Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq4825 663 0.0 seq6 426 2e-114 seq8 360 2e-94 seq36 161 1e-34 seq4 154 2e-32 seq4826 140 4e-28 seq1731 136 4e-27 seq1 122 1e-22 seq3 104 3e-17 seq5 95.1 1e-14 seq2 95.1 1e-14 >seq4825 Length=155848 Score = 663 bits (734), Expect = 0.0 Identities = 745/994 (75%), Gaps = 2/994 (0%) Strand=Plus/Minus Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827 |||||| | ||| | |||||||| | |||||||| || | || ||||||||| | Sbjct 1278 CTTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 1219 Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTC 165886 |||||| || ||| | ||| | |||||| |||| || || |||||||||| ||||||| Sbjct 1218 GATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTC 1160 Query 165887 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACA 165946 | || || || || || || || |||||||| || |||| ||||| | ||||| |||| Sbjct 1159 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACA 1100 Query 165947 ACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCA 166006 | || || || ||||| || |||| |||| || || ||| | ||||| ||||| | Sbjct 1099 ATATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAA 1040 Query 166007 TCTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTG 166066 |||||||||| || || |||| |||||| | || ||||||||||||| || | | | Sbjct 1039 TCTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGTCCTTATGAATTAATCG 980 Query 166067 TCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACC 166126 | | ||||| | |||| | | |||||||||||||||||||| || || || Sbjct 979 TTCTACACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCC 920 Query 166127 GTCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTG 166186 ||||||||||||| || ||||| |||||| || ||||| || || || ||||| | || Sbjct 919 GTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 860 Query 166187 CAGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAA 166246 | || ||| | | || || |||||||||| || || ||||||| ||||| || |||| Sbjct 859 CTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAA 800 Query 166247 TCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATC 166306 |||| || || ||||||| |||| | || ||||| ||||||||||| || || ||||| | Sbjct 799 TCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 740 Query 166307 CCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACG 166366 | || || ||| | ||||| ||||| ||||| || || | |||||||||||||| | Sbjct 739 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCATG 680 Query 166367 GAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACG 166426 | |||||| || ||| | | | || || || || |||| ||||| || | | Sbjct 679 GTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 620 Query 166427 GTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCG 166486 |||||| |||||| |||||||||||||| || || |||||||||||||||||||| || | Sbjct 619 GTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 560 Query 166487 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTG 166546 | || || ||||||||||| ||| ||||||||||| || || || ||||||||||| | Sbjct 559 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAG 500 Query 166547 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCA 166606 |||| |||||||| || || |||||||| || || | || || ||| ||||| |||| Sbjct 499 CTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGGCTTTCA 440 Query 166607 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 166666 |||| || |||||||| |||||||| || | ||||| |||| || ||||| | || | Sbjct 439 ACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATA 380 Query 166667 CCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACG 166726 | ||||| ||| | ||||||||||| || ||||||||||||||||| || ||||| | Sbjct 379 CTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCACGAACGTAATG 320 Query 166727 CACACAACTTCCCCCTCGACCTCGCTGCTGCTGA 166760 | || |||||||| || ||| | ||||||| ||| Sbjct 319 CTCATAACTTCCCTCTAGACTTAGCTGCTGTTGA 286 Score = 517 bits (572), Expect = 1e-141 Identities = 733/1023 (72%), Gaps = 12/1023 (1%) Strand=Plus/Plus Query 167014 TTTGATGTCCTCGATGACTGGCTTAAAAGGGATCGTTTTGTTTTTGTTGGCTGGTCTGGA 167073 |||||| | | ||||||||| | ||||| ||||| |||||||| || ||||| || Sbjct 33139 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGT 33198 Query 167074 CTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTC 167133 || | || ||||| ||| ||| | ||| | || || ||| | || || || || || Sbjct 33199 CTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGAGGCTGGTTCACAGGTACAACCTTT 33258 Query 167134 GTCACGAGTTGGTATACTCATGGACTCGCGTCCAGTT---ATCTTGAGGG-TGCGAACTT 167189 || || |||||||| |||||| | || ||||| || | || || ||| | || Sbjct 