Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq4825 639 2e-178 seq6 439 3e-118 seq8 360 2e-94 seq4 168 8e-37 seq36 140 4e-28 seq4826 122 1e-22 seq1 122 1e-22 seq1731 116 5e-21 seq3 104 3e-17 >seq4825 Length=155848 Score = 639 bits (708), Expect = 2e-178 Identities = 730/975 (75%), Gaps = 8/975 (1%) Strand=Plus/Minus Query 181815 ACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCG 181874 ||| | || ||||| || | || ||||||||||| |||||||||| ||| | ||| | Sbjct 1256 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 1197 Query 181875 GCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTAT 181933 ||||| ||||| || || | || ||| | || || ||||| || ||||| || ||||| Sbjct 1196 GCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTAT 1138 Query 181934 CCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGT 181993 || ||||| || |||| || || | ||||| ||||| || || || ||||| || | Sbjct 1137 TCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGCCATTAT 1078 Query 181994 CCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGA 182053 || | || || || ||| | ||||| || |||||||||||||| || || |||| Sbjct 1077 TCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAATCTGGGAAGCGGCTTCTGTTGA 1018 Query 182054 TGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCAT 182113 ||| ||| | || ||||||||||||| || | | ||| | ||||| | | || | Sbjct 1017 TGAATGGTTATACAACGGTGGTCCTTATGAATTAATCGTTCTACACTTTTTACTTGG--T 960 Query 182114 CTACGCCT---ACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTG 182170 || || | ||||||| ||||||||||| ||| || ||| |||||||||| || || Sbjct 959 GTA-GCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTG 901 Query 182171 GATCTGTGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCC 182230 ||| ||| ||||| || ||||| || || || || ||||||| ||||| |||| || Sbjct 900 GATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCC 841 Query 182231 TTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTA 182290 |||||||||| || || |||| ||||| || |||||||| || || ||||||| Sbjct 840 AATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTT 781 Query 182291 TATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGT 182350 ||| | || ||||| |||||||||||||| |||||||| || || |||||||| || || Sbjct 780 CATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGT 721 Query 182351 AGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTC 182410 ||| ||||||||||| ||||| || |||||||| ||||| ||||||||||| || ||| Sbjct 720 AGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAG 661 Query 182411 ACTCGTCCGTGAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGA 182470 | || | || || || || | || || || | ||||||| |||||| ||||| Sbjct 660 TTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGA 601 Query 182471 AGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATA 182530 |||||| || ||||| ||||| || || ||||| || || || || || ||||||||||| Sbjct 600 AGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATA 541 Query 182531 CGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGG 182590 || ||||||||||| ||||| || ||||||||||| ||||| |||||||| || || Sbjct 540 TGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGG 481 Query 182591 AATCTGGTTCACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTT 182650 |||||||| || || | ||| || ||| ||||| |||||||| || |||||||| || Sbjct 480 TATCTGGTTTACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTT 421 Query 182651 CAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAA 182710 |||||| || | ||||| |||| || ||||| |||| |||||||| ||| | | || Sbjct 420 CAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAA 361 Query 182711 CCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGA 182770 ||| ||| |||||||||||||||||||| || ||||| || || |||||||| ||||| Sbjct 360 CCGCGCTAACCTTGGTATGGAAGTTATGCACGAACGTAATGCTCATAACTTCCCTCTAGA 301 Query 182771 TCTTGCTGCTGCTGA 182785 | ||||||| ||| Sbjct 300 CTTAGCTGCTGTTGA 286 Score = 571 bits (632), Expect = 7e-158 Identities = 734/1009 (73%), Gaps = 4/1009 (0%) Strand=Plus/Plus Query 183193 GATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTT 