Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq4825 529 2e-145 seq6 351 1e-91 seq8 282 5e-71 seq36 131 2e-25 seq4826 111 2e-19 seq4 107 2e-18 seq1731 105 8e-18 seq1 104 3e-17 seq3 87.8 2e-12 >seq4825 Length=155848 Score = 529 bits (586), Expect = 2e-145 Identities = 717/994 (72%), Gaps = 4/994 (0%) Strand=Plus/Plus Query 124040 TCAGCAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATA 124099 ||| ||| |||| |||||| |||||||| || ||||| | ||| ||||||||||||||| Sbjct 286 TCAACAGCAGCTAAGTCTAGAGGGAAGTTATGAGCATTACGTTCGTGCATAACTTCCATA 345 Query 124100 CCCAAGTTTGCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCA 124159 || | ||| || | ||| | | |||| |||| || | | || | | |||| Sbjct 346 CCAAGGTTAGCGCGGTTAATGATATCAGCCCAAGTATTAATTACACGGCCTTGACTATCA 405 Query 124160 ACAACTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATA 124219 || || |||||||| || ||||||||||| | |||||| ||||| |||| |||||| | | Sbjct 406 ACTACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCTAAA 465 Query 124220 GAGGTTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAG 124279 | || ||||| | || ||| ||||| || | |||||||||||||| | | | ||| Sbjct 466 GCAGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAG 525 Query 124280 TTGTTGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATG 124339 |||||||| |||||| |||||||| | || ||||| ||||| || || ||||| || Sbjct 526 TTGTTGAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCTACGATA 585 Query 124340 TTGTATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTT 124399 || || |||||||||||||| |||||| | ||||| | || || || | ||||| Sbjct 586 TTATAAGTTTCTTCTTCTTGCCCGAACCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 645 Query 124400 GTTTCTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCT 124459 ||||| ||||| | | ||| || || | |||||||||||| || |||| || || Sbjct 646 GTTTCCCTGATCAAACTAGAGGTTACCAAAGAACCATGCATAGCACTAAATAGGGAACCG 705 Query 124460 CCGAACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCT 124519 ||||| | || ||||| ||| |||||| || || ||||| || ||||| ||||| || Sbjct 706 CCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCC 765 Query 124520 TGGAAAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAAT 124579 ||||| || | ||| |||||||||||||| ||||| || || |||||||||||||| || Sbjct 766 TGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAG 825 Query 124580 GAACCCTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAA 124639 || ||||| | |||||| | ||||| ||||| ||||| | || || |||||| Sbjct 826 CTTCCTTGACCGATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAA 885 Query 124640 TAAGCAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCC 124699 || |||||| |||||||| ||||| |||| | | | || ||||||| | ||| Sbjct 886 TATGCAACAGCAATCCAAGGTCGCATACCTAGACGGAAACTAAGCTCCCACTCACGACCC 945 Query 124700 ATGTATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTA 124759 ||||| | | ||||| | ||||| | || | || | |||||||||||| || Sbjct 946 ATGTAACAAGCTACACCAAGTAAAAAGTGTAGAACGATTAATTCATAAGGACCACCGTTG 1005 Query 124760 TACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCG 124819 || |||||||||||||||| || |||||||||||||| || ||||| | || ||||| Sbjct 1006 TATAACCATTCATCAACAGAAGCCGCTTCCCAGATTGGATAAAAGTGCAAACCTATAGCT 1065 Query 124820 TTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCT 124879 || | |||| || ||||| || || || ||||| ||||| | | ||| || | Sbjct 1066 GCAGAAGTCGGAATAATGGCACCGGAAATAATATTGTTGCCATAAAGTAGAGATCCAGAA 1125 Query 124880 ACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA- 124938 || ||||| | || || || ||||| || ||||| || ||||| || || | || || Sbjct 1126 ACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAAT 1185 Query 124939 ACATGCTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAAT 124998 ||| | | ||| || | ||| || ||||| | |||||||||||| |||| |||| Sbjct 1186 ACA-GAAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAG 1244 Query 124999 TCTGTTGTTTGTTGAT-GTTACCCACTCACAGAA 125031 | ||| || | || | |||| ||| | |||||| Sbjct 1245 ACGGTT-TTCGGTGCTGGTTATCCAGTTACAGAA 1277 Score = 381 bits (422), Expect = 7e-101 Identities = 707/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | |||| || || || ||||||| || || ||||| || || Sbjct 34155 TTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 34096 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || ||||| || | ||||| || || || ||||| Sbjct 34095 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTTGTGTAGAA 34036 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || |||||||| || | || || ||||| || ||||| || || | Sbjct 34035 AGTCTCAAATTCAGGATCTTCTGCCGCGCGAATTTCCTGAGAAACGAAGTCATAGGCGCG 33976 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| || || ||||| || | || | || |||| | ||| | || || || Sbjct 33975 CAGGTTCAGGGCCAGACCAACTACTCCAAGAGCACTCATCCATAAACCAGTTACTGGTAC 33916 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | ||| || ||||| || | ||||| || || || Sbjct 33915 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGGA 33856 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | |||||| || | ||| |||||||||||| | || || || | || || Sbjct 33855 CCAAAAGCGGTTCGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGC 33796 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| |||| ||| | || ||| || ||||| | || || Sbjct 33795 ACGGAA---TGTAT-TTGCA-----CCATCACCAT------------CTTCAAATAAAGT 33757 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || ||||||||||| || ||||| || || | || | || |||||||| Sbjct 33756 ATTTTCTACAGTAGCACCATGAATAGCGCATAGCAAAGCAGCGCCCAATACCCCTGCAAC 33697 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| |||||||| || ||||| || || || ||||| | || | ||| | Sbjct 33696 TCCCATCATATGAAATGGGTTTAATGTCCAATTATGAAATCCTTGAAAAAAGAGGATGAA 33637 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || ||||| ||||| || ||| || |||||||||| || |||||||| Sbjct 33636 TCGAAATATAGCTGCTACACCAAAACTTGGCGCAAAGAACCAACCAGATTGTCCTAGTGG 33577 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| ||||| || | | || || || || | |||| || |||| ||| || || Sbjct 33576 ATAAATCAGGAATACAGAAACAAAAACAGCAATTGGACCAGAAAACGCGATTGCATTATA 33517 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 ||||| | ||| || || | || ||||| | | |||||| ||||| ||||| Sbjct 33516 AGGTCGCAATTGAACAGATCGAGCAAGTTCGAATTGACGTAACATGAAGCCTATTAGTCC 33457 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 || | ||||| | || ||||| |||| ||||| || | ||| |||||||| || Sbjct 33456 GAAAGCACCATGGAGGGCAACAAAAGTCCACAGACCACCTAATTGACACCAACGAGTAAA 33397 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705 |||||||||||||| ||||| || |||| | | ||| | | | | |||| Sbjct 33396 ATCCCCTTGTGCTTCAGGACCCCACAGTAACAACAAAGAATGTGCTAAACTATTAGCAGG 33337 Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765 || || ||||| || |||||||| || || || | ||| ||| || | ||||| Sbjct 33336 AGTAGAAACTGCGGCAGTTAAGAAATTGCAGCCTTCCAAATAGGAACTGGCCAATCCATG 33277 Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825 ||||||||||| || || ||||| || ||| |||||| || || | | | ||| || Sbjct 33276 GGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAGCCTCCTACAGCGAAATAGGC 