Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20
2016-05-24] 4,826 sequences; 421,502,825 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq3 156 3e-33
seq6 150 1e-31
seq7 129 5e-25
seq1 107 1e-18
seq15 96.9 3e-15
seq2 84.2 2e-11
>seq3
Length=50312079
Score = 156 bits (172), Expect = 3e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || |||| |||||| |||||||| ||||||||||| ||||| ||
Sbjct 6143950 CCACCTCTCAACCTCAATACCAGATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCC 6143891
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || | ||| || |||||| | ||||| || ||||| || || |||
Sbjct 6143890 AATGTCCTACCATCCTCCAATTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGGGGA 6143831
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| ||||| |||||||| |||||| | ||| ||| | || | || |||||| ||||||
Sbjct 6143830 ATTCCCTCCTTGTCTTG-AATTTTCGCTTTCACATTGTCAATTGTATCAGAACTTTCTAC 6143772
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|||||| || || || || ||||| | || |||||||| || |||||
Sbjct 6143771 TTCAAGGGTAATCGTCTTCCCAGTGAGAGTCTTAACAAAGATTTGCAT 6143724
Score = 150 bits (166), Expect = 1e-31
Identities = 165/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
|||||| ||||||||||| || || || || |||||||| ||||| || | ||| ||
Sbjct 6143255 ACGCAGAACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGCTAAGGTCCGTCC 6143196
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || |||||| | || | || |||||||| || || ||||| || ||
Sbjct 6143195 ATCCTCTAGCTGCTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAGGGATACCTTCCTT 6143136
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| ||| || | ||||||| | || | |||||| ||| ||| || || || || |
Sbjct 6143135 GTCTTG-AATCTTCGCTTTGACATTGTCAATAGTGTCCGAACTTTCAACCTCGAGGGTGA 6143077
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || |||||||| | ||||| ||||||||||||||
Sbjct 6143076 TTGTCTTGCCAGTAAGAGTTTTCACAAATATCTGCAT 6143040
Score = 147 bits (162), Expect = 2e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| ||||||||||| || || ||||| || || |||||||| || |||| ||| || |
Sbjct 6143710 CGGAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTATAGTCAGCAAGGGTACGCCCA 6143651
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| ||||| || ||||||||| | || | || ||||| || || || |||||||| |||
Sbjct 6143650 TCTTCGAGCTGCTTGCCAGCAAAAATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTG 6143591
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || ||||||| | || | ||| |||||| ||| ||||| ||||| |||
Sbjct 6143590 TCCTGGATCTTAGCTTTGACATTATCAATAGTATCAGAACTTTCAACTTCTAGAGTGATA 6143531
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|| || || || | ||| || || || |||||||||
Sbjct 6143530 GTCTTTCCGGTAAGGGTCTTTACGAAAATCTGCATT 6143495
Score = 143 bits (158), Expect = 2e-29
Identities = 162/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
|||||| ||||||||||| || || || || |||||||| ||||| || | ||| ||
Sbjct 6143483 ACGCAGAACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCGGCCAAGGTCCGTCC 6143424
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || ||||| |||||| | || | || ||||| || || || |||||||| ||
Sbjct 6143423 ATCCTCTAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTT 6143364
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || ||||||| | || | || ||||| ||| ||||| ||||| ||
Sbjct 6143363 GTCCTGGATCTTAGCTTTGACATTATCAATGGTATCAGAGCTTTCGACTTCTAGAGTGAT 6143304
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||| |||||||| | || || ||||| |||||||||
Sbjct 6143303 AGTCTTGCCAGTAAGTGTCTTTACAAAAATCTGCATT 6143267
Score = 125 bits (138), Expect = 6e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| | || ||| ||||||| |||||| || || || |||||||| || || || ||
Sbjct 6144178 CCTCCACGCAGACGAAGCACCAGATGAAGGGTAGACTCCTTTTGAATATTGTAGTCGGCC 6144119
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||||| ||| || || || || |||||| |||| | || ||||| || || ||
Sbjct 6144118 AGTGTGCGGCCATCCTCCAGCTGCTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGG 6144059
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || ||||| || ||| |||| ||| ||| | || | ||||| || || ||
Sbjct 6144058 ATGCCTTCCTTGTCCTG-AATCTTTGCTTTCACATTATCAATGGTGTCTGAGCTCTCAAC 6144000
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || ||||| || ||||| | || || ||||||||||||||
