Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq4825 583 1e-161 seq6 403 2e-107 seq8 361 7e-95 seq36 134 2e-26 seq3 129 7e-25 seq4826 123 3e-23 seq1731 120 4e-22 seq2 114 2e-20 seq4 104 3e-17 seq1 96.9 4e-15 seq9 87.8 2e-12 >seq4825 Length=155848 Score = 583 bits (646), Expect = 1e-161 Identities = 731/994 (74%), Gaps = 8/994 (1%) Strand=Plus/Minus Query 177558 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177617 ||||| | ||| |||| ||| | ||||| || || | || ||||| || || || Sbjct 1277 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1218 Query 177618 ATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCC 177676 ||||| || ||| | ||| | |||||| |||| || || |||||||| | |||||||| Sbjct 1217 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 1159 Query 177677 CCCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 177736 || || || || || || || |||||||| || |||| || || | ||||| ||||| Sbjct 1158 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACAA 1099 Query 177737 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 177796 || || || ||||| || | || |||| || || ||| | ||||| ||||| || Sbjct 1098 TATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAAT 1039 Query 177797 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 177856 ||||||||| || || ||||||| ||| | || ||||||||||||| || | | || Sbjct 1038 CTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGTCCTTATGAATTAATCGT 979 Query 177857 CTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCG 177916 | ||||| | | || | | || ||||| ||||||||||| ||| | ||| Sbjct 978 TCTACACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCG 919 Query 177917 TCTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGC 177976 |||||||||||| || ||||| ||||||||| || || ||||||||||| || | || Sbjct 918 TCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 859 Query 177977 AGTCTTTCTAG-TCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTA 178035 || ||||| | |||| || |||||||||| || || |||| ||||||||| || | Sbjct 858 TGT-TTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAA 800 Query 178036 TCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACC 178095 ||||||||||||| |||| |||| |||||||||| || || ||||| ||||||||||||| Sbjct 799 TCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 740 Query 178096 CGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATG 178155 | || |||||| | || || ||||| |||||||| || || || || ||||||||||| Sbjct 739 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCATG 680 Query 178156 GAAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTATG 178215 | | | || || ||| | || | || || ||||||| ||| || || | | Sbjct 679 GTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 620 Query 178216 GTTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTCG 178275 |||||| |||||| |||||||||||||| ||||| ||||| || || |||||||| || | Sbjct 619 GTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 560 Query 178276 GTCGTTTGATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCG 178335 | || || |||||||||||||| ||||||||||| ||||| | ||||||||||| | Sbjct 559 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAG 500 Query 178336 CAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTA 178395 | || ||||||||||| || |||||||| || || | ||| | ||| ||||| || | Sbjct 499 CTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGGCTTTCA 440 Query 178396 ACCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACA 178455 |||| ||||| ||||| |||||||| || | | || | ||||| ||||| | || | Sbjct 439 ACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATA 380 Query 178456 CATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATA 178515 | ||||| || | | ||||| || || || |||||||| ||||||||| | ||| Sbjct 379 CTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCACGAACGTAAT- 321 Query 178516 GCACATAACTTCCCGCTTGATCTTGCAGCAGCTG 178549 || ||||||||||| || || ||| ||| |||| Sbjct 