33217 Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885 |||||| | || || ||||| |||||||||| || || ||||| || ||| |||||| Sbjct 33216 ACAAGGAAAGAGCAATAGACCGGACCATCCTACAAAAACGAAACGGTCCCTCCGTAACCA 33157 Query 123886 GTCGTCAAGAACATCAAA 123903 ||| || | || |||||| Sbjct 33156 GTCATCCATAATATCAAA 33139 >seq6 Length=36610139 Score = 351 bits (388), Expect = 1e-91 Identities = 388/516 (75%), Gaps = 1/516 (0%) Strand=Plus/Minus Query 124156 ATCAACAACTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACC 124215 |||||| || |||||||| || ||||||||||| | |||||| ||||| |||| |||||| Sbjct 34153027 ATCAACTACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACC 34152968 Query 124216 CATAGAGGTTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCT 124275 | || || ||||| | || ||| ||||| || | |||||||||||||| | | | Sbjct 34152967 TAAAGCAGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACG 34152908 Query 124276 TGAGTTGTTGAATGAAGCATACTGGAAGATAAGACG-ACCAAAGTAACCGTGTGCTGCTA 124334 ||||||||||| |||||| |||||||| | || |||||| ||||| || || |||| Sbjct 34152907 AGAGTTGTTGAAACTAGCATATTGGAAGATTAATCGGACCAAAATAACCATGAGCGGCTA 34152848 Query 124335 CTATGTTGTATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCT 124394 | || || || |||||||||||||| |||||| | ||||| | || || || | | Sbjct 34152847 CGATATTATAAGTTTCTTCTTCTTGCCCGAACCTGTAACCTTCATTAGCAGATTCATTTT 34152788 Query 124395 CTGTTGTTTCTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAG 124454 |||| ||||| ||||| | | ||| || || | |||||||||||| || |||| | Sbjct 34152787 CTGTGGTTTCCCTGATCAAACTAGAGGTTACCAAAGAACCATGCATAGCACTAAATAGGG 34152728 Query 124455 ATCCTCCGAACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCT 124514 | || ||||| | || ||||| ||| |||||| || || ||||| || ||||| |||| Sbjct 34152727 AACCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCT 34152668 Query 124515 CTGCTTGGAAAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAG 124574 | || ||||| || | ||| |||||||||||||| ||||| || || ||||||||||||| Sbjct 34152667 CAGCCTGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAG 34152608 Query 124575 AGAATGAACCCTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTG 124634 | || || ||||| | |||||| | ||||| ||||| ||||| | || || | Sbjct 34152607 AAAAGCTTCCTTGACCGATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAG 34152548 Query 124635 CTGAATAAGCAACACAGATCCAAGGACGCATTCCTA 124670 ||||||| |||||| |||||||| ||||| |||| Sbjct 34152547 CTGAATATGCAACAGCAATCCAAGGTCGCATACCTA 34152512 >seq8 Length=31745509 Score = 282 bits (312), Expect = 5e-71 Identities = 341/464 (73%), Gaps = 0/464 (0%) Strand=Plus/Minus Query 124241 ACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAATGAAGCATACTGG 124300 ||||| || | |||||||||||||| | | | ||||||||||| |||||| ||| Sbjct 5169176 ACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGG 5169117 Query 124301 AAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTTTCTTCTTCTTGT 124360 ||||| | || ||||| ||||| || || ||||| || || || |||||||||||||| Sbjct 5169116 AAGATTAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAAGTTTCTTCTTCTTGC 5169057 Query 124361 CCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTGATTAGAGAAGAT 124420 |||||| | ||||| | || || || | ||||| ||||| ||||| | | ||| Sbjct 5169056 CCGAACCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAG 5168997 Query 124421 GTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATTCCTGCTACTCCT 124480 || || | |||||||||||| || |||| || || ||||| | || ||||| ||| Sbjct 