Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 3e-11 >seq1 Length=51465339 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 126594 ATACCAGAAATTGGAGACAAATTTTGTTCT-GGAATGGCCCAAAAAGGAACTTGTGGTAT 126652 ||||| |||||||||| |||||| | | || |||| | | |||||||| ||| || Sbjct 44497862 ATACCTCAAATTGGAGATAAATTTAGCAGTAGGCATGGTC-AGAAAGGAACAGTTGGCAT 44497920 Query 126653 GATTTATGCACAAGAAGATATGCCGTTTACACAATCAGGTATGACCCCCGATATTATAAT 126712 || ||| |||||||||||||||| | || | |||||| ||||| |||||||| | Sbjct 44497921 GACTTACACACAAGAAGATATGCCTTGGACTGTAGAAGGTATTACCCCAGATATTATTGT 44497980 Query 126713 TAATCCAAATTGTATACCGTCAAGAATGACCAT 126745 |||||| || || ||||| | ||||| || Sbjct 44497981 GAATCCACATGCCATTCCGTCTCGGATGACAAT 44498013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658363481826960