320 GCTCATAACTTCCCTCTAGA-CTT--AGCTGCTG 290 Score = 562 bits (622), Expect = 4e-155 Identities = 732/1006 (73%), Gaps = 6/1006 (1%) Strand=Plus/Plus Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008 ||||||||||| | |||| || || || ||||| || ||||| || || | || Sbjct 33149 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGTCTATTGCTCT 33208 Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068 |||| ||| ||| | || | || || ||| | || || ||| | ||||| || | Sbjct 33209 TTCCTTGTGCCTATTTCGCTGTAGGAGGCTGGTTCACAGGTACAACCTTTGTAACTTCAT 33268 Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGG-TGCTAACTTTCTTA-CGGCAGC 179126 |||| |||||||| | || ||||||||| | ||||| ||| | ||||||| | || || Sbjct 33269 GGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAA--TTTCTTAACTGCCGC 33326 Query 179127 TGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTC 179186 || || || |||||| || | | | |||||| | | |||| ||||||||||| | Sbjct 33327 AGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTGTGGGGTCCTGAAGC 33386 Query 179187 TCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCA 179246 || ||| |||| || ||||| ||| | || || || |||| ||| || || ||||| Sbjct 33387 ACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCCCTCCA 33446 Query 179247 CGGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCG 179305 ||||| |||| ||||| || |||||| | ||||| || ||||| || || ||| || Sbjct 33447 TGGTGCTTTCGGACTAATAGGCTTCATGTTACGTCAATTCGAACTTGCTCGATCTGTTCA 33506 Query 179306 GTATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTAT 179365 | | || ||||| ||||| || || ||| ||||||| ||||| || || ||| ||||| Sbjct 33507 AT-TGCGACCTTATAATGCAATCGCGTTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTAT 33565 Query 179366 TTCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGG 179425 | || || || ||||| |||||||| ||||||||||||||||| |||||||| || | Sbjct 33566 TCCTGATTTATCCACTAGGACAATCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCAG 33625 Query 179426 CGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTTC 179485 | || ||| ||||| | || || || ||||| || || || |||||| | ||||| |||| Sbjct 33626 CTATATTTCGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACATTAAACCCATTTC 33685 Query 179486 ACATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAA 179545 | ||||||||||||||||| | |||| | |||| |||| | ||||||||||| | | Sbjct 33686 ATATGATGGGAGTTGCAGGGGTATTGGGCGCTGCTTTGCTATGCGCTATTCATGGTGCTA 33745 Query 179546 CTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGACT 179605 ||||||| ||||| || | ||||||||| || ||||| ||||| || || || Sbjct 33746 CTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACC 33805 Query 179606 CTACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCT 179665 | || |||| || || || ||||| ||||| || |||||||| |||||||| || |||| Sbjct 33806 CAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCGAACCGCTTTTGGTCCCAAATCT 33865 Query 179666 TCGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCA 179725 | |||||| | ||| |||||| |||||||| || ||||||| | | ||||| || || | Sbjct 33866 TTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAA 33925 Query 179726 TGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATG 179785 ||| | ||| | | || |||| | |||| || || || || || || || |||| Sbjct 33926 CTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTGCGCGCCTATG 33985 Query 179786 ATTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAA 179845 | || || ||| || || | || |||||||||||||| || ||||| ||||| |||| Sbjct 33986 ACTTCGTTTCTCAGGAAATTCGCGCGGCAGAAGATCCTGAATTTGAGACTTTCTACACAA 34045 Query 179846 AGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATG 179905 | || ||||| | || ||||| | ||||||||| |||| || ||||| || |||| Sbjct 34046 AAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATG 34105 Query 179906 AAAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951 ||||| | || ||||| || || || ||||| |||| ||||| || Sbjct 