Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq4825 691 0.0 seq6 441 8e-119 seq8 370 1e-97 seq4 172 6e-38 seq36 163 3e-35 seq4826 129 6e-25 seq1731 123 3e-23 seq1 113 5e-20 seq3 107 2e-18 >seq4825 Length=155848 Score = 691 bits (766), Expect = 0.0 Identities = 753/994 (76%), Gaps = 4/994 (0%) Strand=Plus/Minus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 || ||||||||| | ||||||||||| ||||| ||||| |||| ||||| || || || Sbjct 1277 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1218 Query 160936 ATGATTCCCTGCTTGCTCG-CTGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTC 160993 ||||| |||| ||| | | | || || | ||| || || || |||||| ||| ||||| Sbjct 1217 ATGAT-CCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTC 1160 Query 160994 CCCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 161053 | || || || || || || ||||||||||| || |||| || || | ||||| |||| Sbjct 1159 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACA 1100 Query 161054 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 161113 | || || || ||||| |||| || ||||| ||||| ||| ||||||| || || | Sbjct 1099 ATATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAA 1040 Query 161114 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 161173 |||||||||| || | | || |||||| | |||||||||||||||| || | | | Sbjct 1039 TCTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGTCCTTATGAATTAATCG 980 Query 161174 TGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACC 161233 | | ||||| | |||| | | ||||||||||||||||||||| ||| || || Sbjct 979 TTCTACACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCC 920 Query 161234 GTCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTG 161293 |||| || ||||| ||||||||| || ||||| || |||||||| || || || | || Sbjct 919 GTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 860 Query 161294 CAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCA 161353 | || ||| || |||| || |||||||||| || ||||||| |||||||| || | Sbjct 859 CTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAA 800 Query 161354 TCTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACC 161413 |||||||||| ||||||| |||| |||| ||||| || ||||||||||| || ||||||| Sbjct 799 TCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 740 Query 161414 CCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACG 161473 | || || ||| | |||||||| ||||| || |||||||| || || ||||| ||||| | Sbjct 739 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCATG 680 Query 161474 GTTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATG 161533 |||| |||| |||||| || | | |||||||| ||||| || || || | | Sbjct 679 GTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 620 Query 161534 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCG 161593 |||||| |||||| ||||||||||| || || || ||||| || || || || || || | Sbjct 619 GTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 560 Query 161594 GTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTG 161653 | || | || |||||||| ||| ||||||||||| || || | ||||||||||| | Sbjct 559 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAG 500 Query 161654 CTGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCA 161713 ||||||||||||| || || |||||||| ||||| | || | ||||| ||||| |||| Sbjct 499 CTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGGCTTTCA 440 Query 161714 ACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACA 161773 |||| ||||||||||| |||||||| ||| | ||||||||||| || || || || | Sbjct 439 ACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATA 380 Query 161774 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATG 161833 | ||||| || | | ||||| ||| ||||| |||||||| |||||||| || |||| Sbjct 379 CTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCACGAACGTAATG 320 Query 161834 CTCACAACTTCCCTCTTGACCTTGCTGCTGCTGA 161867 |||| ||||||||||| ||| | ||||||| ||| Sbjct 319 CTCATAACTTCCCTCTAGACTTAGCTGCTGTTGA 286 Score = 544 bits (602), Expect = 9e-150 Identities = 734/1016 (72%), Gaps = 6/1016 (1%) Strand=Plus/Plus Query 162117 TTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGA 162176 |||||| | | || |||||| | || ||||||||||||||||| || ||||| || Sbjct 33139 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGT 33198 Query 162177 CTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTC 162236 || | || ||||| ||| ||| | ||| | || || ||| | || || || || || Sbjct 