Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq6 96.9 5e-15 >seq6 Length=36610139 Score = 96.9 bits (106), Expect = 5e-15 Identities = 159/227 (70%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGA-ACATAAC 146090 |||| || || | || ||||| |||||||| ||||||||| | || || || | | | Sbjct 34407445 TGCAGATTTTTGTGAAGACATTGACAGGAAAGACAATTACTTTGGAGGTGGAGAGCTCA- 34407503 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| | ||||| || ||||| || |||||||||||| ||||| || || Sbjct 34407504 GACACAATTGATAATGTGAAGGCAAAAATTCAGGATAAAGAAGGCATCCCACCAGACCAG 34407563 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || || || |||||||| ||||| || | || ||| | | || | | || || ||| Sbjct 34407564 CAGAGGCTGATTTTTGCTGGTAAGCAGCTTGAGGATGGTCGTACCCTTGCTGACTACAAT 34407623 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 || || |||||||| || |||| || || | || | ||||| || Sbjct 34407624 ATTCAGAAAGAATCTACCCTCCACTTGGTGCTCCGTCTTAGAGGTGG 34407670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786118974511920