34106 AAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 34151 >seq6 Length=36610139 Score = 403 bits (446), Expect = 2e-107 Identities = 454/604 (75%), Gaps = 3/604 (0%) Strand=Plus/Plus Query 177897 GAGTGGGAACTTTCATACCGTCTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCA 177956 ||| |||| ||| | ||||||||||||||| || ||||| ||||||||| || || Sbjct 34152490 GAGAGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCT 34152549 Query 177957 CCTGTTGCAGCAGCATCCGCAGTCTTTCTAG-TCTATCCTTTCGGTCAAGGTTCATTCTC 178015 ||||||||||| || | || || ||||| | |||| || |||||||||| || || Sbjct 34152550 CCTGTTGCAGCTGCTACTGCTGT-TTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTC 34152608 Query 178016 CGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGA 178075 |||| ||||||||| || |||||||||||||| |||| |||| |||||||||| || || Sbjct 34152609 TGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGA 34152668 Query 178076 ACACAATATCCTTATGCACCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATC 178135 ||||| |||||||||||||| || |||||| | || || ||||| |||||||| || || Sbjct 34152669 GCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTC 34152728 Query 178136 TCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGA 178195 || || |||||||||||| | | || || ||| | || | || || ||||| Sbjct 34152729 CCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGA 34152788 Query 178196 AACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGT 178255 || ||| || || | ||||||| |||||| |||||||||||||| ||||| ||||| Sbjct 34152789 AAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGT 34152848 Query 178256 CGCAGCCCATGGTTACTTCGGT-CGTTTGATCTTCCAATATGCATCGTTCAACAACTCCC 178314 || || |||||||| || ||| || || |||||||||||||| ||||||||||| | Sbjct 34152849 AGCCGCTCATGGTTATTTTGGTCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTC 34152908 Query 178315 GTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTG 178374 |||| | ||||||||||| || || ||||||||||| || |||||||| || || | | Sbjct 34152909 GTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAG 34152968 Query 178375 GTGTATCCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACG 178434 || | ||| ||||| || ||||| ||||| ||||| |||||||| || | | || Sbjct 34152969 GTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATA 34153028 Query 178435 GACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGG 178494 | ||||| ||||| | || || ||||| || | | ||||| || || || |||| Sbjct 34153029 GTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGG 34153088 Query 178495 AAGT 178498 | || Sbjct 34153089 AGGT 34153092 >seq8 Length=31745509 Score = 361 bits (400), Expect = 7e-95 Identities = 362/467 (78%), Gaps = 2/467 (0%) Strand=Plus/Plus Query 177885 TATATGGGACGTGAGTGGGAACTTTCATACCGTCTAGGTATGCGCCCCTGGATCTGTGTT 177944 || ||||| ||||||||||| ||| | ||||||||||||||| || ||||| |||| Sbjct 5168713 TACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTT 5168772 Query 177945 GCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTAG-TCTATCCTTTCGGTCA 178003 ||||| || || ||||||||||| || | || || ||||| | |||| || ||||||| Sbjct 5168773 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTTGATCTACCCAATCGGTCA 5168831 Query 178004 AGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 178063 ||| || || |||| ||||||||| || |||||||||||||| |||| |||| |||| Sbjct 5168832 AGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 5168891 Query 178064 ATTCCAAGCAGAACACAATATCCTTATGCACCCGTTCCACATGCTCGGTGTTGCTGGGGT 178123 |||||| || || ||||| |||||||||||||| || |||||| | || || ||||| || Sbjct 5168892 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGT 5168951 Query 178124 ATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCTTCGCTCGTCCG 178183 |||||| || || || || |||||||||||| | | || || ||| | || | Sbjct 5168952 ATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAG 5169011 Query 