33199 CTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGAGGCTGGTTCACAGGTACAACCTTT 33258 Query 162237 GTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTG-AGGGTGCAAACTTTCT 162295 || || |||||||| || ||| | || ||||||||| | | ||| ||||| ||||| Sbjct 33259 GTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAA--TTTCT 33316 Query 162296 T-ACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGG 162354 | ||||| |||||||||||||| || | | | | |||||| | || | || |||| Sbjct 33317 TAACTGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTGTGGG 33376 Query 162355 GTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTG 162414 ||||||| | |||||||| || | || ||||| ||| | || || || |||||||||| Sbjct 33377 GTCCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTG 33436 Query 162415 TGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCAC 162474 | || ||||| || || || | ||| ||||| |||||| | || || || ||||| || | Sbjct 33437 TTGCCCTCCATGGTGCTTTCGGACTAATAGGCTTCATGTTACGTCAATTCGAACTTGCTC 33496 Query 162475 GA-CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTC 162533 || || || | | || ||||| ||||| || || || || ||||| |||||||| || Sbjct 33497 GATCTGTTCAAT-TGCGACCTTATAATGCAATCGCGTTTTCTGGTCCAATTGCTGTTTTT 33555 Query 162534 GTTAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTC 162593 ||| ||| || || || ||||| | |||||||| |||||||| || || || Sbjct 33556 GTTTCTGTATTCCTGATTTATCCACTAGGACAATCTGGTTGGTTCTTTGCGCCAAGTTTT 33615 Query 162594 GGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTA 162653 || || ||||| || || |||||| | ||||| | ||||| || ||||| ||||| || Sbjct 33616 GGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACATTA 33675 Query 162654 AATCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATT 162713 || || ||||| |||||||| || ||||| | | || | ||| ||||| | |||||| Sbjct 33676 AACCCATTTCATATGATGGGAGTTGCAGGGGTATTGGGCGCTGCTTTGCTATGCGCTATT 33735 Query 162714 CATGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAA 162773 ||||| | || || |||||||| | | |||||||| || ||||| || || Sbjct 33736 CATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGT 33795 Query 162774 GCATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGG 162833 || ||| || | || || | |||||||| ||||| ||||| || ||||||||||| ||| Sbjct 33796 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCGAACCGCTTTTGG 33855 Query 162834 TCACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTT 162893 || || || || || |||||||| || || |||||||| |||||||||||| | ||| Sbjct 33856 TCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 33915 Query 162894 GTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTT 162953 || || || | ||| | |||| ||| || | || | |||| || || || || || Sbjct 33916 GTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTG 33975 Query 162954 CGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACG 163013 || || || ||||| || ||||| ||| |||| ||||||||||| ||||| |||||||| Sbjct 33976 CGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAGAAGATCCTGAATTTGAGACT 34035 Query 163014 TTCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGAC 163073 ||||| ||||| || ||||| | || ||||| |||| || ||| | || | || Sbjct 34036 TTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGAT 34095 Query 163074 CAACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129 || |||||||| ||| || | |||||||| ||||| | || | || |||||||| Sbjct 34096 CAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 34151 Score = 87.8 bits (96), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 157681 CCATTTTTACGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGC 157740 ||| || || ||| |||||||||||||||||||||| ||| |||||| ||| | ||| | Sbjct 66753 CCAATTGTA-GGGATGTAGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCAC 66695 Query 157741 AGGTTCGAATCCTGTCACCCCGACTTAT 157768 |||||| |||||||||| ||| || ||| Sbjct 66694 AGGTTCAAATCCTGTCATCCCTACCTAT 66667 >seq6 Length=36610139 Score = 441 bits (488), Expect = 8e-119 Identities = 461/604 (76%), Gaps = 1/604 (0%) Strand=Plus/Plus Query 161215 GAGTGGGAACTTTCTTACCGTCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCT 161274 ||| |||| ||| || |||||| || ||||| ||||||||| || ||||| || ||| Sbjct 34152490 GAGAGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCT 34152549 Query 161275 CCTGTCGCTGCAGCGAGTGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCT 161334 ||||| || || || | ||| || ||| || |||| || |||||||||| || ||| Sbjct 34152550 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCT 34152609 Query 161335 GATGCAATGCCTCTGGGCATCTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAG 161394 |||| |||||||| || ||||||||||| ||||||| |||| |||| ||||| || ||| Sbjct 34152610 GATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAG 34152669 Query 161395 CACAACATTCTCATGCACCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCT 161454 |||||||| || |||||||| || || ||| | |||||||| ||||| || |||||||| Sbjct 34152670 CACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCC 34152729 Query 161455 CTGTTCAGTGCAATGCACGGTTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAA 161514 || || ||||| ||||| ||||| |||| |||||| || | | |||||||| ||| Sbjct 34152730 CTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAA 34152789 Query 161515 AACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTT 161574 || || || || | ||||||| |||||| ||||||||||| || || || ||||| Sbjct 34152790 AATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTA 34152849 Query 161575 GCTGCCCACGGGTACTTCGGT-CGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCG 161633 || || || || || || ||| || | || |||||||| ||| ||||||||||| || Sbjct 34152850 GCCGCTCATGGTTATTTTGGTCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCG 34152909 Query 161634 CTCGCTGCACTTCTTCCTTGCTGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGG 161693 || | ||||||||||| |||||||||||||| || || |||||||| ||||| | || Sbjct 34152910 TTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGG 34152969 Query 161694 CGTAAGCACCATGGCATTCAACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAG 161753 | ||||| ||||| |||||||| ||||||||||| |||||||| ||| | |||||||| Sbjct 34152970 TATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAG 34153029 Query 161754 TCAGGGTAAAGTTATCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGA 161813 ||| || || || || || ||||| || | | ||||| ||| ||||| ||||| Sbjct 34153030 TCAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGA 34153089 Query 161814 AGTG 161817 ||| Sbjct 34153090 GGTG 34153093 Score = 87.8 bits (96), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 157681 CCATTTTTACGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGC 157740 ||| || || ||| |||||||||||||||||||||| ||| |||||| ||| | ||| | Sbjct 13643654 CCAATTGTA-GGGATGTAGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCAC 13643596 Query 157741 AGGTTCGAATCCTGTCACCCCGACTTAT 157768 |||||| |||||||||| ||| || ||| Sbjct 13643595 AGGTTCAAATCCTGTCATCCCTACCTAT 13643568 >seq8 Length=31745509 Score = 370 bits (410), Expect = 1e-97 Identities = 361/465 (78%), Gaps = 0/465 (0%) Strand=Plus/Plus Query 161202 TTACATGGGTCGTGAGTGGGAACTTTCTTACCGTCTGGGAATGCGTCCTTGGATTTGCGT 161261 ||||||||||||||||||||| ||| || |||||| || ||||| ||||||||| || Sbjct 5168712 TTACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGT 5168771 Query 161262 AGCATACTCTGCTCCTGTCGCTGCAGCGAGTGCAGTGTTCCTGGTCTATCCTTTCGGTCA 161321 ||||| || |||||||| || || || | ||| || ||| || |||| || ||||||| Sbjct 5168772 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCA 5168831 Query 161322 AGGTTCTTTCTCTGATGCAATGCCTCTGGGCATCTCTGGTACGTTCAACTACATGCTTGT 161381 ||| || ||||||| |||||||| || ||||||||||| ||||||| |||| |||| Sbjct 5168832 AGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 5168891 Query 161382 CTTCCAAGCAGAGCACAACATTCTCATGCACCCCTTCCATATGCTCGGCGTAGCAGGTGT 161441 ||||| || ||||||||||| || |||||||| || || ||| | |||||||| ||||| Sbjct 5168892 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGT 5168951 Query 161442 GTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTACCTCTTCGCTGGTTCG 161501 || |||||||| || || ||||| ||||| ||||| |||| |||||| || | | Sbjct 5168952 ATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAG 5169011 Query 161502 TGAAACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGAC 161561 |||||||| ||||| || || || | ||||||| |||||| ||||||||||| || Sbjct 5169012 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAAC 5169071 Query 161562 CTACAACATCGTTGCTGCCCACGGGTACTTCGGTCGTCTGATTTTCCAATACGCTTCCTT 161621 || || ||||| || || || || || || || || | || |||||||| ||| || Sbjct 5169072 TTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTT 5169131 Query 161622 