Sbjct 6143999 CTCAAGTGTGATAGTCTTCCCAGTCAGAGTCTTCACAAATATCTGCAT 6143952
>seq6
Length=36610139
Score = 150 bits (166), Expect = 1e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| |||||||||||||| || ||||| || || || || || || |||| |||||||
Sbjct 34079341 ACGGAGCACCAAATGAAGGGTTGATTCCTTCTGGATATTGTAGTCAGCAAGGGTGCGACC 34079282
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| || || || ||||||||| | || | ||| ||||| || || || || ||||| ||
Sbjct 34079281 GTCTTCCAGCTGCTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTT 34079222
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || ||||||| | || | ||||||||| ||| ||||| || || ||
Sbjct 34079221 GTCCTGGATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCAACTTCTAGGGTGAT 34079162
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| |||||||| | || |||||||||||||||||
Sbjct 34079161 TGTCTTGCCAGTAAGTGTCTTAACAAATATCTGCAT 34079126
Score = 150 bits (166), Expect = 1e-31
Identities = 165/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || ||||||||||| || ||||| || ||||| || ||||| || | ||| |||
Sbjct 34641561 ACGAAGAACCAAATGAAGGGTCGATTCCTTCTGAATATTGTAATCAGCTAAGGTACGACC 34641502
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || ||||| |||||| | || | || |||||||| || || ||||| |||||
Sbjct 34641501 ATCCTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAGGGATACCTTCTTT 34641442
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| ||| || | |||||| | || | ||||| || |||||| |||||||| |
Sbjct 34641441 GTCTTG-AATCTTAGCCTTGACATTGTCAATGGTGTCCGAGCTTTCTACCTCAAGAGTGA 34641383
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || ||||| | ||||| ||||| ||||||||
Sbjct 34641382 TGGTCTTCCCAGTAAGAGTTTTCACAAAGATCTGCAT 34641346
Score = 145 bits (160), Expect = 6e-30
Identities = 164/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || ||||||||||| |||||||| || ||||| || ||||| || | |||||||
Sbjct 34079113 ACGAAGAACCAAATGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCTAAGGTGCGACC 34079054
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || ||||| |||||| | || | || |||||||| || || ||||| || ||
Sbjct 34079053 ATCCTCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGAGGGATACCTTCCTT 34078994
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| ||| || | |||||| | || | ||||| || |||||| |||||||| |
Sbjct 34078993 GTCTTG-AATCTTAGCCTTGACATTGTCAATGGTGTCTGAGCTTTCTACCTCAAGAGTGA 34078935
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || || || | || || ||||| ||||||||
Sbjct 34078934 TGGTCTTCCCGGTAAGAGTCTTCACAAAGATCTGCAT 34078898
Score = 143 bits (158), Expect = 2e-29
Identities = 164/218 (75%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||| | |||||| || || ||||||||||| || || || |||| |||||
Sbjct 34642245 ACGGAGCACAAGATGAAGGGTAGACTCTTTTTGAATATTGTAGTCTGCAAGTGTGCGGCC 34642186
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || |||||||| |||||| |||| | || ||||| || || || || ||||| ||
Sbjct 34642185 ATCTTCAAGTTGTTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTT 34642126
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| ||| |||| ||||||| | || | ||||||||| || || || || || |
Sbjct 34642125 GTCTTG-AATCTTTGCTTTGACATTATCAATAGTGTCAGAGCTCTCCACCTCTAGCGTGA 34642067
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
| || || || || || || || ||||| |||||||||
Sbjct 34642066 TGGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCATT 34642029
Score = 141 bits (156), Expect = 7e-29
Identities = 161/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| |||||||||||||| || ||||| || || ||||| || || |||| |||||||
Sbjct 34641789 ACGGAGCACCAAATGAAGGGTCGATTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACC 34641730
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| || || || ||||||||| | || | ||| ||||| || || || || ||||| ||
Sbjct 34641729 GTCTTCCAGCTGCTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTT 34641670
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || ||| ||| | || | ||||||||| ||| ||||| || || ||
Sbjct 34641669 GTCCTGGATCTTAGCTTTAACATTATCAATAGTGTCAGAGCTTTCAACTTCTAGGGTGAT 34641610
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || ||||| | || |||||||| ||||||||
Sbjct 34641609 GGTCTTTCCAGTAAGTGTCTTAACAAAGATCTGCAT 34641574
Score = 138 bits (152), Expect = 9e-28
