Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq4825 592 2e-164 seq6 399 3e-106 seq8 338 8e-88 seq36 168 9e-37 seq7 161 1e-34 seq4 118 1e-21 seq1 111 2e-19 >seq4825 Length=155848 Score = 592 bits (656), Expect = 2e-164 Identities = 731/994 (74%), Gaps = 4/994 (0%) Strand=Plus/Plus Query 26725 TCAGCAGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAAT 26784 ||| ||||||| | || | || || ||||| || || | |||||| || || || | Sbjct 286 TCAACAGCAGCTAAGTCTAGAGGGAAGTTATGAGCATTACGTTCGTGCATAACTTCCATA 345 Query 26785 CCAAGACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCA 26844 ||||| ||| ||||| | | || |||||||| || | ||||| || || |||| Sbjct 346 CCAAGGTTAGCGCGGTTAATGATATCAGCCCAAGTATTAATTACACGGCCTTGACTATCA 405 Query 26845 ATCACAGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGT 26904 | ||||| || ||||| |||||||| || || ||||||||||| ||| | ||| | Sbjct 406 ACTACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCTAAA 465 Query 26905 GCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAG 26964 || || |||||||| || || || ||||| ||||| ||||||||||| || ||||| ||| Sbjct 466 GCAGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAG 525 Query 26965 TTGTTGAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATG 27024 |||||||| ||||||||||||||| || || || || || ||||| || || ||||| Sbjct 526 TTGTTGAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCTACGATA 585 Query 27025 TTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTC 27084 || || || ||||||||||| |||||| | ||||| | || || ||| |||| || Sbjct 586 TTATAAGTTTCTTCTTCTTGCCCGAACCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 645 Query 27085 GTCTCACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCA 27144 || || | || | ||| || |||| | || ||||||||| || || || || Sbjct 646 GTTTCCCTGATCAAACTAGAGGTTACCAAAGAACCATGCATAGCACTAAATAGGGAACCG 705 Query 27145 CCGAATACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCC 27204 |||||||| ||||| || || | |||||| || |||||||||||||| ||||| || ||| Sbjct 706 CCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCC 765 Query 27205 TGGAATACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAA 27264 |||||||||| |||| |||| |||||||||||||| || ||||||||| |||| || || Sbjct 766 TGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAG 825 Query 27265 GAACCTTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAA 27324 |||||||||| || |||| | ||| || ||| | ||||| || || ||||| ||| Sbjct 826 CTTCCTTGACCGATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAA 885 Query 27325 TATGCTACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCC 27384 ||||| ||| ||||| || |||||||||| ||| | || ||||||||||| ||| Sbjct 886 TATGCAACAGCAATCCAAGGTCGCATACCTAGACGGAAACTAAGCTCCCACTCACGACCC 945 Query 27385 ATATAAGCATAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTA 27444 || ||| | | || | | ||||| | || | | || ||||||||||||| Sbjct 946 ATGTAACAAGCTACACCAAGTAAAAAGTGTAGAACGATTAATTCATAAGGACCACCGTTG 1005 Query 27445 TACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCA 27504 || ||||| ||||| | || || |||||||||||||| || ||||| | ||| || || Sbjct 1006 TATAACCATTCATCAACAGAAGCCGCTTCCCAGATTGGATAAAAGTGCAAACCTATAGCT 1065 Query 27505 TTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCA 27564 ||| | || | || ||||| ||||| || ||||||||||| | || || |||| | Sbjct 1066 GCAGAAGTCGGAATAATGGCACCGGAAATAATATTGTTGCCATAAAGTAGAGATCCAGAA 1125 Query 27565 ACGGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA- 27623 || |||||||||||||| |||||||| || || || || || ||||| |||| ||| || Sbjct 1126 ACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAAT 1185 Query 27624 GCAGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAA 27683 |||| |||||| | || | || |||||||||| ||||| ||||| |||| || | Sbjct 1186 ACAGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAG 1244 Query 27684 ACGGTTGTTAGTTGAT-GTCACCCACTCACAGAA 27716 |||||| || | || | || | ||| | |||||| Sbjct 1245 