Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq3 156 3e-33 seq6 150 1e-31 seq7 129 5e-25 seq1 107 1e-18 seq15 96.9 3e-15 seq2 84.2 2e-11 >seq3 Length=50312079 Score = 156 bits (172), Expect = 3e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || |||| |||||| |||||||| ||||||||||| ||||| || Sbjct 6143950 CCACCTCTCAACCTCAATACCAGATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCC 6143891 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || | ||| || |||||| | ||||| || ||||| || || ||| Sbjct 6143890 AATGTCCTACCATCCTCCAATTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGGGGA 6143831 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| |||||||| |||||| | ||| ||| | || | || |||||| |||||| Sbjct 6143830 ATTCCCTCCTTGTCTTG-AATTTTCGCTTTCACATTGTCAATTGTATCAGAACTTTCTAC 6143772 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| || || || || ||||| | || |||||||| || ||||| Sbjct 6143771 TTCAAGGGTAATCGTCTTCCCAGTGAGAGTCTTAACAAAGATTTGCAT 6143724 Score = 150 bits (166), Expect = 1e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||| ||||||||||| || || || || |||||||| ||||| || | ||| || Sbjct 6143255 ACGCAGAACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGCTAAGGTCCGTCC 6143196 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | || | || |||||||| || || ||||| || || Sbjct 6143195 ATCCTCTAGCTGCTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAGGGATACCTTCCTT 6143136 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | ||||||| | || | |||||| ||| ||| || || || || | Sbjct 6143135 GTCTTG-AATCTTCGCTTTGACATTGTCAATAGTGTCCGAACTTTCAACCTCGAGGGTGA 6143077 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || |||||||| | ||||| |||||||||||||| Sbjct 6143076 TTGTCTTGCCAGTAAGAGTTTTCACAAATATCTGCAT 6143040 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||||||| || || ||||| || || |||||||| || |||| ||| || | Sbjct 6143710 CGGAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTATAGTCAGCAAGGGTACGCCCA 6143651 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| || ||||||||| | || | || ||||| || || || |||||||| ||| Sbjct 6143650 TCTTCGAGCTGCTTGCCAGCAAAAATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTG 6143591 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || ||||||| | || | ||| |||||| ||| ||||| ||||| ||| Sbjct 6143590 TCCTGGATCTTAGCTTTGACATTATCAATAGTATCAGAACTTTCAACTTCTAGAGTGATA 6143531 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || | ||| || || || ||||||||| Sbjct 6143530 GTCTTTCCGGTAAGGGTCTTTACGAAAATCTGCATT 6143495 Score = 143 bits (158), Expect = 2e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||| ||||||||||| || || || || |||||||| ||||| || | ||| || Sbjct 6143483 ACGCAGAACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCGGCCAAGGTCCGTCC 6143424 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || ||||| |||||| | || | || ||||| || || || |||||||| || Sbjct 6143423 ATCCTCTAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTT 6143364 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||||| | || | || ||||| ||| ||||| ||||| || Sbjct 6143363 GTCCTGGATCTTAGCTTTGACATTATCAATGGTATCAGAGCTTTCGACTTCTAGAGTGAT 6143304 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||| |||||||| | || || ||||| ||||||||| Sbjct 6143303 AGTCTTGCCAGTAAGTGTCTTTACAAAAATCTGCATT 6143267 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | || ||| ||||||| |||||| || || || |||||||| || || || || Sbjct 6144178 CCTCCACGCAGACGAAGCACCAGATGAAGGGTAGACTCCTTTTGAATATTGTAGTCGGCC 6144119 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || || |||||| |||| | || ||||| || || || Sbjct 6144118 AGTGTGCGGCCATCCTCCAGCTGCTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGG 6144059 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || ||||| || ||| |||| ||| ||| | || | ||||| || || || Sbjct 6144058 ATGCCTTCCTTGTCCTG-AATCTTTGCTTTCACATTATCAATGGTGTCTGAGCTCTCAAC 6144000 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || ||||| || ||||| | || || |||||||||||||| Sbjct 6143999 CTCAAGTGTGATAGTCTTCCCAGTCAGAGTCTTCACAAATATCTGCAT 6143952 >seq6 Length=36610139 Score = 150 