Identities = 163/218 (75%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||| | ||| || || || ||||||||||| || || || |||| |||||
Sbjct 34079797 ACGGAGCACAAGATGGAGGGTAGACTCTTTTTGAATATTGTAGTCTGCAAGTGTGCGGCC 34079738
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || |||||||| |||||| |||| | || ||||| || || || || ||||||||
Sbjct 34079737 ATCTTCAAGTTGTTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCCTCTTT 34079678
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| ||| |||| ||||||| | || | |||||| || || || || || || |
Sbjct 34079677 GTCTTG-AATCTTTGCTTTGACATTATCAATAGTGTCGGAGCTCTCCACCTCTAGCGTGA 34079619
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
| || || || || || || || ||||| |||||||||
Sbjct 34079618 TGGTCTTTCCTGTCAAAGTCTTCACAAAAATCTGCATT 34079581
Score = 134 bits (148), Expect = 1e-26
Identities = 161/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| |||||||||||||| || || || || || |||||||| || |||| || ||
Sbjct 34407202 CGGAGCACCAAATGAAGGGTTGACTCCTTCTGGATGTTATAGTCAGCAAGAGTACGGCCG 34407143
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || || || || |||||| | || | || ||||| ||||| || |||||||| ||
Sbjct 34407142 TCTTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCCGGTGGGATACCCTCCTTA 34407083
Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|| || ||| || | ||||||| | || | ||||||||| ||| ||||| | || ||
Sbjct 34407082 TCCTG-AATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCAACTTCTAAGGTAAT 34407024
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| || ||||| | ||| |||||||| ||||||||
Sbjct 34407023 AGTCTTTCCAGTAAGGGTCTTAACAAAAATCTGCAT 34406988
Score = 132 bits (146), Expect = 4e-26
Identities = 161/217 (74%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || ||||||||||| |||||||| || ||||| ||||| || || | || |
Sbjct 34406747 ACGAAGAACCAAATGAAGGGTGGATTCCTTCTGAATATTATAGTCAGCTAAAGTCCTTCC 34406688
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| ||||| |||||||| ||| | || | || |||||||| || || || || || ||
Sbjct 34406687 ATCCTCGAGCTGTTTGCCCGCAAAGATAAGCCTCTGCTGATCGGGAGGGATGCCTTCCTT 34406628
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| ||| || | |||||| | || | |||||||| ||| || ||||| ||||
Sbjct 34406627 GTCTTG-AATCTTAGCCTTGACATTGTCGATTGTGTCAGAGCTTTCAACCTCAAGGGTTA 34406569
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || || || | ||||| ||||| ||||||||
Sbjct 34406568 TGGTCTTTCCGGTAAGAGTTTTCACAAAGATCTGCAT 34406532
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| ||||||| | ||| |||||||| || |||||||| || ||||| || ||||| ||
Sbjct 34407443 TCCACCCCTCAGCCTCAGTACCAAATGGAGTGTGGATTCCTTCTGAATATTGTAATCAGC 34407384
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
| || | ||| || | || ||||||||| | ||||| || ||||| ||||| ||
Sbjct 34407383 CAATGTCCTTCCATCCTCCAACTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGG 34407324
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || |||||||| | |||| || ||| | || | || || ||| ||||||
Sbjct 34407323 GATTCCTTCCTTGTCTTGGATTTTTGCCTTCACATTGTCAATTGTATCCGAACTTTCTAC 34407264
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|||||| || || || || || || | ||| || ||||| || |||||
Sbjct 34407263 TTCAAGGGTGATTGTCTTCCCTGTGAGGGTCTTGACAAAGATTTGCAT 34407216
Score = 129 bits (142), Expect = 5e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| ||||||| | || ||||||||||| |||||||| || |||||||| ||||| ||
Sbjct 34079581 TCCACCCCTCAGCCTCAATACCAAATGAAGAGTGGATTCCTTCTGAATGTTGTAATCTGC 34079522
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
| ||| | || || | || || |||||| ||||||| || |||||||| || ||
Sbjct 34079521 CAAGGTCCTTCCGTCCTCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGATCTGGAGG 34079462
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||| ||||| |||||||| | ||| || ||| | || | || || || |||||
Sbjct 34079461 AATTCCCTCCTTGTCTTGGATCTTTGCCTTAACATTGTCGATCGTATCGGAGCTCTCTAC 34079402
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||| | || || || || ||||| | ||| || ||||| || ||||||
Sbjct 34079401 TTCCAAGGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAGATTTGCATT 34079353
Score = 127 bits (140), Expect = 2e-24
Identities = 160/217 (74%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || |||| |||||| |||||||| || ||||| || ||||| || | || |||
Sbjct 34406975 ACGAAGAACCAGATGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCTAATGTACGACC 34406916