ACGGTT-TTCGGTGCTGGTTATCCAGTTACAGAA 1277 Score = 495 bits (548), Expect = 5e-135 Identities = 726/1021 (71%), Gaps = 6/1021 (1%) Strand=Plus/Minus Query 23386 ATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCAATTACAGGAAAGTTTTCGTGTGGTT 23445 || ||||||| || || | || || | |||||| | || |||||| || || | Sbjct 34156 ATTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 34097 Query 23446 GGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGA 23505 | || || | |||||| |||| | || | ||| || | ||||||||| ||||||| Sbjct 34096 GATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTTGTGTAGA 34037 Query 23506 AGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCAC 23565 | |||||| | | |||||| || || ||||| || ||| || || ||||| || | Sbjct 34036 AAGTCTCAAATTCAGGATCTTCTGCCGCGCGAATTTCCTGAGAAACGAAGTCATAGGCGC 33977 Query 23566 GAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAA 23625 | || || || || || |||| | |||| || | | ||| | ||| | || || | Sbjct 33976 GCAGGTTCAGGGCCAGACCAACTACTCCAAGAGCACTCATCCATAAACCAGTTACTGGTA 33917 Query 23626 CAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTG 23685 |||| ||||||||||| || |||||||| |||||| ||| |||||||| |||||||| | Sbjct 33916 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGG 33857 Query 23686 ACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACG 23745 ||||||| || || || || ||||| ||||| || || || | ||||| | | || | Sbjct 33856 ACCAAAAGCGGTTCGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAG 33797 Query 23746 CTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCAT 23805 | || || ||||| || ||||||||| | | ||||| || |||||| | |||| Sbjct 33796 CACGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCAT 33737 Query 23806 GAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGT 23865 ||||||| | || | || | |||| || || ||||||||||||||||| || |||| Sbjct 33736 GAATAGCGCATAGCAAAGCAGCGCCCAATACCCCTGCAACTCCCATCATATGAAATGGGT 33677 Query 23866 TGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACAC 23925 | | ||||| |||||||| || || | ||||| | ||| | || || || || |||| Sbjct 33676 TTAATGTCCAATTATGAAATCCTTGAAAAAAGAGGATGAATCGAAATATAGCTGCTACAC 33617 Query 23926 CGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACA 23985 | ||||| ||||||||||||||| || ||||| | ||||| || ||||||||||| | Sbjct 33616 CAAAACTTGGCGCAAAGAACCAACCAGATTGTCCTAGTGGATAAATCAGGAATACAGAAA 33557 Query 23986 CGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA- 24044 | || |||||||| ||||||||||| || || ||||| || || || | | || ||| Sbjct 33556 CAAAAACAGCAATTGGACCAGAAAACGCGATTGCATTATAAGGTCGCAATTGAAC-AGAT 33498 Query 24045 CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCA 24104 || || ||||| || ||||||||||| || ||||| ||| | || ||||| ||||| ||| Sbjct 33497 CGAGCAAGTTCGAATTGACGTAACATGAAGCCTATTAGTCCGAAAGCACCATGGAGGGCA 33438 Query 24105 ACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGA 24164 ||||| | ||| || || || | ||| ||| || ||| |||||||| | |||||| Sbjct 33437 ACAAAAGTCCACAGACCACCTAATTGACACCAACGAGTAAAATCCCCTTGTGCTTCAGGA 33378 Query 24165 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCG-T 24223 ||||| |||| | | |||||| | | | | |||||| || || || || || | | Sbjct 33377 CCCCACAGTAACAACAAAGAATGTGCTAAACTATTAGCAGGAGTAGAAACTGCGGCAGTT 33318 Query 24224 AAGAAAGTTAGCA-CCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTAA 24282 |||||| | ||| || || | ||||||||| || | ||||||||| ||||| || | Sbjct 33317 AAGAAA--TTGCAGCCTTCCAAATAGGAACTGGCCAATCCATGGGTATACCATGAAGTTA 33260 Query 24283 CAAAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAGGA 24342 |||| | ||| || || | ||| || || | || | ||| ||| |||| || | | Sbjct 33259 CAAAGGTTGTACCTGTGAACCAGCCTCCTACAGCGAAATAGGCACAAGGAAAGAGCAATA 33200 Query 24343 GTCCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATGTCAA 24402 | || ||||| || ||||| || || || |||| | |||||| |||| || |||| Sbjct 33199 GACCGGACCATCCTACAAAAACGAAACGGTCCCTCCGTAACCAGTCATCCATAATATCAA 33140 Query 24403 A 