bits (166), Expect = 1e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||||||||| || ||||| || || || || || || |||| ||||||| Sbjct 34079341 ACGGAGCACCAAATGAAGGGTTGATTCCTTCTGGATATTGTAGTCAGCAAGGGTGCGACC 34079282 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || || || ||||||||| | || | ||| ||||| || || || || ||||| || Sbjct 34079281 GTCTTCCAGCTGCTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTT 34079222 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||||| | || | ||||||||| ||| ||||| || || || Sbjct 34079221 GTCCTGGATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCAACTTCTAGGGTGAT 34079162 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | || ||||||||||||||||| Sbjct 34079161 TGTCTTGCCAGTAAGTGTCTTAACAAATATCTGCAT 34079126 Score = 150 bits (166), Expect = 1e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||||||||| || ||||| || ||||| || ||||| || | ||| ||| Sbjct 34641561 ACGAAGAACCAAATGAAGGGTCGATTCCTTCTGAATATTGTAATCAGCTAAGGTACGACC 34641502 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || ||||| |||||| | || | || |||||||| || || ||||| ||||| Sbjct 34641501 ATCCTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAGGGATACCTTCTTT 34641442 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | |||||| | || | ||||| || |||||| |||||||| | Sbjct 34641441 GTCTTG-AATCTTAGCCTTGACATTGTCAATGGTGTCCGAGCTTTCTACCTCAAGAGTGA 34641383 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || ||||| | ||||| ||||| |||||||| Sbjct 34641382 TGGTCTTCCCAGTAAGAGTTTTCACAAAGATCTGCAT 34641346 Score = 145 bits (160), Expect = 6e-30 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||||||||| |||||||| || ||||| || ||||| || | ||||||| Sbjct 34079113 ACGAAGAACCAAATGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCTAAGGTGCGACC 34079054 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || ||||| |||||| | || | || |||||||| || || ||||| || || Sbjct 34079053 ATCCTCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGAGGGATACCTTCCTT 34078994 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | |||||| | || | ||||| || |||||| |||||||| | Sbjct 34078993 GTCTTG-AATCTTAGCCTTGACATTGTCAATGGTGTCTGAGCTTTCTACCTCAAGAGTGA 34078935 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || | || || ||||| |||||||| Sbjct 34078934 TGGTCTTCCCGGTAAGAGTCTTCACAAAGATCTGCAT 34078898 Score = 143 bits (158), Expect = 2e-29 Identities = 164/218 (75%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| | |||||| || || ||||||||||| || || || |||| ||||| Sbjct 34642245 ACGGAGCACAAGATGAAGGGTAGACTCTTTTTGAATATTGTAGTCTGCAAGTGTGCGGCC 34642186 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| |||||| |||| | || ||||| || || || || ||||| || Sbjct 34642185 ATCTTCAAGTTGTTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTT 34642126 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| |||| ||||||| | || | ||||||||| || || || || || | Sbjct 34642125 GTCTTG-AATCTTTGCTTTGACATTATCAATAGTGTCAGAGCTCTCCACCTCTAGCGTGA 34642067 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | || || || || || || || ||||| ||||||||| Sbjct 34642066 TGGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCATT 34642029 Score = 141 bits (156), Expect = 7e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||||||||| || ||||| || || ||||| || || |||| ||||||| Sbjct 34641789 ACGGAGCACCAAATGAAGGGTCGATTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACC 34641730 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || || || ||||||||| | || | ||| ||||| || || || || ||||| || Sbjct 34641729 GTCTTCCAGCTGCTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTT 34641670 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||| ||| | || | ||||||||| ||| ||||| || || || Sbjct 34641669 GTCCTGGATCTTAGCTTTAACATTATCAATAGTGTCAGAGCTTTCAACTTCTAGGGTGAT 34641610 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| | || |||||||| |||||||| Sbjct 34641609 GGTCTTTCCAGTAAGTGTCTTAACAAAGATCTGCAT 34641574 Score = 138 bits (152), Expect = 9e-28 Identities = 163/218 (75%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| | ||| || || || ||||||||||| || || || |||| ||||| Sbjct 