33259 GTAACTTCATGGTATACCCATGGATTGGC---CAGTTCCTATTTGGAAGGCTGCAA--TT 33313 Query 167190 TCTTA-CTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTTTACTTCTTCTAT 167248 ||||| |||| |||||| |||||| || || | | | |||||||| | | || | Sbjct 33314 TCTTAACTGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTGT 33373 Query 167249 GGGGTCCTGAATCTCAAGGGGATTTCGTCAGGTGGCTCCAACTTGGGGGACTCTGGGCTT 167308 ||||||||||| | ||||||||||| | ||| ||| | || || || ||| ||| Sbjct 33374 GGGGTCCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTT 33433 Query 167309 TTGTGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTG 167368 |||| || ||||| || || || | || || || |||||| | || || || ||||||| Sbjct 33434 TTGTTGCCCTCCATGGTGCTTTCGGACTAATAGGCTTCATGTTACGTCAATTCGAACTTG 33493 Query 167369 CTCGC-CTGATTGGTATCCGTCCCTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTC 167427 |||| ||| | | | || || || ||||| || || || |||||||| |||||||| Sbjct 33494 CTCGATCTGTTCAAT-TGCGACCTTATAATGCAATCGCGTTTTCTGGTCCAATTGCTGTT 33552 Query 167428 TTCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAGCTGGTTCTTTGCCCCGTCC 167487 || ||| || ||||| | ||||| || || ||| | ||||||||||| || Sbjct 33553 TTTGTTTCTGTATTCCTGATTTATCCACTAGGACAATCTGGTTGGTTCTTTGCGCCAAGT 33612 Query 167488 TTCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAAGGATTCCACAACTGGACA 167547 || || || || || || || |||||| ||||||| | |||||||| || || |||||| Sbjct 33613 TTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACA 33672 Query 167548 CTGAATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCA 167607 | || ||||||||||||||||| || ||||| | |||| | ||| ||||| | || Sbjct 33673 TTAAACCCATTTCATATGATGGGAGTTGCAGGGGTATTGGGCGCTGCTTTGCTATGCGCT 33732 Query 167608 ATCCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAGCAAGCAAACACTTTT 167667 || ||||||| ||| ||||| |||||||| | |||||||||||| ||||| || || Sbjct 33733 ATTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTC 33792 Query 167668 AAGGCATTCGATTCTACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTC 167727 || || | | ||||| | ||||| |||||||||||||| || || ||||| || Sbjct 33793 CGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCGAACCGCTTT 33852 Query 167728 TGGTCTCAGATCTTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTA 167787 ||||| || ||||| || ||||||| ||| ||||| ||| | ||||||||||||||| Sbjct 33853 TGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTA 33912 Query 167788 TTCGTTCCCGTTATGGGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCTCTTAAT 167847 || || || || | || | |||| | |||| | |||||||||| || || Sbjct 33913 TTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAAC 33972 Query 167848 CTTCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTTGAA 167907 || || || || || ||||||||||| || || | ||||| || ||||| || ||||| Sbjct 33973 CTGCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAGAAGATCCTGAATTTGAG 34032 Query 167908 ACTTTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGTTAGCACCTATC 167967 |||||||| || ||||| || || | || |||||| |||| || ||| | || || Sbjct 34033 ACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAA 34092 Query 167968 GATCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCAACGCACTA 168027 ||||| |||||||| ||| || | ||||| ||||| ||||| || || || ||||| || Sbjct 34093 GATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTT 34152 Query 168028 TAA 168030 ||| Sbjct 34153 TAA 34155 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 18119 CTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTA 18178 ||| | | ||||||||||||||||| || ||||| ||| ||||||| || |||||||| Sbjct 109231 CTCTCGTTATTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTA 109172 Query 18179 GGTTCAAATCCTACCTGGGGAG 18200 ||||| |||||||||||||||| Sbjct 109171 GGTTCGAATCCTACCTGGGGAG 109150 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 18119 CTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTA 18178 ||| | | ||||||||||||||||| || ||||| ||| ||||||| || |||||||| Sbjct 130810 CTCTCGTTATTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTA 130869 Query 18179 GGTTCAAATCCTACCTGGGGAG 18200 ||||| |||||||||||||||| Sbjct 130870 GGTTCGAATCCTACCTGGGGAG 130891 >seq6 Length=36610139 Score = 426 bits (472), Expect = 2e-114 Identities = 457/603 (76%), Gaps = 1/603 (0%) Strand=Plus/Plus Query 166108 GAGTGGGAACTGTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCA 166167 ||| |||| || || ||||||||||||||| || ||||| |||||| || ||||| Sbjct 34152490 GAGAGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCT 34152549 Query 166168 CCAGTCGCTGCTGCGAGTGCAGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCT 166227 || || || ||||| | ||| || ||| | | || || |||||||||| || || ||| Sbjct 34152550 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCT 34152609 Query 166228 GATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAG 166287 |||| ||||| || |||||||| || || ||||||| |||| | || ||||| |||||| Sbjct 34152610 GATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAG 34152669 Query 166288 CACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGT 166347 ||||| || || ||||| || || || ||| | ||||| ||||| ||||| || || Sbjct 34152670 CACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCC 34152729 Query 166348 TTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAA 166407 | |||||||||||||| || |||||| || ||| | | | || || || || ||| Sbjct 34152730 CTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAA 34152789 Query 166408 ACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTA 166467 | ||||| || | ||||||| |||||| |||||||||||||| || || |||||| Sbjct 34152790 AATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTA 34152849 Query 166468 GCCGCTCATGGTTACTTCGGT-CGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCG 166526 |||||||||||||| || ||| || || ||||||||||| ||| ||||||||||| || Sbjct 34152850 GCCGCTCATGGTTATTTTGGTCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCG 34152909 Query 166527 CTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGG 166586 || || ||||||||||| ||||| |||||||| || || |||||||| || || | || Sbjct 34152910 TTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGG 34152969 Query 166587 CGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGG 166646 || ||| ||||| |||||||| || |||||||| |||||||| || | ||||| | Sbjct 34152970 TATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAG 34153029 Query 166647 TCAGGGTCGTGTGTTGAACACCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGA 166706 ||| || ||||| | || || ||||| ||| | ||||||||||| || |||||||| Sbjct 34153030 TCAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGA 34153089 Query 166707 AGT 166709 || Sbjct 34153090 GGT 34153092 >seq8 Length=31745509 Score = 360 bits (398), Expect = 2e-94 Identities = 358/464 (77%), Gaps = 0/464 (0%) Strand=Plus/Plus Query 166096 TACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTT 166155 |||||||||||||||||||| || || ||||||||||||||| || ||||| |||| Sbjct 5168713 TACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTT 5168772 Query 166156 GCTTACTCAGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTAGTATATCCTTTCGGTCAA 166215 || || ||||| || || || ||||| | ||| || ||| | | || || |||||||| Sbjct 5168773 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAA 5168832 Query 166216 GGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATGTTGGTC 166275 || || || ||||||| ||||| || |||||||| || || ||||||| |||| | || Sbjct 5168833 GGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTA 5168892 Query 166276 TTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGGGGTA 166335 ||||| ||||||||||| || || ||||| || || || ||| | ||||| ||||| ||| Sbjct 5168893 TTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTA 5168952 Query 166336 TTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTTAGA 166395 || || || | |||||||||||||| || |||||| || ||| | | | || Sbjct 5168953 TTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGG 5169012 Query 166396 GAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAAACA 166455 || || || |||| ||||| || | ||||||| |||||| |||||||||||||| Sbjct 5169013 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACT 5169072 Query 166456 TACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTC 166515 || || |||||||||||||||||||| || || || || ||||||||||| ||| ||| Sbjct 5169073 TATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTC 5169132 Query 166516 AACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGT 166559 |||||||| || || || ||||||||||| ||||| |||||||| Sbjct 5169133 AACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGT 5169176 >seq36 Length=917149 Score = 161 bits (178), Expect = 1e-34 Identities = 210/288 (73%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827 |||||| | | | | |||||||| | |||||||| || | || ||||||||| | Sbjct 329998 CTTCTGTAACTAGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 329939 Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTC 165886 |||||| || ||| | ||| | |||||| |||| || || |||||||||| || || Sbjct 329938 GATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCCATTC 329880 Query 165887 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACA 165946 | || || || || || || || |||||||| || | || ||||| | ||||| |||| Sbjct 329879 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCAGGATCTCTACTTTATGGCAACA 329820 Query 165947 ACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCA 166006 | || || || ||||| || |||| |||| || || ||| | ||||| ||||| | Sbjct 329819 ATATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAA 329760 Query 166007 TCTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTT 166054 |||||||||| || || |||| |||||| | || ||||||||||||| Sbjct 329759 TCTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGTCCTT 329712 >seq4 Length=35924511 Score = 154 bits (170), Expect = 2e-32 Identities = 183/248 (74%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 166513 TTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGG 166572 ||||||||||| || || || ||||||||||| ||||| |||||||| | | |||||| Sbjct 4757228 TTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAATAAGTATCTGG 4757287 Query 166573 TTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 166632 || || || | || || ||| ||| | |||||||| || | |||||| |||||||| Sbjct 4757288 TTTACTGCTTTAGGTATCAGCACTATGACTTTCAACCTAAATGATTTCAATTTCAACCAA 4757347 Query 166633 TCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTTCTTAACCGCGCT 166692 || | ||||| |||| | |||| | || || || || ||| | ||||||||||| Sbjct 4757348 TCTGTAGTTGATAGTCAAGCCTGTGTAATTAATACTTGAGCTGATATCATTAACCGCGCT 4757407 Query 166693 GGTCTCGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCCCTCGACCTCGCT 166752 ||| |||| |||||||||| || | ||| || || |||||| | || ||| | ||| Sbjct 4757408 AATCTTGGTAAAGAAGTTATGCTCGAACATAATGCTCATAACTTCTCTCTAGACTTAGCT 4757467 Query 166753 GCTGCTGA 166760 |||| ||| Sbjct 4757468 GCTGTTGA 4757475 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/79 (85%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 166426 GGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTT-ACTT 166484 |||||||||||||| |||||||||||||| || || ||||||||| |||||||| | || Sbjct 4755093 GGTTACAAGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCATTCATGGTTAATTT 4755152 Query 166485 CGGTCGTTTGATCTTCCAA 166503 || || || ||||||||| Sbjct 4755153 TGGCCGATTAATCTTCCAA 4755171 >seq4826 Length=244980 Score = 140 bits (154), Expect = 4e-28 Identities = 151/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 167831 TTGGTCTGGCTCTTAATCTTCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGG 167890 |||||||||| || || || || || || || ||||||||||| || || | ||||| | Sbjct 499 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 440 Query 167891 AGGATCCAGAGTTTGAAACTTTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAG 167950 | ||||| || ||||| |||||||| || ||||| || || | || |||||| |||| | Sbjct 439 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 380 Query 167951 CATGGTTAGCACCTATCGATCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCC 168010 | ||| | || || ||||| |||||||| ||| || | ||||| ||||| ||||| | Sbjct 379 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTAC 320 Query 168011 CACGAGGCAACGCACTATAA 168030 | || || ||||| || ||| Sbjct 319 CCCGTGGAAACGCTCTTTAA 300 Score = 82.4 bits (90), Expect = 9e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 18128 TTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAAT 18187 |||||||||||||||| || ||||| ||| ||||||| || ||||||||||||| ||| Sbjct 209096 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 209155 Query 18188 CCTACCTGGGGAG 18200 ||| | ||||||| Sbjct 209156 CCTGCTTGGGGAG 209168 >seq1731 Length=31681 Score = 136 bits (150), Expect = 4e-27 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 167831 TTGGTCTGGCTCTTAATCTTCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGG 167890 |||||||||| || || || || || || || ||||||||||| || || | ||||| | Sbjct 4297 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 4238 Query 167891 AGGATCCAGAGTTTGAAACTTTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAG 167950 | ||||| || ||||| |||||||| || ||||| || || | || |||||| |||| | Sbjct 4237 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 4178 Query 167951 CATGGTTAGCACCTATCGATCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCC 168010 | ||| | || || ||||| |||||||| | | || | ||||| ||||| ||||| | Sbjct 4177 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAACCCTTATATTCCCTGAGGAGGTTCTAC 4118 Query 168011 CACGAGGCAACGCACTATAA 168030 | || || ||||| || ||| Sbjct 4117 CCCGTGGAAACGCTCTTTAA 4098 >seq1 Length=51465339 Score = 122 bits (134), Expect = 1e-22 Identities = 227/336 (68%), Gaps = 33/336 (10%) Strand=Plus/Plus Query 166426 GGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTC 166485 ||||||| |||||| |||||||||||| | | || |||||| || |||||||||| | Sbjct 27733156 GGTTACAGGTTCGGGCAAGAAGAAGAAGCTTGTAATATCGTACCCACTCATGGTTATATT 27733215 Query 166486 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTT 166545 ||||| || || ||||||| ||| ||||||||||| | || || ||||||||||| Sbjct 27733216 GGTCGATTAATATTCCAATCTGCTAGTTTCAACAACTCTCATTCTTTACACTTCTTCCT- 27733274 Query 166546 GCTGCATGGCCTGTTGTCGGCATCTGGTTCAC-CGCCCTTGGCGTCTCCACGATGGCATT 166604 ||||| |||||||| || || || || ||| ||||| || Sbjct 27733275 -----------AGTTGT----ATCTGGTTTACTAGCTTAAGGTATCAGCACTATGGCTTT 27733319 Query 166605 CAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAA 166664 ||| || || ||||||| |||||||| || | ||||| |||| | |||| | || Sbjct 27733320 CAATCTAAATGGTTTCAGTTTCAACCAATCTGTAGTTGATAGTCAAGACTGTGTAATTAA 27733379 Query 166665 CACCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAA 166724 || ||||| ||| | |||||| ||| || |||| || |||| Sbjct 27733380 TACTTGGGCTGATATCGATAACCGTGCTAAGCTTGGTA--------AT--------GTAA 27733423 Query 166725 CGCACACAACTTCCCCCTCGACCTCGCTGCTGCTGA 166760 || || |||||||| || ||| | ||||||| ||| Sbjct 27733424 TGCTCATAACTTCCCTCTAGACTTAGCTGCTGTTGA 27733459 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 18128 TTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAAT 18187 |||||||||||||||| || ||||| |||| ||||||| | | ||||||||||||||||| Sbjct 41486598 TTCCTCAGTAGCTCAGTGGTAGAGCGATCGGCTGTTAACCTACTGGTCGTAGGTTCAAAT 41486657 Query 18188 CCTACCTGGGGAG 18200 ||| ||||||| Sbjct 41486658 CCTGTTTGGGGAG 41486670 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 18119 CTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTA 18178 ||| | | ||||||||||||||||| || ||||| ||| ||||||| || | |||||| Sbjct 16908004 CTCTCGTTATTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACAGACTAGTCGTA 16908063 Query 18179 GGTTCAAATCCTACCTGGGGAG 18200 ||||| |||||||||| ||||| Sbjct 16908064 GGTTCGAATCCTACCTAGGGAG 16908085 >seq3 Length=50312079 Score = 104 bits (114), Expect = 3e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 167831 TTGGTCTGGCTCTTAATCTTCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGG 167890 ||||||| || || || | || || || || ||||||||||| | || | ||||| | Sbjct 34945760 TTGGTCTAGCCCTGAACCCGCGCGCCTATGACTTCGTTTCTCAGAAAATTCGCGCGGCAG 34945819 Query 167891 AGGATCCAGAGTTTGAAACTTTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAG 167950 | ||||| || ||||| |||||||| || ||||| || || | || |||||| |||| | Sbjct 34945820 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 34945879 Query 167951 CATGGTTAGCACCTATCGATCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCC 168010 | ||| | || || ||||| ||||||| | || | ||||| ||||| ||| | Sbjct 34945880 CTTGGATGGCGGCTCAAGATCAGACTCATGAAAGACTTATATTCCCTGAGGAGTATCTAC 34945939 Query 168011 CACGAGGCAACGCACTATAA 168030 | || || ||||| || ||| Sbjct 34945940 CCCGTGGAAACGCTCTTTAA 34945959 Score = 84.2 bits (92), Expect = 2e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 18127 ATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAA 18186 |||||| |||||||||| || ||||| |||| ||||||| || ||||||||||||| || Sbjct 21732937 ATTCCTTAGTAGCTCAGTGGTAGAGCGATCGGCTGTTAAGTGACTGGTCGTAGGTTCGAA 21732996 Query 18187 TCCTACCTG 18195 ||||||||| Sbjct 21732997 TCCTACCTG 21733005 >seq5 Length=41956025 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 18119 CTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTA 18178 ||| | | ||||||||||||||||| || ||||| ||| ||||||| || |||||||| Sbjct 36491943 CTCTCGTTATTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTA 36492002 Query 18179 GGTTCAAATCCTACCTGGGGAG 18200 ||||| |||||||||||||||| Sbjct 36492003 GGTTCGAATCCTACCTGGGGAG 36492024 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 18119 CTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTA 18178 ||| | | ||||||||||||||||| || ||||| ||| ||||||| || |||||||| Sbjct 34258797 CTCTCGTTATTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTA 34258856 Query 18179 GGTTCAAATCCTACCTGGGGAG 18200 ||||| |||||| ||||||||| Sbjct 34258857 GGTTCGAATCCTGCCTGGGGAG 34258878 >seq2 Length=43913520 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 18119 CTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTA 18178 ||| | | ||||||||||||||||| || ||||| ||| ||||||| || |||||||| Sbjct 5552191 CTCTCGTTATTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTA 5552132 Query 18179 GGTTCAAATCCTACCTGGGGAG 18200 ||||| |||||||||||||||| Sbjct 5552131 GGTTCGAATCCTACCTGGGGAG 5552110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561214142714400