24403 | Sbjct 33139 A 33139 >seq6 Length=36610139 Score = 399 bits (442), Expect = 3e-106 Identities = 441/586 (75%), Gaps = 1/586 (0%) Strand=Plus/Minus Query 26775 CACCTCTAATCCAAGACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACC 26834 |||||| | ||||| ||| ||||| | | || |||||||| || | ||||| || Sbjct 34153093 CACCTCCATACCAAGGTTAGCGCGGTTAATGATATCAGCCCAAGTATTAATTACACGGCC 34153034 Query 26835 CTGTGAATCAATCACAGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGA 26894 || ||||| ||||| || ||||| |||||||| || || ||||||||||| ||| Sbjct 34153033 TTGACTATCAACTACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCT 34152974 Query 26895 TACACCAAGTGCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAA 26954 | ||| | || || |||||||| || || || ||||| ||||| ||||||||||| || Sbjct 34152973 GATACCTAAAGCAGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAA 34152914 Query 26955 GGAACGTGAGTTGTTGAATGAAGCATATTGGAAGATCAAACG-ACCGAAGTAGCCATGTG 27013 ||||| ||||||||||| ||||||||||||||| || || ||| || || ||||| | Sbjct 34152913 AGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATTAATCGGACCAAAATAACCATGAG 34152854 Query 27014 CTGCGACGATGTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACT 27073 | || ||||| || || || ||||||||||| |||||| | ||||| | || || | Sbjct 34152853 CGGCTACGATATTATAAGTTTCTTCTTCTTGCCCGAACCTGTAACCTTCATTAGCAGATT 34152794 Query 27074 CAGTTTCAGTCGTCTCACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGA 27133 || |||| || || || | || | ||| || |||| | || ||||||||| | Sbjct 34152793 CATTTTCTGTGGTTTCCCTGATCAAACTAGAGGTTACCAAAGAACCATGCATAGCACTAA 34152734 Query 27134 AAAGAGATCCACCGAATACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATAT 27193 | || || || |||||||| ||||| || || | |||||| || |||||||||||||| | Sbjct 34152733 ATAGGGAACCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGT 34152674 Query 27194 TGTGTTCTGCCTGGAATACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAG 27253 |||| || ||||||||||||| |||| |||| |||||||||||||| || ||||||||| Sbjct 34152673 TGTGCTCAGCCTGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATAC 34152614 Query 27254 CATCGGAGAAAGAACCTTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGA 27313 |||| || || |||||||||| || |||| | ||| || ||| | ||||| || | Sbjct 34152613 CATCAGAAAAGCTTCCTTGACCGATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAA 34152554 Query 27314 CTGGAGCAGAATATGCTACACAGATCCATGGACGCATACCTAAACG 27359 | ||||| |||||||| ||| ||||| || |||||||||| ||| Sbjct 34152553 CAGGAGCTGAATATGCAACAGCAATCCAAGGTCGCATACCTAGACG 34152508 >seq8 Length=31745509 Score = 338 bits (374), Expect = 8e-88 Identities = 354/465 (76%), Gaps = 0/465 (0%) Strand=Plus/Minus Query 26926 ACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTTGAATGAAGCATATTGG 26985 || ||||| ||||| ||||||||||| || ||||| ||||||||||| |||||||||| Sbjct 5169176 ACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGG 5169117 Query 26986 AAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTAGGTCTCTTCTTCTTGA 27045 ||||| || || || || || ||||| || || ||||| || || || ||||||||||| Sbjct 5169116 AAGATTAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAAGTTTCTTCTTCTTGC 5169057 Query 27046 CCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTCACGGACGAGTGAAGAT 27105 |||||| | ||||| | || || ||| |||| || || || | || | ||| Sbjct 5169056 CCGAACCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAG 5168997 Query 27106 GTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAATACCCCAGCAACACCG 27165 || |||| | || ||||||||| || || || || |||||||| ||||| || || Sbjct 5168996 GTTACCAAAGAACCATGCATAGCACTAAATAGGGAACCGCCGAATACACCAGCTACGCCT 5168937 Query 27166 AGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAATACAAGCATGTAGTTA 27225 | |||||| || |||||||||||||| ||||| || ||||||||||||| |||| |||| Sbjct 5168936 AACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAAGTTG 5168877 Query 27226 AAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACCTTGACCGAAAGGATAG 27285 |||||||||||||| || ||||||||| |||| || || |||||||||| || ||| Sbjct 5168876 AAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAGCTTCCTTGACCGATTGGGTAG 5168817 Query 27286 ACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGCTACACAGATCCATGGA 27345 | | ||| || ||| | ||||| || || ||||| |||||||| ||| ||||| || Sbjct 5168816 ATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGT 5168757 Query 27346 CGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCCATATAA 27390 |||||||||| ||| | || ||||||||||| ||||| ||| Sbjct 5168756 CGCATACCTAGACGGAAACTAAGCTCCCACTCACGACCCATGTAA 5168712 Score = 129 bits (142), Expect = 8e-25 Identities = 171/232 (74%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 27487 AAGTGGAGACCGATTGCATTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCA 27546 ||||| | ||| || || ||| | || | || ||||| ||||| || ||||||||| Sbjct 2878914 AAGTGCAAACCTATAGCTGCAGAAGTCGGAATAATGGCACCGGAAATAATATTGTTGCCA 2878855 Query 27547 TACATAAGTGAACCAGCAACGGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCG 27606 || | || || |||| ||| |||||||||||||| |||||||| || || || || || Sbjct 2878854 TAAAGTAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCA 2878795 Query 27607 ATGAATGCGACAATGAA-GCAGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACC 27665 ||||| |||| ||| || |||| |||||| | || | || |||||||||| ||||| Sbjct 2878794 ATGAAGGCGATAATAAATACAGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACC 2878736 Query 27666 GAACCAACCAACATACAAACGGTTGTTAGTTGAT-GTCACCCACTCACAGAA 27716 ||||| |||| || | |||||| || | || | || | ||| | |||||| Sbjct 2878735 AAACCATCCAATGTAAAGACGGTT-TTCGGTGCTGGTTATCCAGTTACAGAA 2878685 >seq36 Length=917149 Score = 168 bits (186), Expect = 9e-37 Identities = 195/260 (75%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 27431 AAGGACCACCGTTATACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGT 27490 ||||||||||||| || ||||| ||||| | || || |||||||||||||| || |||| Sbjct 329712 AAGGACCACCGTTGTATAACCATTCATCAACAGAAGCCGCTTCCCAGATTGGATAAAAGT 329771 Query 27491 GGAGACCGATTGCATTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACA 27550 | | ||| || || ||| | || | || ||||| ||||| || ||||||||||| | Sbjct 329772 GCAAACCTATAGCTGCAGAAGTCGGAATAATGGCACCGGAAATAATATTGTTGCCATAAA 329831 Query 27551 TAAGTGAACCAGCAACGGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGA 27610 || || || | ||| |||||||||||||| |||||||| || || || || |||| Sbjct 329832 GTAGAGATCCTGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAATGGCAATGA 329891 Query 27611 ATGCGACAATGAA-GCAGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAAC 27669 | |||| ||| || |||| |||||| | || | || |||||||||| ||||| ||| Sbjct 329892 AGGCGATAATAAATACAGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAAC 329950 Query 27670 CAACCAACATACAAACGGTT 27689 || |||| || | |||||| Sbjct 329951 CATCCAATGTAAAGACGGTT 329970 >seq7 Length=36358036 Score = 161 bits (178), Expect = 1e-34 Identities = 265/375 (71%), Gaps = 8/375 (2%) Strand=Plus/Plus Query 46980 ATCATCGCGGGAAGAACATGCGAACTTTCTAGGTCAAAATTATCATTTGGACCATATAGG 47039 |||| ||| || | |||||| ||| | || | | ||||||||||||||||||||| | Sbjct 18653857 ATCAACGCAGGCAAAACATGAGAATTCTCCGGATGAAAATTATCATTTGGACCATACAAA 18653916 Query 47040 TTTGTAGGCATCAAAGAGATAGCATTAAATCCATACTGCTGATGGTAT--GCCTGACACA 47097 || || ||||| ||| ||||||| ||| | |||| || ||| |||||||||| Sbjct 18653917 TTAGTGGGCATTGCAGAAATAGCATCAAAATTAAACTGA--ATCCTATAAGCCTGACACA 18653974 Query 47098 TCTTGATACCAGCAATCTTTGCAATAGCATAAGAATCATTACTAGGTTCAAGAGGACCAC 47157 |||| || || |||||||| ||||| ||||| | |||||| |||| || | ||||| Sbjct 18653975 TCTTAATTCCCGCAATCTTGGCAATGGCATACCACTCATTAGTAGGCTCCAACGGACCCG 18654034 Query 47158 TCATTAGATATTCTTCCCTAATAGGTTGT-TCACATAATTTTGGATAAATGCAGGAAGAA 47216 ||| | | | |||| ||||||||| | || ||||| |||||||| || |||||| Sbjct 18654035 