Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq6 113 3e-20 seq2 102 6e-17 seq3 100 2e-16 seq1 91.5 1e-13 >seq6 Length=36610139 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | |||||| || || || ||||| ||||||||||| |||| Sbjct 34407670 CCACCTCTAAGACGGAGCACCAAGTGGAGGGTAGATTCTTTCTGAATATTGTAGTCAGCA 34407611 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | ||| | || || | ||||||||| ||||| ||||| | ||| || || | || Sbjct 34407610 AGGGTACGACCATCCTCAAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGG 34407551 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||| || || || ||| ||| || ||| | | | | ||||| ||||||| Sbjct 34407550 ATGCCTTCTTTATCCTGAATTTTTGCCTTCACATTATCAATTGTGTCTGAGCTCTCCACC 34407491 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| || ||||| ||||| || || |||||||||||||| Sbjct 34407490 TCCAAAGTAATTGTCTTTCCTGTCAATGTCTTCACAAAAATCTGCAT 34407444 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||| | ||| || || |||||||||||||||||| || | || | || Sbjct 34079799 AGACGGAGCACAAGATGGAGGGTAGACTCTTTTTGAATATTGTAGTCTGCAAGTGTGCGG 34079740 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | || || || |||||||| || | ||| || || | || | |||||| Sbjct 34079739 CCATCTTCAAGTTGTTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCCTCT 34079680 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||||| ||| ||| | | | || || || ||||||||| | ||| Sbjct 34079679 TTGTCTTGAATCTTTGCTTTGACATTATCAATAGTGTCGGAGCTCTCCACCTCTAGCGTG 34079620 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| |||||||| || |||||||||||||| Sbjct 34079619 ATGGTCTTTCCTGTCAAAGTCTTCACAAAAATCTGCAT 34079582 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||| | ||| || || |||||||||||||||||| || | || | || Sbjct 34642247 AGACGGAGCACAAGATGAAGGGTAGACTCTTTTTGAATATTGTAGTCTGCAAGTGTGCGG 34642188 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | || || || |||||||| || | ||| || || | || | ||||||| Sbjct 34642187 CCATCTTCAAGTTGTTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCCTCC 34642128 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||||| ||| ||| | | | || || || ||||||||| | ||| Sbjct 34642127 TTGTCTTGAATCTTTGCTTTGACATTATCAATAGTGTCAGAGCTCTCCACCTCTAGCGTG 34642068 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| |||||||| || ||||| |||||||| Sbjct 34642067 ATGGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCAT 34642030 Score = 105 bits (116), Expect = 5e-18 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG-- 48597 || ||||| |||| ||| |||||||| || ||| || |||||||| |||||||| | Sbjct 34642028 CCACCCCTCAGCCTCAATACCAAATGAAGTGTGGATTCCTTTTGAATGTTGTAATCTGCC 34641969 Query 48598 -ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTG 48656 || |||| |||| ||||||||||| || |||||||||| | ||| ||||| | Sbjct 34641968 AATGTCCTTC---CGTCCTCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGATCTGGA 34641912 Query 48657 GGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCC 48716 |||| ||||| ||||| |||||| || ||| | | | || || ||| Sbjct 34641911 GGAATTCCCTCTTTGTCTTGGATCTTTGCCTTAACATTGTCAATTGTATCAGAGCTCTCT 34641852 Query 48717 ACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||||| ||||| || ||||| || | || || ||||| || ||||| Sbjct 34641851 ACCTCCAAGGTAATTGTCTTTCCAGTAAGCGTCTTGACAAAGATTTGCAT 34641802 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| |||| ||| |||||||| || ||| || || ||||| |||||||| | Sbjct 34079580 CCACCCCTCAGCCTCAATACCAAATGAAGAGTGGATTCCTTCTGAATGTTGTAATCTGCC 34079521 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | | |||| ||||||||||| || |||||||||| | ||| ||||| | ||| Sbjct 34079520 AAGGTCCTTCCGTCCTCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGATCTGGAGGA 34079461 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| |||||| || ||| | | | || || ||| || Sbjct 34079460 ATTCCCTCCTTGTCTTGGATCTTTGCCTTAACATTGTCGATCGTATCGGAGCTCTCTACT 34079401 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || ||||| || | || || ||||| || ||||| Sbjct 34079400 TCCAAGGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAGATTTGCAT 34079354 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| || | ||| || | ||||||||| || || || || || || ||||| |||| Sbjct 34641801 GCCACCACGTAGACGGAGCACCAAATGAAGGGTCGATTCCTTCTGGATGTTGTAGTCAGC 34641742 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | ||| |||| |||| |||||| || ||||| || |||| ||| || || | ||| Sbjct 34641741 AAGGGTGCGACCGTCTTCCAGCTGCTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGGGG 34641682 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | |||||||||||| ||||| ||| ||| | | | || || || || || Sbjct 34641681 GATGCCCTCCTTGTCCTGGATCTTAGCTTTAACATTATCAATAGTGTCAGAGCTTTCAAC 34641622 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || || ||||| || | || || ||||| |||||||| Sbjct 34641621 TTCTAGGGTGATGGTCTTTCCAGTAAGTGTCTTAACAAAGATCTGCAT 34641574 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| || | ||||||||| || || || || || |||||||| |||| Sbjct 34079352 CCACCACGTAGACGGAGCACCAAATGAAGGGTTGATTCCTTCTGGATATTGTAGTCAGCA 34079293 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | ||| |||| |||| |||||| || ||||| || |||| ||| || || | ||| Sbjct 34079292 AGGGTGCGACCGTCTTCCAGCTGCTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGGGGG 34079233 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| ||| ||| | | | || || || || || Sbjct 34079232 ATGCCCTCCTTGTCCTGGATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCAACT 34079173 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || || || || || | || || ||||| |||||||| Sbjct 34079172 TCTAGGGTGATTGTCTTGCCAGTAAGTGTCTTAACAAATATCTGCAT 34079126 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| || | ||| || | |||||||| || ||| || || |||||||||||||||| Sbjct 34079125 GCCACCACGTAGACGAAGAACCAAATGAAGGGTGGATTCCTTCTGAATATTGTAATCAGC 34079066 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | ||| | || || | ||| ||||| ||||| || || | ||| ||||| | || Sbjct 34079065 TAAGGTGCGACCATCCTCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGAGG 34079006 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | || |||||||| |||||| || ||| | | | ||||| || || Sbjct 34079005 GATACCTTCCTTGTCTTGAATCTTAGCCTTGACATTGTCAATGGTGTCTGAGCTTTCTAC 34078946 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||| | || || || || || || | ||| || ||||| ||||||||| Sbjct 34078945 CTCAAGAGTGATGGTCTTCCCGGTAAGAGTCTTCACAAAGATCTGCATC 34078897 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||||||| || || ||| || || || || || |||| ||| | || Sbjct 34407205 AGGCGGAGCACCAAATGAAGGGTTGACTCCTTCTGGATGTTATAGTCAGCAAGAGTACGG 34407146 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| || ||||| || || | ||| || |||| || | |||||| Sbjct 34407145 CCGTCTTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCCGGTGGGATACCCTCC 34407086 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || |||||| ||| ||| | | | || || || || || || | ||| Sbjct 34407085 TTATCCTGAATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCAACTTCTAAGGTA 34407026 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | || || |||||||||||||| Sbjct 34407025 ATAGTCTTTCCAGTAAGGGTCTTAACAAAAATCTGCAT 34406988 Score = 82.4 bits (90), Expect = 6e-11 Identities = 101/137 (74%), Gaps = 6/137 (4%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG-- 