183252 ||||||||| | | || || || || ||||| || ||||| || || | || || Sbjct 33151 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGTCTATTGCTCTTT 33210 Query 183253 CCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 183312 || ||| ||| | || | || || ||| | || || ||| | ||||| || ||| Sbjct 33211 CCTTGTGCCTATTTCGCTGTAGGAGGCTGGTTCACAGGTACAACCTTTGTAACTTCATGG 33270 Query 183313 TATACCCATGGACTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTCTT-ACGGCAGCTG 183370 |||||||||||| | || ||||||| | ||||| ||| | |||||| || || || | Sbjct 33271 TATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGC--AATTTCTTAACTGCCGCAG 33328 Query 183371 TCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTC 183430 | || || |||||| | | | | |||||| | ||||||| ||||||||||| | | Sbjct 33329 TTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTGTGGGGTCCTGAAGCAC 33388 Query 183431 AAGGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACG 183490 ||||||| ||| || ||||| ||| | || || || |||| |||||| || ||||| | Sbjct 33389 AAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCCCTCCATG 33448 Query 183491 GTGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTA 183550 |||| || | || || || |||||| | || || || ||||||||||| | || Sbjct 33449 GTGCTTTCGGACTAATAGGCTTCATGTTACGTCAATTCGAACTTGCTCGATCTGTTCAAT 33508 Query 183551 TCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCC 183610 | || ||||| ||||| || ||||| |||||||| |||||||||||||| |||||||| Sbjct 33509 TGCGACCTTATAATGCAATCGCGTTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCC 33568 Query 183611 TTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAA 183670 | || |||||||| || || ||| ||||||||||| || ||||| || |||||||| | Sbjct 33569 TGATTTATCCACTAGGACAATCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCAGCTA 33628 Query 183671 TCTTTAGATTCCTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCATA 183730 | ||| ||||| | | || |||| || || || || ||||| |||||||| || |||| Sbjct 33629 TATTTCGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACATTAAACCCATTTCATA 33688 Query 183731 TGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACAG 183790 ||||||||||||| || || | || | || | || | ||||| ||||||| || | Sbjct 33689 TGATGGGAGTTGCAGGGGTATTGGGCGCTGCTTTGCTATGCGCTATTCATGGTGCTACTG 33748 Query 183791 TAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCCA 183850 |||| ||||| || | ||||||||| || ||||| |||||| || ||| | | | Sbjct 33749 TAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAA 33808 Query 183851 CTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTCG 183910 |||||| ||||| || ||||| ||||| || ||||| || || ||||| |||||||| | Sbjct 33809 CTCAAGCTGAAGAAACTTATTCAATGGTCACCGCGAACCGCTTTTGGTCCCAAATCTTTG 33868 Query 183911 GGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGG 183970 ||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || | | Sbjct 33869 GGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTG 33928 Query 183971 GTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGATT 184030 || | ||| | | || |||| | |||| || || || || || || || ||||| | Sbjct 33929 GTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTGCGCGCCTATGACT 33988 Query 184031 TTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAGA 184090 | || ||| || || | || ||||||||||| ||||||||||| ||||||||||| | Sbjct 33989 TCGTTTCTCAGGAAATTCGCGCGGCAGAAGATCCTGAATTTGAGACTTTCTACACAAAAA 34048 Query 184091 ACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAGA 184150 | || || | || ||||| | ||||| ||| | || || ||||| || ||||| | Sbjct 34049 ATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAA 34108 Query 184151 ATTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199 | ||||||| || |||||||| |||| | || || ||||||| ||| Sbjct 34109 ACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAATG 34157 >seq6 Length=36610139 Score = 439 bits (486), Expect = 3e-118 Identities = 460/603 (76%), Gaps = 1/603 (0%) Strand=Plus/Plus Query 182133 GAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCT 182192 ||| |||| ||| || ||| |||||||||| || ||||| ||| ||||| || ||| Sbjct 34152490 GAGAGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCT 34152549 Query 182193 CCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCCTTTCGGTCAAGGTTCGTTCTCC 182252 || || || || || ||||||| ||||| |||| || |||||||||| || || Sbjct 34152550 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCT 34152609 Query 182253 GATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTATATGTTGGTTTTCCAAGCTGAG 182312 |||| ||||| || |||||||| || || ||||||| ||| | || ||||| |||||| Sbjct 34152610 GATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAG 34152669 Query 182313 CACAACATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGGTGTATTCGGTGGTTCA 182372 |||||||| |||||||| || || |||||||| || ||||| ||||||||||| ||||| Sbjct 34152670 CACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCC 34152729 Query 182373 CTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAG 182432 || |||||||| ||||| ||||||||||| || ||| | || | || || || || Sbjct 34152730 CTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAA 34152789 Query 182433 CAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTT 182492 | || || || | ||||||| |||||| ||||||||||| || ||||| ||||| Sbjct 34152790 AATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTA 34152849 Query 182493 GCAGCCCATGGCTACTTCGGT-CGTTTGATCTTCCAATACGCATCATTCAACAACTCCCG 182551 || || ||||| || || ||| || || ||||||||||| || ||||||||||| || Sbjct 34152850 GCCGCTCATGGTTATTTTGGTCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCG 34152909 Query 182552 TTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTGGTTCACCGCACTTGG 182611 ||| || ||||||||||| ||||| |||||||| || || |||||||| || || | || Sbjct 34152910 TTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGG 34152969 Query 182612 TGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGG 182671 | || ||| ||||| |||||||| || |||||||| |||||||| || | ||||| | Sbjct 34152970 TATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAG 34153029 Query 182672 TCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGA 182731 ||| || ||||| |||| |||||||| ||| | | ||||| ||| ||||||||||| Sbjct 34153030 TCAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGA 34153089 Query 182732 AGT 182734 || Sbjct 34153090 GGT 34153092 >seq8 Length=31745509 Score = 360 bits (398), Expect = 2e-94 Identities = 358/464 (77%), Gaps = 0/464 (0%) Strand=Plus/Plus Query 182121 TACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTGGATCTGTGTA 182180 |||||||| ||||||||||| ||| || ||| |||||||||| || ||||| ||| Sbjct 5168713 TACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTT 5168772 Query 182181 GCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCCTTTCGGTCAA 182240 ||||| || ||||| || || || || ||||||| ||||| |||| || |||||||| Sbjct 5168773 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAA 5168832 Query 182241 GGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTATATGTTGGTT 182300 || || || |||| ||||| || |||||||| || || ||||||| ||| | || Sbjct 5168833 GGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTA 5168892 Query 182301 TTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGGTGTA 182360 ||||| |||||||||||||| |||||||| || || |||||||| || ||||| |||||| Sbjct 5168893 TTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTA 5168952 Query 182361 TTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGT 182420 ||||| ||||| || |||||||| ||||| ||||||||||| || ||| | || | Sbjct 5168953 TTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGG 5169012 Query 182421 GAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 182480 || || || || | || || || | ||||||| |||||| ||||||||||| || Sbjct 5169013 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACT 5169072 Query 182481 TATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCATCATTC 182540 ||||| ||||| || || ||||| || || || || || ||||||||||| || ||| Sbjct 5169073 TATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTC 5169132 Query 182541 AACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGT 182584 |||||||| ||||| || ||||||||||| ||||| |||||||| Sbjct 5169133 AACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGT 5169176 Score = 100 bits (110), Expect = 3e-16 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 181815 ACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCG 181874 ||| | || ||||| || | || ||||||||||| |||||||||| ||| | ||| | Sbjct 2878706 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 2878765 Query 181875 GCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTAT 181933 |||| | ||||| || || | || ||| | || || ||||| || ||||| || ||||| Sbjct 2878766 GCAA-CTTCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTAT 2878824 Query 181934 CCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGC 181987 || ||||| || |||| || || | ||||| ||||| || || || ||||| Sbjct 2878825 TCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGC 2878878 >seq4 Length=35924511 Score = 168 bits (186), Expect = 8e-37 Identities = 186/248 (75%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 182538 TTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTGG 182597 ||||||||||| ||||| || ||||||||||| ||||| |||||||| | | |||||| Sbjct 4757228 TTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAATAAGTATCTGG 4757287 Query 182598 TTCACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCAG 182657 || || || | ||| || ||| ||| | |||||||| || | |||||| |||||||| Sbjct 4757288 TTTACTGCTTTAGGTATCAGCACTATGACTTTCAACCTAAATGATTTCAATTTCAACCAA 4757347 Query 182658 TCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGCT 182717 || | ||||| |||| | |||| |||| ||||| || ||| | | ||||| ||| Sbjct 4757348 TCTGTAGTTGATAGTCAAGCCTGTGTAATTAATACTTGAGCTGATATCATTAACCGCGCT 4757407 Query 182718 GGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGATCTTGCT 182777 |||||||| |||||||||| || | ||| || || |||||| | ||||| | ||| Sbjct 4757408 AATCTTGGTAAAGAAGTTATGCTCGAACATAATGCTCATAACTTCTCTCTAGACTTAGCT 4757467 Query 182778 GCTGCTGA 182785 |||| ||| Sbjct 4757468 GCTGTTGA 4757475 >seq36 Length=917149 Score = 140 bits (154), Expect = 4e-28 Identities = 192/266 (72%), Gaps = 2/266 (1%) Strand=Plus/Minus Query 181815 ACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCG 181874 ||| | || ||||| || | || ||||||||||| |||||||||| ||| | ||| | Sbjct 329976 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 329917 Query 181875 GCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTAT 181933 ||||| ||||| || || | || ||| | || ||||| || ||||| || ||||| Sbjct 329916 GCAACT-TCTGTATTTATTATCGCCTTCATTGCCATTCCTCCAGTAGATATTGATGGTAT 329858 Query 181934 CCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGT 181993 || ||||| || | || || || | ||||| ||||| || || || ||||| || | Sbjct 329857 TCGTGAACCTGTTTCAGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGCCATTAT 329798 Query 181994 CCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGA 182053 || | || || || ||| | ||||| || |||||||||||||| || || |||| Sbjct 329797 TCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAATCTGGGAAGCGGCTTCTGTTGA 329738 Query 182054 TGAGTGGCTGTATAACGGTGGTCCTT 182079 ||| ||| | || ||||||||||||| Sbjct 329737 TGAATGGTTATACAACGGTGGTCCTT 329712 >seq4826 Length=244980 Score = 122 bits (134), Expect = 1e-22 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 183998 TTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTAAGTCAAGAGATCAGAGCAGCAG 184057 |||| || || || || || || || ||||| || || ||| || || | || |||| Sbjct 499 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 440 Query 184058 AAGATCCAGAATTTGAGACGTTCTACACAAAGAACATACTTCTTAATGAAGGACTACGTG 184117 ||||||| ||||||||||| ||||||||||| || || || | || ||||| | |||| Sbjct 439 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 380 Query 184118 CATGGTTAGCACCTTCTGATCAACCACATGAGAATTTTATATTTCCAGAGGAGGTATTAC 184177 | ||| | || || ||||| || ||||| || ||||||| || |||||||| ||| Sbjct 379 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTAC 320 Query 184178 CTAGAGGCAATGCTCTTTGATG 184199 | | || || ||||||| ||| Sbjct 319 CCCGTGGAAACGCTCTTTAATG 298 >seq1 Length=51465339 Score = 122 bits (134), Expect = 1e-22 Identities = 227/336 (68%), Gaps = 33/336 (10%) Strand=Plus/Plus