TCAACAAAGCGTTTTCCACTATAGGTTGTGGCGCA-AATTTGGGATAAATACACGAAGAA 18654093 Query 47217 CCAAGAAATAAAAGTTTCTTAACACCAAACTTACGTGCAGAATGAATGATGTTTGATTGA 47276 || | ||||| || |||||||| ||| |||| || |||| ||| | || | ||| Sbjct 18654094 CCTAAAAATATAATCTTCTTAACGCCATTCTTAAAAGCCGAATCAATCACATTGGTCTGA 18654153 Query 47277 ATCATCAAATT-ATCATAGATGAAGTGTCCGGGATAATCCTTATTAGCACCAATACCACC 47335 || | ||| ||| | || || | | || ||| || |||||| ||| ||||| Sbjct 18654154 ATTTGAAGATTAATCGCA-ATAAAATCAGCAGGGTAAGTGTTGTTAGCATGAATGCCACC 18654212 Query 47336 CACCTTTGCAGCAGC 47350 || || ||||| || Sbjct 18654213 GACTTTCGCAGCTGC 18654227 >seq4 Length=35924511 Score = 118 bits (130), Expect = 1e-21 Identities = 181/258 (70%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 26725 TCAGCAGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAAT 26784 ||| ||||||| | || | | || ||||| || || |||| | || || ||| Sbjct 4757475 TCAACAGCAGCTAAGTCTAGAGAGAAGTTATGAGCATTATGTTCGAGCATAACTTCTTTA 4757416 Query 26785 CCAAGACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCA 26844 |||||| ||| ||||| | | || || ||||| || | |||| | || |||| Sbjct 4757415 CCAAGATTAGCGCGGTTAATGATATCAGCTCAAGTATTAATTACACAGGCTTGACTATCA 4757356 Query 26845 ATCACAGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGT 26904 | ||||| || ||||| |||||| | || || ||||||| ||| ||| | ||| | Sbjct 4757355 ACTACAGATTGGTTGAAATTGAAATCATTTAGGTTGAAAGTCATAGTGCTGATACCTAAA 4757296 Query 26905 GCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAG 26964 || || |||||||| | | || ||||| ||||| ||||||||||| || ||||| ||| Sbjct 4757295 GCAGTAAACCAGATACTTATTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAG 4757236 Query 26965 TTGTTGAATGAAGCATAT 26982 |||||||| ||||||| Sbjct 4757235 TTGTTGAAACTAGCATAT 4757218 Score = 95.1 bits (104), Expect = 2e-14 Identities = 140/196 (71%), Gaps = 7/196 (4%) Strand=Plus/Plus Query 23924 ACCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGA 23983 ||| ||||| |||||||||| ||| || |||| | ||||| || ||||||||| | Sbjct 12713288 ACCAAAACT--GCGCAAAGAATCAACCAGATTGTCATAGTGGATAAATCAGGAATACATA 12713345 Query 23984 CACGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATT----CCAA 24039 || || ||| |||| ||||||||||| || || ||||| || || || | | || | Sbjct 12713346 AACAAAAACAACAATCGGACCAGAAAACGCGATTGCATTATAAGGTCGCAATTGAACCGA 12713405 Query 24040 TTAGACGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGA 24099 | | | ||||| || |||| |||||| || |||| ||| | || ||||| || | Sbjct 12713406 TCAAGCAATTAAGTTCGAATTGACATAACAT-GAAGCTATTAGTCCGAAAGCACCATGAA 12713464 Query 24100 GAGCAACAAAGGACCA 24115 | |||||||| | ||| Sbjct 12713465 GGGCAACAAAAGTCCA 12713480 >seq1 Length=51465339 Score = 111 bits (122), Expect = 2e-19 Identities = 191/277 (69%), Gaps = 19/277 (7%) Strand=Plus/Minus Query 26785 CCAAGACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCA 26844 ||||| ||||||||| | || |||||||| || | |||| | || |||| Sbjct 27733415 CCAAGCTTAGCACGGTTATCGATATCAGCCCAAGTATTAATTACACAGTCTTGACTATCA 27733356 Query 26845 ATCACAGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTG--GATACACCAA 26902 | ||||| || ||||| ||||||| || |||||||||||||| ||| ||||| || Sbjct 27733355 ACTACAGATTGGTTGAAACTGAAACCATTTAGATTGAAAGCCATAGTGCTGATACCTTAA 27733296 Query 26903 GTGCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTG 26962 | | | |||||||| ||||| ||||||||||| || ||| | | Sbjct 27733295 GCTAG-TAAACCAGAT----ACAACT------------AGGAAGAAGTGTAAAGAATGAG 27733253 Query 26963 AGTTGTTGAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGA 27022 |||||||||| |||| ||||||| || || ||||| | || ||||| | | |||| Sbjct 27733252 AGTTGTTGAAACTAGCAGATTGGAATATTAATCGACCAATATAACCATGAGTGGGTACGA 27733193 Query 27023 TGTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACC 27059 | || | | ||||||||||| |||||| | ||||| Sbjct 27733192 TATTACAAGCTTCTTCTTCTTGCCCGAACCTGTAACC 27733156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665454254050320