34079797 ACGGAGCACAAGATGGAGGGTAGACTCTTTTTGAATATTGTAGTCTGCAAGTGTGCGGCC 34079738 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| |||||| |||| | || ||||| || || || || |||||||| Sbjct 34079737 ATCTTCAAGTTGTTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCCTCTTT 34079678 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| |||| ||||||| | || | |||||| || || || || || || | Sbjct 34079677 GTCTTG-AATCTTTGCTTTGACATTATCAATAGTGTCGGAGCTCTCCACCTCTAGCGTGA 34079619 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | || || || || || || || ||||| ||||||||| Sbjct 34079618 TGGTCTTTCCTGTCAAAGTCTTCACAAAAATCTGCATT 34079581 Score = 134 bits (148), Expect = 1e-26 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || |||||||||||||| || || || || || |||||||| || |||| || || Sbjct 34407202 CGGAGCACCAAATGAAGGGTTGACTCCTTCTGGATGTTATAGTCAGCAAGAGTACGGCCG 34407143 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || || |||||| | || | || ||||| ||||| || |||||||| || Sbjct 34407142 TCTTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCCGGTGGGATACCCTCCTTA 34407083 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || ||| || | ||||||| | || | ||||||||| ||| ||||| | || || Sbjct 34407082 TCCTG-AATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCAACTTCTAAGGTAAT 34407024 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || ||||| | ||| |||||||| |||||||| Sbjct 34407023 AGTCTTTCCAGTAAGGGTCTTAACAAAAATCTGCAT 34406988 Score = 132 bits (146), Expect = 4e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||||||||| |||||||| || ||||| ||||| || || | || | Sbjct 34406747 ACGAAGAACCAAATGAAGGGTGGATTCCTTCTGAATATTATAGTCAGCTAAAGTCCTTCC 34406688 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| |||||||| ||| | || | || |||||||| || || || || || || Sbjct 34406687 ATCCTCGAGCTGTTTGCCCGCAAAGATAAGCCTCTGCTGATCGGGAGGGATGCCTTCCTT 34406628 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | |||||| | || | |||||||| ||| || ||||| |||| Sbjct 34406627 GTCTTG-AATCTTAGCCTTGACATTGTCGATTGTGTCAGAGCTTTCAACCTCAAGGGTTA 34406569 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || | ||||| ||||| |||||||| Sbjct 34406568 TGGTCTTTCCGGTAAGAGTTTTCACAAAGATCTGCAT 34406532 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| ||||||| | ||| |||||||| || |||||||| || ||||| || ||||| || Sbjct 34407443 TCCACCCCTCAGCCTCAGTACCAAATGGAGTGTGGATTCCTTCTGAATATTGTAATCAGC 34407384 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || | ||| || | || ||||||||| | ||||| || ||||| ||||| || Sbjct 34407383 CAATGTCCTTCCATCCTCCAACTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGG 34407324 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || |||||||| | |||| || ||| | || | || || ||| |||||| Sbjct 34407323 GATTCCTTCCTTGTCTTGGATTTTTGCCTTCACATTGTCAATTGTATCCGAACTTTCTAC 34407264 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| || || || || || || | ||| || ||||| || ||||| Sbjct 34407263 TTCAAGGGTGATTGTCTTCCCTGTGAGGGTCTTGACAAAGATTTGCAT 34407216 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| ||||||| | || ||||||||||| |||||||| || |||||||| ||||| || Sbjct 34079581 TCCACCCCTCAGCCTCAATACCAAATGAAGAGTGGATTCCTTCTGAATGTTGTAATCTGC 34079522 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||| | || || | || || |||||| ||||||| || |||||||| || || Sbjct 34079521 CAAGGTCCTTCCGTCCTCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGATCTGGAGG 34079462 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| ||||| |||||||| | ||| || ||| | || | || || || ||||| Sbjct 34079461 AATTCCCTCCTTGTCTTGGATCTTTGCCTTAACATTGTCGATCGTATCGGAGCTCTCTAC 34079402 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||| | || || || || ||||| | ||| || ||||| || |||||| Sbjct 34079401 TTCCAAGGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAGATTTGCATT 34079353 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||| |||||| |||||||| || ||||| || ||||| || | || ||| Sbjct 34406975 ACGAAGAACCAGATGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCTAATGTACGACC 34406916 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || |||||||| || | || | || |||||||| || ||||| || || || Sbjct 