTTACGTCAATTCGAACTTGCTCGA 33498 Query 173311 CTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACT 173370 ||| | ||||||| || ||| |||| || |||| | || || || || | Sbjct 33499 TCTGTTCAATTGCGACCTTATAATGCAATCGCGTTTTCTGGTCCAATTGCTGTTTTTGTT 33558 Query 173371 AGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCGGT 173430 | || | || || |||||||| || |||||||||| || || || ||| Sbjct 33559 TCTGTATTCCTGATTTATCCACTAGGACAATCTGGTTGGTTCTTTGCGCCAAGTTTTGGT 33618 Query 173431 GTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAAT 173490 || ||||| || ||||| | ||| | || | ||||| || || || ||||| || Sbjct 33619 GTAGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACATTAAAC 33678 Query 173491 CCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCAT 173550 |||||||| |||||||| |||||||| || | || | || || ||||| || |||||| Sbjct 33679 CCATTTCATATGATGGGAGTTGCAGGGGTATTGGGCGCTGCTTTGCTATGCGCTATTCAT 33738 Query 173551 GGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTAAGATT 173610 ||||| || || | || || || | ||||| || ||| ||| Sbjct 33739 GGTGCTACTGTAGAAAATACTTTATTTGAAG------------ATGGTGATGGT------ 33780 Query 173611 CAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 173670 | | || ||| | || ||| | || || || | |||||||||||| ||| | Sbjct 33781 ---GCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTC 33837 Query 173671 ACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTA 173730 || |||||| | || ||||| || || ||||| | || ||||| || ||| | | ||| Sbjct 33838 ACCGCGAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 33897 Query 173731 CACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTA 173790 || ||| | ||||| || ||||| || | ||| | |||| | | || | || Sbjct 33898 CATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTT 33957 Query 173791 GGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 173850 ||||| || || ||||| | || || ||||| || ||||| || || | || |||||| Sbjct 33958 GGTCTGGCCCTGAACCTGCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAGAA 34017 Query 173851 GATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCA 173910 ||||| || || |||||||||||||| || ||||| || | || |||||||| | || Sbjct 34018 GATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTGCT 34077 Query 173911 TGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTACCA 173970 |||||| | || |||||| || ||||| ||| | |||| || || || || |||| Sbjct 34078 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCC 34137 Query 173971 AGAGGTAACGCACTTTAA 173988 | || ||||| |||||| Sbjct 34138 CGTGGAAACGCTCTTTAA 34155 >seq6 Length=36610139 Score = 354 bits (392), Expect = 1e-92 Identities = 428/581 (74%), Gaps = 1/581 (0%) Strand=Plus/Plus Query 172181 TAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCTG 172240 |||||||| |||| ||||| ||| ||||||||||| ||||| |||| || ||||| Sbjct 34152512 TAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTG 34152571 Query 172241 TGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCT 172300 | ||| | | || ||| ||||||| || || |||||||||||||| ||||| |||| Sbjct 34152572 TTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCT 34152631 Query 172301 CAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCTT 172360 | ||||| |||||||| ||| | || ||||| || ||||| ||||| || ||||| || | Sbjct 34152632 CTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCAT 34152691 Query 172361 TCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGTT 172420 | |||||| ||| ||||| || | || || || || |||| || ||||| |||| Sbjct 34152692 TTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTT 34152751 Query 172421 CTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGAT 172480 |||| || || ||| | | ||||| || || || ||| ||||| || | || | Sbjct 34152752 CTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTT 34152811 Query 172481 ACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGT- 172539 ||| |||||| |||||||||||||| || || || ||||| || || ||||| |||||| Sbjct 34152812 ACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGTC 34152871 Query 172540 CGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 172599 || | |||||||| |||||| |||||||||||| | | | |||||||||||||| Sbjct 34152872 CGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCT 34152931 Query 172600 GTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 172659 | || ||||| ||| || | ||||| || || | |||||| | || ||||| |||||| Sbjct 34152932 GCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGGCTTTCAAC 34152991 Query 172660 CTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACA 172719 || || |||||||| ||||||||||| || || ||| | | || | || ||| Sbjct 34152992 CTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATACT 34153051 Query 172720 TGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGT 172760 |||| ||| | ||||| | || ||||| |||||||| || Sbjct 34153052 TGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAGGT 34153092 >seq8 Length=31745509 Score = 282 bits (312), Expect = 5e-71 Identities = 341/464 (73%), Gaps = 0/464 (0%) Strand=Plus/Plus Query 172147 TACATGGGAAGACAGTGGGAACTATCATACAGATTAGGTATGAGACCATGGATATGTGTA 172206 |||||||| | ||||||| || | | | |||||||| |||| ||||| ||| Sbjct 5168713 TACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTT 5168772 Query 172207 GCATATTCAGCACCTGTATCAGCAGCATTTGCTGTGTTCCTTGTGTATCCATTCGGTCAG 172266 ||||||||||| ||||| |||| || |||||| ||| | | || ||| ||||||| Sbjct 5168773 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAA 5168832 Query 172267 GGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTTATGTTCGTG 172326 || || |||||||||||||| ||||| ||||| ||||| |||||||| ||| | || Sbjct 5168833 GGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTA 5168892 Query 172327 TTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATG 172386 ||||| || ||||| ||||| || ||||| || || |||||| ||| ||||| || | Sbjct 5168893 TTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTA 5168952 Query 172387 TTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCTTTAGTTACATCTTCTCTAATCAGA 172446 || || || || |||| || ||||| |||||||| || || ||| | | ||||| Sbjct 5168953 TTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGG 5169012 Query 172447 GAGACAACTGAAGCAGAATCACAGAACTACGGATACAAGTTCGGACAAGAAGAAGAAACA 172506 || || || ||| ||||| || | || |||| |||||| |||||||||||||| Sbjct 5169013 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACT 5169072 Query 172507 TACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTC 172566 || || || ||||| || || ||||| ||||| || | |||||||| |||||| |||| Sbjct 5169073 TATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTC 5169132 Query 172567 AACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTTTTCCCTGT 172610 |||||||| | | | |||||||||||||| | || ||||| Sbjct 5169133 AACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGT 5169176 >seq36 Length=917149 Score = 125 bits (138), Expect = 8e-24 Identities = 180/254 (71%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 171854 TTTATGTTGGTTGGTTCGGTGTACTCATGATCCCATGTTTGCTCACAGCAGCAGCATGCT 171913 |||| |||| ||||| ||||| | |||||||| ||| | || ||| | | | Sbjct 329963 TTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTCTGTAT 329904 Query 171914 TCATCGTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTTG 171973 | || | || |||||||| ||||| || ||||| || || || | ||||| ||| Sbjct 329903 TTATTATCGCCTTCATTGCCATTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTT 329844 Query 171974 CGGGTTCTTTCTTATATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACG 172033 | || ||| | | ||||| ||||| || || || ||||| || |||| | || | Sbjct 329843 CAGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGCCATTATTCCGACTTCTGCAG 329784 Query 172034 CAATAGGTCTCCACTTCTACCCTATCTGGGAAGCAGCAACCGTAGATGAATGGTTGTACA 172093 | |||||| | ||||| || || ||||||||||| || | || ||||||||||| |||| Sbjct 329783 CTATAGGTTTGCACTTTTATCCAATCTGGGAAGCGGCTTCTGTTGATGAATGGTTATACA 329724 Query 172094 ATGGTGGTCCTTAT 172107 | |||||||||||| Sbjct 329723 ACGGTGGTCCTTAT 329710 >seq4826 Length=244980 Score = 123 bits (136), Expect = 3e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 173788 GTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCA 173847 || ||||| || || ||||| | || || ||||| || ||||| || || | || ||| Sbjct 500 GTTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCA 441 Query 173848 GAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGA 173907 |||||||| || || |||||||||||||| || ||||| || | || |||||||| | Sbjct 440 GAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGT 381 Query 173908 GCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTA 173967 || |||||| | || |||||| || ||||| ||| | |||| || || || || || Sbjct 380 GCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTA 321 Query 173968 CCAAGAGGTAACGCACTTTAA 173988 || | || ||||| |||||| Sbjct 320 CCCCGTGGAAACGCTCTTTAA 300 >seq1731 Length=31681 Score = 120 bits (132), Expect = 4e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 173788 GTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCA 173847 || ||||| || || ||||| | || || ||||| || ||||| || || | || ||| Sbjct 4298 GTTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCA 4239 Query 173848 GAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGA 173907 |||||||| || || |||||||||||||| || ||||| || | || |||||||| | Sbjct 4238 GAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGT 4179 Query 173908 GCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTA 173967 || |||||| | || |||||| || ||||| | | | |||| || || || || || Sbjct 4178 GCTTGGATGGCGGCTCAAGATCAGCCTCATGAAACCCTTATATTCCCTGAGGAGGTTCTA 4119 Query 173968 CCAAGAGGTAACGCACTTTAA 173988 || | || ||||| |||||| Sbjct 4118 CCCCGTGGAAACGCTCTTTAA 4098 >seq4 Length=35924511 Score = 116 bits (128), Expect = 4e-21 Identities = 184/264 (70%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 172555 TATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTTTTCCCTGTTGTA 172614 |||||| |||||||||||| | | | |||||||||||||| | || ||||| || Sbjct 4757219 TATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAATA 4757278 Query 172615 TGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGGTTTCAAC 172674 || | ||||| || || | |||||| | || ||| | |||||||| || | |||||| Sbjct 4757279 AGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGACTTTCAACCTAAATGATTTCAAT 4757338 Query 172675 TTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACATGGGGTGACGTTCTT 172734 ||||||||||| || || ||| | | | | || ||| || | ||| | || Sbjct 4757339 TTCAACCAATCTGTAGTTGATAGTCAAGCCTGTGTAATTAATACTTGAGCTGATATCATT 4757398 Query 172735 AACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCATTA 172794 ||| | || || || |||| |||||||||| ||| ||||| || |||||| | || Sbjct 4757399 AACCGCGCTAATCTTGGTAAAGAAGTTATGCTCGAACATAATGCTCATAACTTCTCTCTA 4757458 Query 172795 GACCTTGCTTCTGCAGAGTCTTCA 172818 ||| | ||| ||| || ||||| Sbjct 4757459 GACTTAGCTGCTGTTGAAGCTTCA 4757482 >seq3 Length=50312079 Score = 102 bits (112), Expect = 1e-16 Identities = 144/201 (72%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 173788 GTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCA 173847 || ||||| || || ||||| | || || ||||| || ||||||| || | || ||| Sbjct 24072549 GTTGGTCTAGCCCTGAACCTCCGCGCCTATGACTTCGTTCCTCAAGAAATTCGCGCGGCA 24072490 Query 173848 GAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGA 173907 |||||||| || || |||| ||| |||| || ||||| || | || |||||||| | Sbjct 24072489 GAAGATCCTGAATTTGAGATTTTTGACAC-AAAAATATTCTCTTAAACGAAGGTATTCGT 24072431 Query 173908 GCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTA 173967 || |||||| | || |||||| || ||||| ||| | |||| || || | || || Sbjct 24072430 GCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGGGGTTCTA 24072371 Query 173968 CCAAGAGGTAACGCACTTTAA 173988 || | || ||||| |||||| Sbjct 24072370 CCCCGTGGAAACGCTCTTTAA 24072350 Score = 100 bits (110), Expect = 3e-16 Identities = 147/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 173788 GTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCA 173847 || ||||| || || |||| | || || ||||| || ||||| | || | || ||| Sbjct 34945759 GTTGGTCTAGCCCTGAACCCGCGCGCCTATGACTTCGTTTCTCAGAAAATTCGCGCGGCA 34945818 Query 173848 GAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGA 173907 |||||||| || || |||||||||||||| || ||||| || | || |||||||| | Sbjct 34945819 GAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGT 34945878 Query 173908 GCATGGATGTCATCTGTAGATCAACCACATGAGA-ACTTCGTATTTCCAGAAGAAGTGT- 173965 || |||||| | || |||||| | ||||| | |||| |||| || | || ||| | Sbjct 34945879 GCTTGGATGGCGGCTCAAGATCAGACTCATGAAAGACTT-ATATTCCCTG-AGGAGTATC 34945936 Query 173966 TACCAAGAGGTAACGCACTTTAA 173988 |||| | || ||||| |||||| Sbjct 34945937 TACCCCGTGGAAACGCTCTTTAA 34945959 >seq1 Length=51465339 Score = 86.0 bits (94), Expect = 7e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 159694 GGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGA 159753 ||||| ||||| |||||| | || | || ||||||||||| ||||| ||||| || || Sbjct 36029512 GGTGCTGATGTTTGTCATTTGAATCTCCACAAGACATTCTGCATTCCCCATGGTGGAGGT 36029453 Query 159754 GGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACA 159788 ||||||||| | || |||||||||||| ||| || Sbjct 36029452 GGTCCTGGCATGGGCCCTATTGGTGTAAAAAAGCA 36029418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588015725811360