48597 || ||||| |||| || |||||||| || ||| || || |||||||||||||||| Sbjct 34407442 CCACCCCTCAGCCTCAGTACCAAATGGAGTGTGGATTCCTTCTGAATATTGTAATCAGCC 34407383 Query 48598 -ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTG 48656 || |||| ||| || ||||||||| || ||||| |||| | ||| || |||| | Sbjct 34407382 AATGTCCTTCCATCCTC---CAACTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGG 34407326 Query 48657 GGAACGCCCTCCTTGTC 48673 || | || |||||||| Sbjct 34407325 GGGATTCCTTCCTTGTC 34407309 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| |||||| || || ||||| |||| || ||| | || ||||||||| Sbjct 34642460 TGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCCAGGGTTCTTCCATCCTCCAACTGC 34642401 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || ||||| |||| ||||||||||| | || | ||||| ||||| || || Sbjct 34642400 TTTCCAGCAAAAATCAAACGCTGTTGATCTGGTGGGATTCCCTCTTTGTCCTGGATTTTC 34642341 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | | | ||||| ||| ||||||| || || || || || ||| Sbjct 34642340 GCCTTCACATTATCAATTGTATCTGAGCTCTCAACCTCCAAGGTGATGGTCTTGCCAGTC 34642281 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| || ||||| Sbjct 34642280 AATGTCTTCACAAAGATTTGCAT 34642258 >seq2 Length=43913520 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || |||||||||||||||| ||| | | |||| || | |||||| || ||||| Sbjct 39747540 TCCTTCTGAATATTGTAATCAGCCAGAGTCCTTCCGTCCTCGAGCTGCTTTCCAGCAAAG 39747481 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| || ||| || |||| ||||| ||||||||| || |||||| || ||| Sbjct 39747480 ATCAATCTCTGCTGGTCCGGGGGAATGCCCTCCTTATCCTGAATCTTGGCCTTGACATTG 39747421 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | ||||| ||| || |||| || ||||| ||||| ||||| || || || Sbjct 39747420 TCAATTGTGTCTGAGCTCTCGACTTCCAGAGTGATCGTCTTTCCGGTCAACGTCTTAACG 39747361 Query 48756 AAAATCTGCAT 48766 || |||||||| Sbjct 39747360 AAGATCTGCAT 39747350 Score = 95.1 bits (104), Expect = 9e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| ||| || || ||||| ||||| |||||||||| ||| ||| |||| || Sbjct 39747786 ACCAGATGGAGTGTTGATTCTTTCTGAATGTTGTAATCAGCTAGGGTTCTTCCGTCCTCA 39747727 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCG-TGGGAACGCCCTCCTTGTCGCT 48676 | ||||||||| ||||| || || | ||| || || | ||||| | || ||||| || Sbjct 39747726 AGCTGCTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATC-CCTTCCTTATCCTG 39747668 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 ||||| ||| ||| | | || || || ||| ||||| | ||||| || || Sbjct 39747667 GATCTTAGCTTTCACATTGTCAATAGTATCCGAGCTCTCAACCTCAAGGGTAATAGTCTT 39747608 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||| ||||| || || || |||||||||||| Sbjct 39747607 TCCTGTCAAGGTCTTGACGAAAATCTGCATC 39747577 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||| | ||| || || ||| || || || ||||| || | || | | Sbjct 39748251 AGACGCAACACAAGATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTG 39748192 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| |||||||||||||| || || |||| | |||||| || | ||||| || ||| Sbjct 39748191 CCGTCCTCCAACTGCTTACCAGCGAAGATCAACCTCTGTTGGTCTGGGGGAATTCCTTCC 39748132 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | ||||| ||| || || | ||| Sbjct 39748131 TTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTATCTGAACTCTCAACTTCAAGGGTA 39748072 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| ||||| || || |||||||||||||| Sbjct 39748071 ATAGTCTTTCCTGTCAAGGTCTTGACAAAAATCTGCAT 39748034 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || ||| ||| || || ||||| ||||||| ||| | | | Sbjct 39748707 AGACGCAAGACCAAGTGAAGGGTGGACTCCTTCTGGATATTATAATCAGCCAGAGTCCTA 39748648 