Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 3e-11 >seq1 Length=51465339 Score = 84.2 bits (92), Expect = 3e-11 Identities = 141/198 (71%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 193401 GATGGTTGTAGAATAGTTAAAGTT--GTTATTGGTCAGTTACGTATACCTGAAATAGGGG 193458 ||||||| ||| | || ||||| | || | ||||| | | |||||| |||| || | Sbjct 44497820 GATGGTTTAAGATTTGTGAAAGTAAGGGTAA-GATCAGTGAGG-ATACCTCAAATTGGAG 44497877 Query 193459 ATAAATTTTGTTC-AGGAATGGCCCAAAAAGGAACTTGTGGTATGATTTATTCACAAGAA 193517 |||||||| | ||| |||| | | |||||||| ||| |||| ||| |||||||| Sbjct 44497878 ATAAATTTAGCAGTAGGCATGGTC-AGAAAGGAACAGTTGGCATGACTTACACACAAGAA 44497936 Query 193518 GATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTATTAATCCAAATTGTATT 193577 |||||||| | || | |||||| |||||||||||| | |||||| || ||| Sbjct 44497937 GATATGCCTTGGACTGTAGAAGGTATTACCCCAGATATTATTGTGAATCCACATGCCATT 44497996 Query 193578 CCATCCAGAATGACCATT 193595 || || | ||||| ||| Sbjct 44497997 CCGTCTCGGATGACAATT 44498014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635139282911280