5168996 GTTACCAAAGAACCATGCATAGCACTAAATAGGGAACCGCCGAATACACCAGCTACGCCT 5168937 Query 124481 GCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACGAACATAAAGTTG 124540 |||||| || || ||||| || ||||| ||||| || ||||| || | ||| |||||| Sbjct 5168936 AACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAAGTTG 5168877 Query 124541 AAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGACCAAATGGGTAT 124600 |||||||| ||||| || || |||||||||||||| || || ||||| | |||||| Sbjct 5168876 AAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAGCTTCCTTGACCGATTGGGTAG 5168817 Query 124601 ACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAACACAGATCCAAGGA 124660 | ||||| ||||| ||||| | || || |||||||| |||||| |||||||| Sbjct 5168816 ATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGT 5168757 Query 124661 CGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTA 124704 ||||| |||| | | | || ||||||| | |||||||| Sbjct 5168756 CGCATACCTAGACGGAAACTAAGCTCCCACTCACGACCCATGTA 5168713 >seq36 Length=917149 Score = 131 bits (144), Expect = 2e-25 Identities = 206/290 (71%), Gaps = 4/290 (1%) Strand=Plus/Plus Query 124744 ATAAGGACCACCATTATACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAA 124803 |||||||||||| || || |||||||||||||||| || |||||||||||||| || || Sbjct 329710 ATAAGGACCACCGTTGTATAACCATTCATCAACAGAAGCCGCTTCCCAGATTGGATAAAA 329769 Query 124804 GTGTAGTCCGATAGCGTTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATA 124863 ||| | || ||||| || | |||| || ||||| || || || ||||| ||||| Sbjct 329770 GTGCAAACCTATAGCTGCAGAAGTCGGAATAATGGCACCGGAAATAATATTGTTGCCATA 329829 Query 124864 TAAGAAAGAACCCGCTACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAAT 124923 | | ||| || | || ||||| | || || || ||||| || ||||| ||||| Sbjct 329830 AAGTAGAGATCCTGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAATGGCAAT 329889 Query 124924 AAATGCAACGATGAA-ACATGCTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAA 124982 || || | || || ||| | | ||| || | ||| || ||||| | |||||||| Sbjct 329890 GAAGGCGATAATAAATACA-GAAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAA 329948 Query 124983 ACCAACCAACATAAATTCTGTTGTTTGTTGAT-GTTACCCACTCACAGAA 125031 |||| |||| |||| | ||| || | || | |||| | | | |||||| Sbjct 329949 ACCATCCAATGTAAAGACGGTT-TTCGGTGCTGGTTATCTAGTTACAGAA 329997 >seq4826 Length=244980 Score = 111 bits (122), Expect = 2e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | |||| || || || ||||||| || || ||||| || || Sbjct 300 TTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 359 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || ||||| || | ||||| || || || ||||| Sbjct 360 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTTGTGTAGAA 419 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || |||||||| || | || || ||||| || ||||| || || | Sbjct 420 AGTCTCAAATTCAGGATCTTCTGCCGCGCGAATTTCCTGAGAAACGAAGTCATAGGCGCG 479 Query 123046 GAGGTTAAGTGCTAGACCTAC 123066 |||||| || || ||||| || Sbjct 480 GAGGTTCAGGGCCAGACCAAC 500 >seq4 Length=35924511 Score = 107 bits (118), Expect = 2e-18 Identities = 178/257 (69%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 124040 TCAGCAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATA 124099 ||| ||| |||| |||||| | |||||| || ||||| ||| |||||||||| || Sbjct 4757475 TCAACAGCAGCTAAGTCTAGAGAGAAGTTATGAGCATTATGTTCGAGCATAACTTCTTTA 4757416 Query 124100 CCCAAGTTTGCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCA 124159 || | || || | ||| | | |||| | || || | | | | | |||| Sbjct 4757415 