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| || ||||| |||| | ||| ||||| | |||| || ||| Sbjct 39748647 CCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGAGGAATTCCTTCC 39748588 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | ||||| ||||||||| | || Sbjct 39748587 TTGTCCTGGATCTTCGCCTTAACATTGTCAATGGTATCTGAACTCTCCACCTCTAGGGTT 39748528 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || |||| ||| || || ||||||||||| Sbjct 39748527 ATAGTCTTGCCGGTCAGAGTCTTCACGAAAATCTGCAT 39748490 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| ||| || || |||||| ||||| ||||| || | ||| | | | || ||| Sbjct 39748014 ACCAGATGGAGTGTTGACTCTTTCTGAATGTTGTAGTCTGCAAGAGTCCTGCCATCCTCC 39747955 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||||| || || |||| | ||| || || | ||||| || |||||||| Sbjct 39747954 AGTTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGG 39747895 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| ||| ||| | | | || || ||| ||||||| ||||| || || Sbjct 39747894 ATCTTAGCTTTCACATTGTCAATCGTATCCGAGCTCTCAACCTCCAGGGTAATAGTCTTG 39747835 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || ||||| || || ||||||||||||||| Sbjct 39747834 CCTGTCAAGGTCTTGACAAAAATCTGCATC 39747805 >seq3 Length=50312079 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||| ||| || || ||| |||||||||||||| || | || | || Sbjct 6144169 AGACGAAGCACCAGATGAAGGGTAGACTCCTTTTGAATATTGTAGTCGGCCAGTGTGCGG 6144110 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||| || |||||||| || | ||| || || | || | ||| ||| Sbjct 6144109 CCATCCTCCAGCTGCTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCTTCC 6144050 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||||| ||| ||| | | | | ||||| ||| ||||| | || Sbjct 6144049 TTGTCCTGAATCTTTGCTTTCACATTATCAATGGTGTCTGAGCTCTCAACCTCAAGTGTG 6143990 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || |||| ||| || ||||| |||||||| Sbjct 6143989 ATAGTCTTCCCAGTCAGAGTCTTCACAAATATCTGCAT 6143952 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| || || | || ||| |||| ||| || ||| || |||||||| |||||||||| Sbjct 6143951 GCCACCTCTCAACCTCAATACCAGATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGC 6143892 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 | | | | | || ||||| |||||||| ||||| |||| | ||| || || | ||| Sbjct 6143891 CAATGTCCTACCATCCTCCAATTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGGGG 6143832 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || ||||||||||| ||| || ||| ||| | | | || || || || Sbjct 6143831 AATTCCCTCCTTGTCTTGAATTTTCGCTTTCACATTGTCAATTGTATCAGAACTTTCTAC 6143772 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | |||||||| || || || | ||| || ||||| || ||||| Sbjct 6143771 TTCAAGGGTAATCGTCTTCCCAGTGAGAGTCTTAACAAAGATTTGCAT 6143724 >seq1 Length=51465339 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||||||||| || || || ||| || || ||||||||||| | || | | Sbjct 45561690 AGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATATTGTAATCTGCAAGGGTCCTT 45561631 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||||||| ||||| |||| | ||| ||||| | |||| || ||| Sbjct 45561630 CCATCCTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGAGGAATACCTTCC 45561571 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || |||||| || ||| | | | | || || |||||| |||| || Sbjct 45561570 TTATCCTGAATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCCACTTCCAAGGTG 45561511 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| |||| ||| || ||||| |||||||| Sbjct 45561510 ATAGTCTTTCCAGTCAGAGTCTTAACAAAGATCTGCAT 45561473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380915194440798