178184 TGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAAC 178243 || || ||||||| ||| || || | ||||||| |||||| |||||||||||||| Sbjct 5169012 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAAC 5169071 Query 178244 ATATAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCGTT 178303 ||||| ||||| || || |||||||| || || || || |||||||||||||| || Sbjct 5169072 TTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTT 5169131 Query 178304 CAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAG 178350 ||||||||| ||||| | ||||||||||| || || |||||||||| Sbjct 5169132 CAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAG 5169178 >seq36 Length=917149 Score = 134 bits (148), Expect = 2e-26 Identities = 191/266 (72%), Gaps = 2/266 (1%) Strand=Plus/Minus Query 177579 ACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCA 177638 ||| | ||||| || || | || ||||| || || ||||||| || ||| | ||| | Sbjct 329976 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 329917 Query 177639 GCAACTATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCCCCCCGTGGACATCGACGGCAT 177697 |||||| |||| || || |||||||| | || ||| || || || || || || || Sbjct 329916 GCAACT-TCTGTATTTATTATCGCCTTCATTGCCATTCCTCCAGTAGATATTGATGGTAT 329858 Query 177698 CCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGT 177757 |||||||| || | || || || | ||||| ||||| || || || ||||| || | Sbjct 329857 TCGTGAACCTGTTTCAGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGCCATTAT 329798 Query 177758 ACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGA 177817 || |||| || || ||| | ||||| ||||| ||||||||||| || || |||| Sbjct 329797 TCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAATCTGGGAAGCGGCTTCTGTTGA 329738 Query 177818 TGAGTGGCTGTATAACGGTGGTCCTT 177843 ||| ||| | || ||||||||||||| Sbjct 329737 TGAATGGTTATACAACGGTGGTCCTT 329712 >seq3 Length=50312079 Score = 129 bits (142), Expect = 7e-25 Identities = 153/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 138529 GATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGT 138588 |||||| |||||||| ||||||||||| || |||||| | || ||||| || || || Sbjct 21245175 GATGATTGCTACATCCTAGATGCTGCTGAGGAGGCAGGTGTGGAGCTTCCATATTCTTGC 21245116 Query 138589 CGTGCTGGTGCATGTTCTACCTGTGCTGGTAA-ATTAGTTGAAGGAACTGTAGATCAGTC 138647 | || |||||||| |||||||||||||| || |||| ||||||| | || || ||| | Sbjct 21245115 AGGGCAGGTGCATGCTCTACCTGTGCTGGAAAGATTA-TTGAAGGCTCCGTTGACCAGGC 21245057 Query 138648 TGACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGC 138707 ||| || ||||||||||| | ||||| | || || | | | |||||||| | Sbjct 21245056 TGATGGATCGTTCCTTGATGACAAACAAATGGGAGAGGGTTACTTGCTTACTTGCGTGTC 21244997 Query 138708 ATACCCCACATCCGATTGTATAATT 138732 ||||| | |||||||||| | ||| Sbjct 21244996 CTACCCGAAATCCGATTGTGTGATT 21244972 Score = 116 bits (128), Expect = 4e-21 Identities = 172/244 (70%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 138517 TTTGACTGTGCTGATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTT 138576 ||||| |||||||||| |||||||| |||||||| || || || || | || || Sbjct 44684224 TTTGAGGCTGCTGATGATTGCTACATCCTGGATGCTGCAGAGGAGGCTGGAGTGGAACTC 44684283 Query 138577 CCCTACTCCTGTCGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACT 138636 || || || || | || ||||| || |||||||||||||| || | |||||||| || Sbjct 44684284 CCATATTCTTGCAGGGCAGGTGCCTGCTCTACCTGTGCTGGGAAGATCGTTGAAGGCTCT 44684343 Query 138637 GTAGATCAGTCTGACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATG 138696 || || ||| |||| || ||||| |||||| ||||||| | || || | | | Sbjct 44684344 GTTGACCAGGCTGATGGATCCTTCCTAGATGATAACCAAATGGGAGAGGGTTACTTGCTA 44684403 Query 138697 ACTTGCGTAGCATACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACTA 138756 || ||||| | ||||| | | | |||||| | ||| | || | || || | ||| || Sbjct 44684404 ACCTGCGTCTCCTACCCGAAAGCTGATTGTGTCATTCACACCCACAAGGAAGGCGATCTT 44684463 Query 138757 TACT 138760 |||| Sbjct 44684464 