CAACAACTCCCGCTCGCTGCACTTCTTCCTTGCTGCTTGGCCTGT 161666 ||||||||| || || | ||||||||||| |||||||||||||| Sbjct 5169132 CAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGT 5169176 Score = 138 bits (152), Expect = 1e-27 Identities = 173/232 (75%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 || ||||||||| | ||||||||||| ||||| ||||| |||| ||||| || || || Sbjct 2878685 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 2878744 Query 160936 ATGATTCCCTGCTTGCTCG-CTGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTC 160993 ||||| |||| ||| | | | || || | ||| || || || |||||| ||| ||||| Sbjct 2878745 ATGAT-CCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTC 2878802 Query 160994 CCCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 161053 | || || || || || || ||||||||||| || |||| || || | ||||| |||| Sbjct 2878803 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACA 2878862 Query 161054 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTT 161105 | || || || ||||| |||| || ||||| ||||| ||| ||||||| Sbjct 2878863 ATATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCACTT 2878914 >seq4 Length=35924511 Score = 172 bits (190), Expect = 6e-38 Identities = 187/248 (75%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 161620 TTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGCTGCTTGGCCTGTTGTTGGCATCTGG 161679 ||||||||||| || || | ||||||||||| |||||||||||||| | | |||||| Sbjct 4757228 TTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAATAAGTATCTGG 4757287 Query 161680 TTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTGAATGGTTTCAACTTCAACCAG 161739 || ||||| | || | ||||| ||| | |||||||| |||| |||||| |||||||| Sbjct 4757288 TTTACTGCTTTAGGTATCAGCACTATGACTTTCAACCTAAATGATTTCAATTTCAACCAA 4757347 Query 161740 TCTATCGTTGATAGTCAGGGTAAAGTTATCAACACCTGGGCAGACGTTCTCAACCGTGCT 161799 ||| | ||||||||||| | || || || || || || || | | ||||| ||| Sbjct 4757348 TCTGTAGTTGATAGTCAAGCCTGTGTAATTAATACTTGAGCTGATATCATTAACCGCGCT 4757407 Query 161800 GGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCTCACAACTTCCCTCTTGACCTTGCT 161859 |||||| | ||||| |||| ||| | |||||||| |||||| |||| ||| | ||| Sbjct 4757408 AATCTTGGTAAAGAAGTTATGCTCGAACATAATGCTCATAACTTCTCTCTAGACTTAGCT 4757467 Query 161860 GCTGCTGA 161867 |||| ||| Sbjct 4757468 GCTGTTGA 4757475 >seq36 Length=917149 Score = 163 bits (180), Expect = 3e-35 Identities = 212/288 (74%), Gaps = 4/288 (1%) Strand=Plus/Minus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 || ||||||| | | ||||||||||| ||||| ||||| |||| ||||| || || || Sbjct 329997 TTCTGTAACTAGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 329938 Query 160936 ATGATTCCCTGCTTGCTCG-CTGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTC 160993 ||||| |||| ||| | | | || || | ||| || || || |||||| ||| || Sbjct 329937 ATGAT-CCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCCATTC 329880 Query 160994 CCCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 161053 | || || || || || || ||||||||||| || | || || || | ||||| |||| Sbjct 329879 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCAGGATCTCTACTTTATGGCAACA 329820 Query 161054 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 161113 | || || || ||||| |||| || ||||| ||||| ||| ||||||| || || | Sbjct 329819 ATATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAA 329760 Query 161114 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTT 161161 |||||||||| || | | || |||||| | |||||||||||||||| Sbjct 329759 TCTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGTCCTT 329712 >seq4826 Length=244980 Score = 129 bits (142), Expect = 6e-25 Identities = 146/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 162934 TTGGACTCGCTCTCAATCTTCGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAG 162993 |||| || || || || || || || || ||||| || ||||| ||| |||| ||||||| Sbjct 499 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 440 Query 162994 AAGACCCTGAGTTTGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAG 163053 |||| ||||| |||||||| ||||| ||||| || ||||| | || ||||| |||| | Sbjct 439 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 380 Query 163054 CATGGTTAGCACCAGTGGACCAACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGC 163113 | ||| | || | || || |||||||| ||| || | |||||||| ||||| | | Sbjct 379 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTAC 320 Query 163114 CAAGAGGCAACGCTCT 163129 | | || |||||||| Sbjct 319 CCCGTGGAAACGCTCT 304 >seq1731 Length=31681 Score = 123 bits (136), Expect = 3e-23 Identities = 145/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 162934 TTGGACTCGCTCTCAATCTTCGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAG 162993 |||| || || || || || || || || ||||| || ||||| ||| |||| ||||||| Sbjct 4297 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 4238 Query 162994 AAGACCCTGAGTTTGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAG 163053 |||| ||||| |||||||| ||||| ||||| || ||||| | || ||||| |||| | Sbjct 4237 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 4178 Query 163054 CATGGTTAGCACCAGTGGACCAACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGC 163113 | ||| | || | || || |||||||| | | || | |||||||| ||||| | | Sbjct 4177 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAACCCTTATATTCCCTGAGGAGGTTCTAC 4118 Query 163114 CAAGAGGCAACGCTCT 163129 | | || |||||||| Sbjct 4117 CCCGTGGAAACGCTCT 4102 >seq1 Length=51465339 Score = 113 bits (124), Expect = 5e-20 Identities = 225/336 (67%), Gaps = 33/336 (10%) Strand=Plus/Plus Query 161533 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTC 161592 ||||||| |||||| ||||||||||| | | || ||||| | | || || || | Sbjct 27733156 GGTTACAGGTTCGGGCAAGAAGAAGAAGCTTGTAATATCGTACCCACTCATGGTTATATT 27733215 Query 161593 GGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTT 161652 ||||| | || ||||||| ||| ||||||||||| | || | ||||||||||| Sbjct 27733216 GGTCGATTAATATTCCAATCTGCTAGTTTCAACAACTCTCATTCTTTACACTTCTTCCTA 27733275 Query 161653 GCTGCTTGGCCTGTTGTTGGCATCTGGTTCACT-GCACTGGGCGTAAGCACCATGGCATT 161711 | |||| |||||||| ||| || || | ||||| ||||| || Sbjct 27733276 G------------TTGT----ATCTGGTTTACTAGCTTAAGGTATCAGCACTATGGCTTT 27733319 Query 161712 CAACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAA 161771 ||| || |||||||||| |||||||| ||| | ||||||||||| | || || || Sbjct 27733320 CAATCTAAATGGTTTCAGTTTCAACCAATCTGTAGTTGATAGTCAAGACTGTGTAATTAA 27733379 Query 161772 CACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAA 161831 || ||||| || | ||||||||| |||| || || | || Sbjct 27733380 TACTTGGGCTGATATCGATAACCGTGCTAAGCTTG--------GTAAT--------GTAA 27733423 Query 161832 TGCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGA 161867 |||||| ||||||||||| ||| | ||||||| ||| Sbjct 27733424 TGCTCATAACTTCCCTCTAGACTTAGCTGCTGTTGA 27733459 >seq3 Length=50312079 Score = 107 bits (118), Expect = 2e-18 Identities = 142/196 (72%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 162934 TTGGACTCGCTCTCAATCTTCGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAG 162993 |||| || || || || || || || || ||||| || |||||||| |||| ||||||| Sbjct 24072548 TTGGTCTAGCCCTGAACCTCCGCGCCTATGACTTCGTTCCTCAAGAAATTCGCGCGGCAG 24072489 Query 162994 AAGACCCTGAGTTTGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAG 163053 |||| ||||| ||||||| || | ||||| || ||||| | || ||||| |||| | Sbjct 24072488 AAGATCCTGAATTTGAGATTTTTGACACAAA-AATATTCTCTTAAACGAAGGTATTCGTG 24072430 Query 163054 CATGGTTAGCACCAGTGGACCAACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGC 163113 | ||| | || | || || |||||||| ||| || | |||||||| | ||| | | Sbjct 24072429 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGGGGTTCTAC 24072370 Query 163114 CAAGAGGCAACGCTCT 163129 | | || |||||||| Sbjct 24072369 CCCGTGGAAACGCTCT 24072354 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 162934 TTGGACTCGCTCTCAATCTTCGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAG 162993 |||| || || || || | || || || ||||| || ||||| || |||| ||||||| Sbjct 34945760 TTGGTCTAGCCCTGAACCCGCGCGCCTATGACTTCGTTTCTCAGAAAATTCGCGCGGCAG 34945819 Query 162994 AAGACCCTGAGTTTGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAG 163053 |||| ||||| |||||||| ||||| ||||| || ||||| | || ||||| |||| | Sbjct 34945820 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 34945879 Query 163054 CATGGTTAGCACCAGTGGACCAACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGC 163113 | ||| | || | || || ||||||| | || | |||||||| ||| | | Sbjct 34945880 CTTGGATGGCGGCTCAAGATCAGACTCATGAAAGACTTATATTCCCTGAGGAGTATCTAC 34945939 Query 163114 CAAGAGGCAACGCTCT 163129 | | || |||||||| Sbjct 34945940 CCCGTGGAAACGCTCT 34945955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547714157150160