34406915 ATCCTCAAGCTGTTTGCCCGCGAAGATAAGCCTCTGCTGATCAGGAGGAATGCCTTCCTT 34406856 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | || ||| | || | |||||||| ||| ||||| | || | Sbjct 34406855 GTCCTG-AATCTTAGCCTTAACATTGTCAATGGTGTCAGAGCTTTCAACTTCTAAGGTAA 34406797 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || |||||||| | ||||||||||| |||||||| Sbjct 34406796 TGGTCTTGCCAGTGAGTGTTTTAACAAAGATCTGCAT 34406760 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| ||||||| | || ||||||||||| |||||||| ||||||||||| ||||| || Sbjct 34642029 TCCACCCCTCAGCCTCAATACCAAATGAAGTGTGGATTCCTTTTGAATGTTGTAATCTGC 34641970 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || | || || | || || |||||| ||||||| || |||||||| || || Sbjct 34641969 CAATGTCCTTCCGTCCTCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGATCTGGAGG 34641910 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| |||||||||||||| | ||| || ||| | || | || ||||| ||||| Sbjct 34641909 AATTCCCTCTTTGTCTTGGATCTTTGCCTTAACATTGTCAATTGTATCAGAGCTCTCTAC 34641850 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || || || ||||| | || || ||||| || ||||| Sbjct 34641849 CTCCAAGGTAATTGTCTTTCCAGTAAGCGTCTTGACAAAGATTTGCAT 34641802 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| || |||||||| || ||||| || || || | || | Sbjct 34407887 ACGAAGGACAAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGCCAAAGTCCTTCC 34407828 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | ||||| || |||||||| || || || |||||||| Sbjct 34407827 ATCCTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGAGGGATGCCCTCTTT 34407768 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | || ||| | || | ||||| || ||| ||||| ||||| | Sbjct 34407767 GTCCTG-AATCTTCGCCTTCACATTATCAATCGTGTCCGAGCTTTCAACTTCTAGAGTGA 34407709 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || ||||| || || || ||||| |||||||| Sbjct 34407708 TCGTCTTCCCAGTCAACGTCTTGACAAAGATCTGCAT 34407672 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| ||||| ||||| || ||||| || || || | ||| | Sbjct 34642473 ACGAAGAACAAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCCAGGGTTCTTCC 34642414 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | || || |||||| | ||||| | || ||||| || || || |||||||| Sbjct 34642413 ATCCTCCAACTGCTTTCCAGCAAAAATCAAACGCTGTTGATCTGGTGGGATTCCCTCTTT 34642354 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | ||| || ||| | || | || || || || || || | || || Sbjct 34642353 GTCCTGGATTTTCGCCTTCACATTATCAATTGTATCTGAGCTCTCAACCTCCAAGGTGAT 34642294 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || |||||||| || || || ||||| || |||||| Sbjct 34642293 GGTCTTGCCAGTCAATGTCTTCACAAAGATTTGCATT 34642257 >seq7 Length=36358036 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| || | ||| || ||||||||||| || ||||| || || |||||||| | Sbjct 16384076 CCTCCTCTGAGACGGAGGACCAAATGAAGGGTTGATTCCTTCCTGATATTATAATCATCC 16384135 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||| | ||| || |||||||| |||||| | ||||| ||||||||||| | || Sbjct 16384136 AACGTGCAATTATCTTCTAGTTGTTTCCCAGCAAAGATCAACCTTTGCTGATCTCGAGGG 16384195 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| |||| | ||| || || |||||| | ||| ||||||| || || || Sbjct 16384196 ATCCCCTCCTTGTACT-CAATCTTAGTCTTGACATTGTCTGCAGTGTCGGAGCTTTTGAC 16384254 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| ||||| ||||| || | ||||| || || || ||||| Sbjct 16384255 CTCCAGAGTAATAGTCTTGCCCGTAAGAGTTTTCACGAAAATTTGCAT 16384302 Score = 105 bits (116), Expect = 5e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 || || ||||| || || || ||||| || || || | ||| | || ||||| || Sbjct 14364751 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGC 14364692 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 ||||| || | || | | ||||| |||||||| || || ||||||||||| ||| || Sbjct 14364691 TTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCTTTGTCTTG-AATCTT 14364633 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | ||||||| | || | ||||| || ||| || || || || ||||||||||| || Sbjct 14364632 