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || |||||||| || | || | || |||||||| || ||||| || || ||
Sbjct 34406915 ATCCTCAAGCTGTTTGCCCGCGAAGATAAGCCTCTGCTGATCAGGAGGAATGCCTTCCTT 34406856
Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | || ||| | || | |||||||| ||| ||||| | || |
Sbjct 34406855 GTCCTG-AATCTTAGCCTTAACATTGTCAATGGTGTCAGAGCTTTCAACTTCTAAGGTAA 34406797
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || |||||||| | ||||||||||| ||||||||
Sbjct 34406796 TGGTCTTGCCAGTGAGTGTTTTAACAAAGATCTGCAT 34406760
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| ||||||| | || ||||||||||| |||||||| ||||||||||| ||||| ||
Sbjct 34642029 TCCACCCCTCAGCCTCAATACCAAATGAAGTGTGGATTCCTTTTGAATGTTGTAATCTGC 34641970
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
| || | || || | || || |||||| ||||||| || |||||||| || ||
Sbjct 34641969 CAATGTCCTTCCGTCCTCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGATCTGGAGG 34641910
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||| |||||||||||||| | ||| || ||| | || | || ||||| |||||
Sbjct 34641909 AATTCCCTCTTTGTCTTGGATCTTTGCCTTAACATTGTCAATTGTATCAGAGCTCTCTAC 34641850
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | || || || || ||||| | || || ||||| || |||||
Sbjct 34641849 CTCCAAGGTAATTGTCTTTCCAGTAAGCGTCTTGACAAAGATTTGCAT 34641802
Score = 114 bits (126), Expect = 1e-20
Identities = 157/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||||| || |||||||| || ||||| || || || | || |
Sbjct 34407887 ACGAAGGACAAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGCCAAAGTCCTTCC 34407828
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || |||||| | ||||| || |||||||| || || || ||||||||
Sbjct 34407827 ATCCTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGAGGGATGCCCTCTTT 34407768
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | || ||| | || | ||||| || ||| ||||| ||||| |
Sbjct 34407767 GTCCTG-AATCTTCGCCTTCACATTATCAATCGTGTCCGAGCTTTCAACTTCTAGAGTGA 34407709
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || ||||| || || || ||||| ||||||||
Sbjct 34407708 TCGTCTTCCCAGTCAACGTCTTGACAAAGATCTGCAT 34407672
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||||| ||||| ||||| || ||||| || || || | ||| |
Sbjct 34642473 ACGAAGAACAAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCCAGGGTTCTTCC 34642414
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || | || || |||||| | ||||| | || ||||| || || || ||||||||
Sbjct 34642413 ATCCTCCAACTGCTTTCCAGCAAAAATCAAACGCTGTTGATCTGGTGGGATTCCCTCTTT 34642354
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | ||| || ||| | || | || || || || || || | || ||
Sbjct 34642353 GTCCTGGATTTTCGCCTTCACATTATCAATTGTATCTGAGCTCTCAACCTCCAAGGTGAT 34642294
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|| |||||||| || || || ||||| || ||||||
Sbjct 34642293 GGTCTTGCCAGTCAATGTCTTCACAAAGATTTGCATT 34642257
>seq7
Length=36358036
Score = 129 bits (142), Expect = 5e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| || | ||| || ||||||||||| || ||||| || || |||||||| |
Sbjct 16384076 CCTCCTCTGAGACGGAGGACCAAATGAAGGGTTGATTCCTTCCTGATATTATAATCATCC 16384135
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||| | ||| || |||||||| |||||| | ||||| ||||||||||| | ||
Sbjct 16384136 AACGTGCAATTATCTTCTAGTTGTTTCCCAGCAAAGATCAACCTTTGCTGATCTCGAGGG 16384195
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| ||||| |||| | ||| || || |||||| | ||| ||||||| || || ||
Sbjct 16384196 ATCCCCTCCTTGTACT-CAATCTTAGTCTTGACATTGTCTGCAGTGTCGGAGCTTTTGAC 16384254
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| ||||| ||||| || | ||||| || || || |||||
Sbjct 16384255 CTCCAGAGTAATAGTCTTGCCCGTAAGAGTTTTCACGAAAATTTGCAT 16384302
Score = 105 bits (116), Expect = 5e-18
Identities = 149/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
|| || ||||| || || || ||||| || || || | ||| | || ||||| ||
Sbjct 14364751 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGC 14364692
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
||||| || | || | | ||||| |||||||| || || ||||||||||| ||| ||
Sbjct 14364691 TTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCTTTGTCTTG-AATCTT 14364633
Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762
| ||||||| | || | ||||| || ||| || || || || ||||||||||| ||