TACT 44684467 Score = 111 bits (122), Expect = 2e-19 Identities = 143/196 (73%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 179756 TTGGGCTAGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAG 179815 |||| ||||| || || || || || ||||| || || |||||| || | || |||| Sbjct 24072548 TTGGTCTAGCCCTGAACCTCCGCGCCTATGACTTCGTTCCTCAAGAAATTCGCGCGGCAG 24072489 Query 179816 AAGATCCTGAGTTCGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTACGTG 179875 |||||||||| || |||| || | ||||| || ||||| | || ||||| | |||| Sbjct 24072488 AAGATCCTGAATTTGAGATTTTTGACACAAA-AATATTCTCTTAAACGAAGGTATTCGTG 24072430 Query 179876 CTTGGTTGGCACCTGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTCCTAC 179935 ||||| |||| || ||||| || ||||||||| | || ||||| || | || |||| Sbjct 24072429 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGGGGTTCTAC 24072370 Query 179936 CTAGTGGTAACGCACT 179951 | |||| ||||| || Sbjct 24072369 CCCGTGGAAACGCTCT 24072354 Score = 100 bits (110), Expect = 3e-16 Identities = 142/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 179756 TTGGGCTAGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAG 179815 |||| ||||| || || | || || ||||| || || ||| | || | || |||| Sbjct 34945760 TTGGTCTAGCCCTGAACCCGCGCGCCTATGACTTCGTTTCTCAGAAAATTCGCGCGGCAG 34945819 Query 179816 AAGATCCTGAGTTCGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTACGTG 179875 |||||||||| || ||||| ||||| ||||| || ||||| | || ||||| | |||| Sbjct 34945820 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 34945879 Query 179876 CTTGGTTGGCACCTGCTGATCAACCACATGAAA-ACTTCATCTTCCCAGAAGAAGTCCTA 179934 ||||| |||| || ||||| | ||||||| |||| || ||||| || || ||| Sbjct 34945880 CTTGGATGGCGGCTCAAGATCAGACTCATGAAAGACTT-ATATTCCCTGAGGAGTATCTA 34945938 Query 179935 CCTAGTGGTAACGCACT 179951 || |||| ||||| || Sbjct 34945939 CCCCGTGGAAACGCTCT 34945955 >seq4826 Length=244980 Score = 123 bits (136), Expect = 3e-23 Identities = 145/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 179756 TTGGGCTAGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAG 179815 |||| || || || || || || || ||||| || || ||| || || | || |||| Sbjct 499 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 440 Query 179816 AAGATCCTGAGTTCGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTACGTG 179875 |||||||||| || ||||| ||||| ||||| || ||||| | || ||||| | |||| Sbjct 439 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 380 Query 179876 CTTGGTTGGCACCTGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTCCTAC 179935 ||||| |||| || ||||| || ||||||||| | || ||||| || || || |||| Sbjct 379 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTAC 320 Query 179936 CTAGTGGTAACGCACT 179951 | |||| ||||| || Sbjct 319 CCCGTGGAAACGCTCT 304 >seq1731 Length=31681 Score = 120 bits (132), Expect = 4e-22 Identities = 144/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 179756 TTGGGCTAGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAG 179815 |||| || || || || || || || ||||| || || ||| || || | || |||| Sbjct 4297 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 4238 Query 179816 AAGATCCTGAGTTCGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTACGTG 179875 |||||||||| || ||||| ||||| ||||| || ||||| | || ||||| | |||| Sbjct 4237 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 4178 Query 179876 CTTGGTTGGCACCTGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTCCTAC 179935 ||||| |||| || ||||| || ||||||| | | || ||||| || || || |||| Sbjct 4177 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAACCCTTATATTCCCTGAGGAGGTTCTAC 4118 Query 179936 CTAGTGGTAACGCACT 179951 | |||| ||||| || Sbjct 4117 CCCGTGGAAACGCTCT 4102 >seq2 Length=43913520 Score = 114 bits (126), Expect = 2e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 138527 CTGATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCT 138586 |||||||| ||||| || ||||||||||| || ||||| ||||| ||||| || |||| Sbjct 