GGCTTTGACATTGTCGATTGTGTCGGAGGATTCCACCTCCAGGGTGATAGTTTTGCCGGT 14364573 Query 29763 TAAGGTTTTAACAAATATCTGCATTTT 29789 | |||||| || || |||||||| || Sbjct 14364572 GAGGGTTTTCACGAAGATCTGCATCTT 14364546 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/228 (70%), Gaps = 8/228 (4%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||| ||||| || ||||| | || ||||| ||||| |||| || | |||||| Sbjct 2031518 ACCAAGTGAAGAGTAGATTCCCTCTGGATGTTGTAATCAGCAAGAGT---AAAATCATTT 2031574 Query 29638 ---AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||| ||||| || | || | || ||| | | ||||||||||| ||||| Sbjct 2031575 TTAAGTTGCTTGCCTGCGAAAATGAGCCTCTGCCCGTGCAAAGGAATACCCTCCTTGTCC 2031634 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || |||||| | | |||| | || | |||||| ||| |||| |||| | |||||||| Sbjct 2031635 TG-AATTTTAGCTCGGACACTATCAATAGTGTCCGAACTTTCTGCTTCTATGGTTATAGT 2031693 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAACGTATGCG 29801 || ||| | ||| || ||||| |||||||| | |||||| ||| Sbjct 2031694 CTTTGTAGTCAGGGTCTTCACAAAGATCTGCATGCCACAACGTAGGCG 2031741 >seq1 Length=51465339 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || ||||| || || || || || || || ||||| || || |||| ||| | ||| Sbjct 45560772 AGGACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATCC 45560713 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || || || || |||||| | ||||| || ||||| || || ||||||||||| ||||| Sbjct 45560712 TCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCC 45560653 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || |||||| | || | |||||||| || |||||||| || || || Sbjct 45560652 TGGATCTTGGCCTTGACATTGTCGATCGTGTCAGAGCTCTCGACTTCAAGGGTGATGGTC 45560593 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || || |||||||| Sbjct 45560592 TTCCCTGTCAAAGTCTTGACGAAGATCTGCAT 45560561 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 || || |||||||| || || ||||| || || || | ||| | || ||||| ||| Sbjct 30446251 TGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGT 30446310 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || || || | || | | |||||| || || || || || ||||||||||| | ||| Sbjct 30446311 TTTCCGGCGAAGATGAGGCGTTGCTGGTCGGGAGGGATGCCTTCTTTGTCTTGGATTTTG 30446370 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 ||||||| | || | ||||| || ||| || || || || || |||||||| || Sbjct 30446371 GCTTTGACATTGTCGATGGTGTCGGAGGATTCCACCTCCAGGGTGATGGTTTTGCCGGTG 30446430 Query 29764 AAGGTTTTAACAAATATCTGCATT 29787 | |||||| || || ||||||||| Sbjct 30446431 AGGGTTTTTACGAAGATCTGCATT 30446454 >seq15 Length=668940 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||| | ||| | ||||| || || || ||||| ||||| || | ||| | Sbjct 334906 ACGCAACACAAGATGGTGTGTGGACTCCTTCTGGATGTTGTAATCAGCCAGGGTCCTGCC 334847 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || | ||| || |||||| | ||||| | ||||| || ||||||||||| || || Sbjct 334846 GTCCTCCAATTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGCGGAATACCTTCCTT 334787 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || || | || | || || || || ||||| ||||| || Sbjct 334786 GTCCTGGATCTTAGCCTTCACGTTGTCAATGGTATCTGAGCTCTCAACTTCGAGAGTAAT 334727 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || || ||||| || ||||| |||||||| Sbjct 334726 AGTCTTCCCTGTCAAGGTCTTGACAAAGATCTGCAT 334691 >seq2 Length=43913520 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | || || ||||| || || || ||||| || || || | ||| | Sbjct 31249792 ACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCC 31249733 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || || || || || || | || | | ||||| ||||| || || || ||||| Sbjct 31249732 GTCCTCCAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCTTT 31249673 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || |||||| | || | ||||| ||| || || || ||||| || Sbjct 31249672 GTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCGACCTCGAGAGTGAT 31249613 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| |||| |||||| || || ||||||||||| Sbjct 31249612 GGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATTTT 31249574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385196542610466