CCAAGATTAGCGCGGTTAATGATATCAGCTCAAGTATTAATTACACAGGCTTGACTATCA 4757356 Query 124160 ACAACTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATA 124219 || || |||||||| || |||||| |||| | |||||| | ||| |||| |||||| | | Sbjct 4757355 ACTACAGATTGGTTGAAATTGAAATCATTTAGGTTGAAAGTCATAGTGCTGATACCTAAA 4757296 Query 124220 GAGGTTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAG 124279 | || ||||| | || || ||||| || | |||||||||||||| | | | ||| Sbjct 4757295 GCAGTAAACCAGATACTTATTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAG 4757236 Query 124280 TTGTTGAATGAAGCATA 124296 |||||||| |||||| Sbjct 4757235 TTGTTGAAACTAGCATA 4757219 >seq1731 Length=31681 Score = 105 bits (116), Expect = 8e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | |||| || || || ||||||| || | ||||| || || Sbjct 4098 TTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGGTTTCATGAGGCTG 4157 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || ||||| || | ||||| || || || ||||| Sbjct 4158 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTTGTGTAGAA 4217 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || |||||||| || | || || ||||| || ||||| || || | Sbjct 4218 AGTCTCAAATTCAGGATCTTCTGCCGCGCGAATTTCCTGAGAAACGAAGTCATAGGCGCG 4277 Query 123046 GAGGTTAAGTGCTAGACCTAC 123066 |||||| || || ||||| || Sbjct 4278 GAGGTTCAGGGCCAGACCAAC 4298 >seq1 Length=51465339 Score = 104 bits (114), Expect = 3e-17 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376 || || ||||| ||||| || || || |||||||||| ||| || || || ||||| || Sbjct 36032201 TGAGCAGTGCATATGTTGCTTGTAGCCTTGTCTCTTCGAATGTGTTGTTCCCTAGTCTGC 36032260 Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTC--CACTGACTGACCTACAATTCTGC 139434 | ||| | | | ||||| ||||| || ||||||| ||| | |||||| | Sbjct 36032261 ATTGCCATACGTAAAGCAGGCTTGCCGGAAGAATCAACACTGAC--ACCAATAATTCTTC 36032318 Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494 | || ||| ||||||| || | | | |||||| | ||| || |||||||||||||| | Sbjct 36032319 CGGGCATCATTCTCTTGTAGTCCTGGGATGTTGCCAGGAAGGCTGCATGAGGACCTCCAT 36032378 Query 139495 ATCCCATAGGAATACCAAACCTTTG 139519 | ||||| || | ||||| ||||| Sbjct 36032379 AACCCATTGGTACTCCAAATCTTTG 36032403 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 138174 TGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAAT 138233 || ||| |||||||||||| || | ||||||||| || || ||||| ||||| |||||| Sbjct 36029418 TGCTTTTTTACACCAATAGGGCCCATGCCAGGACCACCTCCACCATGGGGAATGCAGAAT 36029477 Query 138234 GTCTTATGTAAATTTAGATGACATACATCTGCACC 138268 ||||| || | ||| | |||||| ||||| ||||| Sbjct 36029478 GTCTTGTGGAGATTCAAATGACAAACATCAGCACC 36029512 >seq3 Length=50312079 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTA-ACACTTCTTCTGGGAATACAAAATTCTCATGCGGTT 122924 |||||| ||||| || | |||| | ||| || | ||||||| || | ||||| | | Sbjct 34945959 TTAAAGAGCGTTTCCACGGGGTAGATACTCCT-CAGGGAATATAAGTCTTTCATGAGTCT 34945901 Query 122925 GGTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGA 122984 | || || | |||||| || | || ||||| || | ||||| || || || |||| Sbjct 34945900 GATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTTGTGTAGA 34945841 Query 122985 AAGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTC 123044 ||||||| || || || |||||||| || | || | ||||| || ||||| || || | Sbjct 34945840 AAGTCTCAAATTCAGGATCTTCTGCCGCGCGAATTTTCTGAGAAACGAAGTCATAGGCGC 34945781 Query 123045 TGAGGTTAAGTGCTAGACCTAC 123066 |||| || |||||||| || Sbjct 34945780 GCGGGTTCAGGGCTAGACCAAC 34945759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578963471921520