22638261 CTGATGATACTTACATTCTAGATGCTGCTGAGGAGGCAGGGATTGAGCTTCCATATTCCT 22638320 Query 138587 GTCGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGT 138646 | | || ||||||||||| |||||||| |||||| | || ||| |||| || |||| Sbjct 22638321 GCAGAGCAGGTGCATGTTCCACCTGTGCCGGTAAAGTGGTGTCGGGAGCTGTTGACCAGT 22638380 Query 138647 CTGACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAG 138706 | || || || || || || ||||||| || ||| | | | |||| || || Sbjct 22638381 CAGATGGATCCTTTCTCGACGAGAACCAAATGAAAGAAGGTTATTTGTTGACCTGTGTCT 22638440 Query 138707 CATACCCCACATCCGATT 138724 | |||||||| | |||| Sbjct 22638441 CGTACCCCACTTGTGATT 22638458 >seq4 Length=35924511 Score = 104 bits (114), Expect = 3e-17 Identities = 174/248 (70%), Gaps = 4/248 (2%) Strand=Plus/Plus Query 178302 TTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGG 178361 ||||||||||| ||||| | ||||||||||| || || ||||||||| | | |||||| Sbjct 4757228 TTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAATAAGTATCTGG 4757287 Query 178362 TTCACCGCACTTGGTGTATCCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAG 178421 || || || | ||| | ||| ||| | || ||||| |||| ||||| |||||||| Sbjct 4757288 TTTACTGCTTTAGGTATCAGCACTATGACTTTCAACCTAAATGATTTCAATTTCAACCAA 4757347 Query 178422 TCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGCC 178481 || | | || | |||| |||| | || || || || || | | ||||| || Sbjct 4757348 TCTGTAGTTGATAGTCAAGCCTGTGTAATTAATACTTGAGCTGATATCATTAACCGCGCT 4757407 Query 178482 GGTCTCGGCATGGAAGTCATGCACGAAAGAAATAGCACATAACTTCCCGCTTGATCTTGC 178541 ||| || | ||||| |||| |||| ||| || ||||||||| | || || ||| Sbjct 4757408 AATCTTGGTAAAGAAGTTATGCTCGAACATAAT-GCTCATAACTTCTCTCTAGA-CTT-- 4757463 Query 178542 AGCAGCTG 178549 ||| |||| Sbjct 4757464 AGCTGCTG 4757471 >seq1 Length=51465339 Score = 96.9 bits (106), Expect = 4e-15 Identities = 148/211 (70%), Gaps = 19/211 (9%) Strand=Plus/Plus Query 178215 GGTTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTC 178274 ||||||| |||||| |||||||||||| | | ||| ||||| | | |||||||| | Sbjct 27733156 GGTTACAGGTTCGGGCAAGAAGAAGAAGCTTGTAATATCGTACCCACTCATGGTTATATT 27733215 Query 178275 GGTCGTTTGATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTC 178334 ||||| || || ||||||| ||| ||||||||||| | ||| | |||||||||| Sbjct 27733216 GGTCGATTAATATTCCAATCTGCTAGTTTCAACAACTCTCATTCTTTACACTTCTTCC-- 27733273 Query 178335 GCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATC--CACCATGGCAT 178392 ||||| | |||||||| | | ||| ||||| ||| ||||| | Sbjct 27733274 -------------TAGTT-GTATCTGGTTTA-CTAGCTTAAGGTATCAGCACTATGGCTT 27733318 Query 178393 TTAACCTCAATGGATTCAACTTCAACCAGTC 178423 | || || ||||| |||| |||||||| || Sbjct 27733319 TCAATCTAAATGGTTTCAGTTTCAACCAATC 27733349 >seq9 Length=33682890 Score = 87.8 bits (96), Expect = 2e-12 Identities = 163/237 (69%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 138517 TTTGACTGTGCTGATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATT-GATCT 138575 || || ||| | || ||| ||||| || || |||||| || ||||| | | ||||| Sbjct 3994388 TTCGAGTGTCCAGAAGATGCATACATTCTCGACCATGCTGAAGA-GCAGGGAATCGATCT 3994446 Query 138576 TCCCTACTCCTGTCGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAAC 138635 ||||||||| || | || || |||| |||| ||| | || ||| | ||| ||| || Sbjct 3994447 TCCCTACTCTTGCAGAGCAGGGTCATGCTCTAGTTGTACCGGGAAAGTTGTTTCAGGCAC 3994506 Query 138636 TGTAGATCAGTCTGACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCAT 138695 | ||||| || |||||| || |||||||||||||| || || || | | | | Sbjct 3994507 ACTGGATCAATCAGACCAGAGCTTTCTTGATGATGACCAGATGAAGGCTGGTTATGTTCT 3994566 Query 138696 GACTTGCGTAGCATACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGA 138752 ||||| || || || || || || ||| | |||| |||| | || ||||| || Sbjct 3994567 CACTTGTGTGGCTTATCCTACCTCTGATGTAACAATTCAAACCCACAAGGAGGAGGA 3994623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605630663126160