Query 182451 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTC 182510 ||||||| |||||| ||||||||||| | | ||| ||||| | | ||||| || | Sbjct 27733156 GGTTACAGGTTCGGGCAAGAAGAAGAAGCTTGTAATATCGTACCCACTCATGGTTATATT 27733215 Query 182511 GGTCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 182570 ||||| || || ||||||| || ||||||||||| | ||| || ||||||||||| Sbjct 27733216 GGTCGATTAATATTCCAATCTGCTAGTTTCAACAACTCTCATTCTTTACACTTCTTCCT- 27733274 Query 182571 GCTGCATGGCCTGTTGTTGGAATCTGGTTCAC-CGCACTTGGTGTCTCCACGATGGCATT 182629 ||||| |||||||| || || ||| || ||| ||||| || Sbjct 27733275 -----------AGTTGT----ATCTGGTTTACTAGCTTAAGGTATCAGCACTATGGCTTT 27733319 Query 182630 CAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAA 182689 ||| || || ||||||| |||||||| || | ||||| |||| | |||| |||| Sbjct 27733320 CAATCTAAATGGTTTCAGTTTCAACCAATCTGTAGTTGATAGTCAAGACTGTGTAATTAA 27733379 Query 182690 CACTTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAA 182749 |||||||| ||| | ||||||||| ||||||| || |||| Sbjct 27733380 TACTTGGGCTGATATCGATAACCGTGCTAAGCTTGGTA--------AT--------GTAA 27733423 Query 182750 CGCACACAACTTCCCACTAGATCTTGCTGCTGCTGA 182785 || || |||||||| ||||| | ||||||| ||| Sbjct 27733424 TGCTCATAACTTCCCTCTAGACTTAGCTGCTGTTGA 27733459 >seq1731 Length=31681 Score = 116 bits (128), Expect = 5e-21 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 183998 TTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTAAGTCAAGAGATCAGAGCAGCAG 184057 |||| || || || || || || || ||||| || || ||| || || | || |||| Sbjct 4297 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 4238 Query 184058 AAGATCCAGAATTTGAGACGTTCTACACAAAGAACATACTTCTTAATGAAGGACTACGTG 184117 ||||||| ||||||||||| ||||||||||| || || || | || ||||| | |||| Sbjct 4237 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 4178 Query 184118 CATGGTTAGCACCTTCTGATCAACCACATGAGAATTTTATATTTCCAGAGGAGGTATTAC 184177 | ||| | || || ||||| || ||||| | ||||||| || |||||||| ||| Sbjct 4177 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAACCCTTATATTCCCTGAGGAGGTTCTAC 4118 Query 184178 CTAGAGGCAATGCTCTTTGATG 184199 | | || || ||||||| ||| Sbjct 4117 CCCGTGGAAACGCTCTTTAATG 4096 >seq3 Length=50312079 Score = 104 bits (114), Expect = 3e-17 Identities = 145/202 (72%), Gaps = 1/202 (0%) Strand=Plus/Minus Query 183998 TTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTAAGTCAAGAGATCAGAGCAGCAG 184057 |||| || || || || || || || ||||| || || |||||| || | || |||| Sbjct 24072548 TTGGTCTAGCCCTGAACCTCCGCGCCTATGACTTCGTTCCTCAAGAAATTCGCGCGGCAG 24072489 Query 184058 AAGATCCAGAATTTGAGACGTTCTACACAAAGAACATACTTCTTAATGAAGGACTACGTG 184117 ||||||| |||||||||| || ||||||| || || || | || ||||| | |||| Sbjct 24072488 AAGATCCTGAATTTGAGATTTTTGACACAAA-AATATTCTCTTAAACGAAGGTATTCGTG 24072430 Query 184118 CATGGTTAGCACCTTCTGATCAACCACATGAGAATTTTATATTTCCAGAGGAGGTATTAC 184177 | ||| | || || ||||| || ||||| || ||||||| || |||| ||| ||| Sbjct 24072429 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGGGGTTCTAC 24072370 Query 184178 CTAGAGGCAATGCTCTTTGATG 184199 | | || || ||||||| ||| Sbjct 24072369 CCCGTGGAAACGCTCTTTAATG 24072348 Score = 98.7 bits (108), Expect = 1e-15 Identities = 145/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 183998 TTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTAAGTCAAGAGATCAGAGCAGCAG 184057 |||| || || || || | || || ||||| || || ||| | || | || |||| Sbjct 34945760 TTGGTCTAGCCCTGAACCCGCGCGCCTATGACTTCGTTTCTCAGAAAATTCGCGCGGCAG 34945819 Query 184058 AAGATCCAGAATTTGAGACGTTCTACACAAAGAACATACTTCTTAATGAAGGACTACGTG 184117 ||||||| ||||||||||| ||||||||||| || || || | || ||||| | |||| Sbjct 34945820 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 34945879 Query 184118 CATGGTTAGCACCTTCTGATCAACCACATGAGAATTTTATATTTCCAGAGGAGGTAT-TA 184176 | ||| | || || ||||| | ||||| | ||||||| || ||||| |||| || Sbjct 34945880 CTTGGATGGCGGCTCAAGATCAGACTCATGAAAGACTTATATTCCCTGAGGA-GTATCTA 34945938 Query 184177 CCTAGAGGCAATGCTCTTTGATG 184199 || | || || ||||||| ||| Sbjct 34945939 CCCCGTGGAAACGCTCTTTAATG 34945961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611659099438800