Sbjct 14364632 GGCTTTGACATTGTCGATTGTGTCGGAGGATTCCACCTCCAGGGTGATAGTTTTGCCGGT 14364573
Query 29763 TAAGGTTTTAACAAATATCTGCATTTT 29789
| |||||| || || |||||||| ||
Sbjct 14364572 GAGGGTTTTCACGAAGATCTGCATCTT 14364546
Score = 95.1 bits (104), Expect = 9e-15
Identities = 160/228 (70%), Gaps = 8/228 (4%)
Strand=Plus/Plus
Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637
||||| ||||| || ||||| | || ||||| ||||| |||| || | ||||||
Sbjct 2031518 ACCAAGTGAAGAGTAGATTCCCTCTGGATGTTGTAATCAGCAAGAGT---AAAATCATTT 2031574
Query 29638 ---AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
||||| ||||| || | || | || ||| | | ||||||||||| |||||
Sbjct 2031575 TTAAGTTGCTTGCCTGCGAAAATGAGCCTCTGCCCGTGCAAAGGAATACCCTCCTTGTCC 2031634
Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| |||||| | | |||| | || | |||||| ||| |||| |||| | ||||||||
Sbjct 2031635 TG-AATTTTAGCTCGGACACTATCAATAGTGTCCGAACTTTCTGCTTCTATGGTTATAGT 2031693
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAACGTATGCG 29801
|| ||| | ||| || ||||| |||||||| | |||||| |||
Sbjct 2031694 CTTTGTAGTCAGGGTCTTCACAAAGATCTGCATGCCACAACGTAGGCG 2031741
>seq1
Length=51465339
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|| ||||| || || || || || || || ||||| || || |||| ||| | |||
Sbjct 45560772 AGGACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATCC 45560713
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| || || || |||||| | ||||| || ||||| || || ||||||||||| |||||
Sbjct 45560712 TCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCC 45560653
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | || |||||| | || | |||||||| || |||||||| || || ||
Sbjct 45560652 TGGATCTTGGCCTTGACATTGTCGATCGTGTCAGAGCTCTCGACTTCAAGGGTGATGGTC 45560593
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || || || ||||||||
Sbjct 45560592 TTCCCTGTCAAAGTCTTGACGAAGATCTGCAT 45560561
Score = 102 bits (112), Expect = 6e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
|| || |||||||| || || ||||| || || || | ||| | || ||||| |||
Sbjct 30446251 TGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGT 30446310
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
|| || || | || | | |||||| || || || || || ||||||||||| | |||
Sbjct 30446311 TTTCCGGCGAAGATGAGGCGTTGCTGGTCGGGAGGGATGCCTTCTTTGTCTTGGATTTTG 30446370
Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763
||||||| | || | ||||| || ||| || || || || || |||||||| ||
Sbjct 30446371 GCTTTGACATTGTCGATGGTGTCGGAGGATTCCACCTCCAGGGTGATGGTTTTGCCGGTG 30446430
Query 29764 AAGGTTTTAACAAATATCTGCATT 29787
| |||||| || || |||||||||
Sbjct 30446431 AGGGTTTTTACGAAGATCTGCATT 30446454
>seq15
Length=668940
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||||| ||| | ||| | ||||| || || || ||||| ||||| || | ||| |
Sbjct 334906 ACGCAACACAAGATGGTGTGTGGACTCCTTCTGGATGTTGTAATCAGCCAGGGTCCTGCC 334847
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| || | ||| || |||||| | ||||| | ||||| || ||||||||||| || ||
Sbjct 334846 GTCCTCCAATTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGCGGAATACCTTCCTT 334787
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || || || | || | || || || || ||||| ||||| ||
Sbjct 334786 GTCCTGGATCTTAGCCTTCACGTTGTCAATGGTATCTGAGCTCTCAACTTCGAGAGTAAT 334727
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| || || || ||||| || ||||| ||||||||
Sbjct 334726 AGTCTTCCCTGTCAAGGTCTTGACAAAGATCTGCAT 334691
>seq2
Length=43913520
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | || || ||||| || || || ||||| || || || | ||| |
Sbjct 31249792 ACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCC 31249733
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| || || || || || || | || | | ||||| ||||| || || || |||||
Sbjct 31249732 GTCCTCCAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCTTT 31249673
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || |||||| | || | ||||| ||| || || || ||||| ||
Sbjct 31249672 GTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCGACCTCGAGAGTGAT 31249613
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| ||||| |||| |||||| || || |||||||||||
Sbjct 31249612 GGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATTTT 31249574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385196542610466
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |