Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 143 3e-29 seq7 140 3e-28 seq2 134 1e-26 seq6 116 4e-21 seq3 113 4e-20 >seq1 Length=51465339 Score = 143 bits (158), Expect = 3e-29 Identities = 152/198 (77%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||| || ||||| || ||||| ||| | | || |||||||||||| || || Sbjct 30446257 GTGGATTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGTTTTCCG 30446316 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-TT 133582 ||| | ||||| || ||||||||||||||||||||||| ||||| ||| ||| || || Sbjct 30446317 GCGAAGATGAGGCGTTGCTGGTCGGGAGGGATGCCTTCTTTGTCTTGGAT-TTTGGCTTT 30446375 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||||| || ||||| || | ||||| |||||||||||| || || Sbjct 30446376 GACATTGTCGATGGTGTCGGAGGATTCCACCTCCAGGGTGATGGTTTTGCCGGTGAGGGT 30446435 Query 133643 TTTTACGAAAATCTGCAT 133660 ||||||||| |||||||| Sbjct 30446436 TTTTACGAAGATCTGCAT 30446453 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | || ||||| ||||| |||||||| ||| | | || ||| || || Sbjct 45560538 AAATGGAGAGTTGACTCCTTCTGGATATTGTAGTCGGCAAGGGTCCTGCCGTCTTCAAGT 45560479 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || | || ||||||||| || || ||||||||||| || ||| Sbjct 45560478 TGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCCTGGATT 45560419 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | || | ||||||| | || || || | ||||| ||| || ||| Sbjct 45560418 TTGGCCTTGACGTTGTCGATTGTGTCGGAGCTTTCGACCTCAAGGGTGATGGTCTTTCCG 45560359 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| || || || ||||| Sbjct 45560358 GTGAGGGTTTTCACAAAGATTTGCAT 45560333 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||| ||||| ||||| ||||||||||| | | || ||||| ||| Sbjct 45561678 AAGTGAAGGGTAGACTCCTTCTGGATATTGTAATCTGCAAGGGTCCTTCCATCCTCAAGC 45561619 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || | || |||||| || ||||| || |||||||| || ||| Sbjct 45561618 TGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGAGGAATACCTTCCTTATCCTGAATC 45561559 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | |||| ||||||| | |||||| || | ||||| || || || Sbjct 45561558 TTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCCACTTCCAAGGTGATAGTCTTTCCA 45561499 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||||| || || || |||||||| Sbjct 45561498 GTCAGAGTCTTAACAAAGATCTGCAT 45561473 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAG 133513 ||| | ||| || || ||||| ||||||||||| | | || || | | || || | Sbjct 45561220 ATGAAGGGTTGATTCCTTCTGGATATTGTAATCAGCTAGGGTCCTG--CCA-TCTTCCAA 45561164 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || |||| | || ||||||||| |||||||| ||||||||||| || Sbjct 45561163 CTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGGATCCCTTCCTTGTCCTGAAT 45561104 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | |||| ||||| | | ||| || || | || | || || || Sbjct 45561103 CTTAGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACCTCAAGAGTAATAGTCTTTCC 45561044 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || || || |||||||| Sbjct 45561043 GGTCAAGGTCTTGACAAAGATCTGCAT 45561017 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| |||||||| || || | || | || ||||||||| || || || ||||||||| Sbjct 45560943 TCCTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTG 45560884 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||| || | | ||| || || | ||||| Sbjct 45560883 TCCTGGATCTTGGCCTTGACATTGTCGATCGTATCAGAGCTCTCGACCTCAAGGGTGATT 45560824 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || |||| || || ||||| |||||||| Sbjct 45560823 GTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 45560789 >seq7 Length=36358036 Score = 140 bits (154), Expect = 3e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || ||||| ||| | | || |||||||||||||||||| Sbjct 14364745 GTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTGCCG 14364686 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| ||||||||||| || ||||||||||| ||||| ||||| ||| Sbjct 14364685 GCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCTTTGTCTTGAATCTTGGCTTTG 14364626 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||||| || ||||| || | ||||| ||||||||||| || ||| Sbjct 14364625 ACATTGTCGATTGTGTCGGAGGATTCCACCTCCAGGGTGATAGTTTTGCCGGTGAGGGTT 14364566 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 14364565 TTCACGAAGATCTGCAT 14364549 >seq2 Length=43913520 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || ||||| ||| | | || |||||| |||||||| || Sbjct 31249773 GTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCCAGCTGCTTTCCG 31249714 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| ||||||||||| |||||||||||||| ||||| |||||| |||| Sbjct 31249713 GCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCTTTGTCCTGGATCTTGGCCTTG 31249654 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||| | | ||| || |||| |||| ||| |||||||| || ||| Sbjct 31249653 ACATTGTCGATGGTGTCCGAAGACTCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTT 31249594 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 31249593 TTCACGAAGATCTGCAT 31249577 Score = 114 bits (126), Expect = 1e-20 Identities = 147/200 (74%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAGCTGCTTG 133520 |||||||| ||||| || ||||| || ||| || || | | || ||||||||||| Sbjct 39747318 GTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTCCTG--CCA-TCTTCGAGCTGCTTA 39747262 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| |||| || || ||||| || ||||| |||||||||||||| |||||| Sbjct 39747261 CCAGCGAAAATAAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCT 39747202 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | ||||| | ||||| || | ||||| ||| || ||||||||| Sbjct 39747201 TTGACGTTGTCGATTGTGTCAGAACTTTCCACCTCCAAGGTGATGGTCTTTCCGGTCAGA 39747142 Query 133641 GTTTTTACGAAAATCTGCAT 133660 ||||| || || |||||||| Sbjct 39747141 GTTTTCACAAAGATCTGCAT 39747122 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGG-ACGAGTCCTCGAG 133513 || || | ||||||||| ||||| ||||| ||||| ||| || || | ||||| || Sbjct 39748695 AAGTGAAGGGTGGACTCCTTCTGGATATTATAATCAGCCAGAGTCCTACCA-TCCTCAAG 39748637 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || || | || | || |||||| || ||||| || ||||||||||| ||| Sbjct 39748636 TTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGAGGAATTCCTTCCTTGTCCTGGAT 39748577 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | |||| || || | |||||| || | ||| | || ||||| Sbjct 39748576 CTTCGCCTTAACATTGTCAATGGTATCTGAACTCTCCACCTCTAGGGTTATAGTCTTGCC 39748517 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||||||| || |||||||||||||| Sbjct 39748516 GGTCAGAGTCTTCACGAAAATCTGCAT 39748490 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||||| || ||||| ||||||||||| ||| || ||||||||||||||| || Sbjct 39747547 GGTGGATTCCTTCTGAATATTGTAATCAGCCAGAGTCCTTCCGTCCTCGAGCTGCTTTCC 39747488 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | | ||||||||| || || ||||| ||||| || ||||| ||| Sbjct 39747487 AGCAAAGATCAATCTCTGCTGGTCCGGGGGAATGCCCTCCTTATCCTGAATCTTGGCCTT 39747428 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||| | | ||| || || | |||| || || ||||||| || Sbjct 39747427 GACATTGTCAATTGTGTCTGAGCTCTCGACTTCCAGAGTGATCGTCTTTCCGGTCAACGT 39747368 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 39747367 CTTAACGAAGATCTGCAT 39747350 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/202 (72%), Gaps = 8/202 (4%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAGCTGCTT 133519 ||| ||||| ||||| |||||||| || | | || || | | ||||| | |||||| Sbjct 39748459 GGTAGACTCCTTCTGGATATTGTAGTCTGCAAGGGTCCTG--CCA-TCCTCCAACTGCTT 39748403 Query 133520 GCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG 133579 || || | || | ||||||||||| || |||||||||||||| || ||| ||||| Sbjct 39748402 TCCAGCAAAGATCAAACGCTGCTGGTCTGGTGGGATGCCTTCCTTATC-CTGAATTTTTG 39748344 Query 133580 C-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 | |||| | |||| ||||| | | ||| || || | ||||| || || || |||| Sbjct 39748343 CTTTGACGTTGTCAATAGTGTCAGAGCTCTCAACTTCAAGGGTGATTGTCTTCCCAGTCA 39748284 Query 133639 GAGTTTTTACGAAAATCTGCAT 133660 | || || || || |||||||| Sbjct 39748283 GGGTCTTGACAAAGATCTGCAT 39748262 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || || |||||||| || |||||||| | | || |||||| |||||||| || Sbjct 39747774 GTTGATTCTTTCTGAATGTTGTAATCAGCTAGGGTTCTTCCGTCCTCAAGCTGCTTACCA 39747715 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | ||||||| ||||||||| || ||||| |||||||| || |||||| || Sbjct 39747714 GCAAAGATGAGCCTCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTTAGCTTTC 39747655 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| || || | | ||| || || | ||| | || || || |||| || Sbjct 39747654 ACATTGTCAATAGTATCCGAGCTCTCAACCTCAAGGGTAATAGTCTTTCCTGTCAAGGTC 39747595 Query 133644 TTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 39747594 TTGACGAAAATCTGCAT 39747578 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/200 (70%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAGCTGCTTG 133520 || ||||||||||| || ||||| || | | || || | | ||||| || ||||| Sbjct 39748002 GTTGACTCTTTCTGAATGTTGTAGTCTGCAAGAGTCCTG--CCA-TCCTCCAGTTGCTTA 39747946 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || | || ||||||||| || || || ||||||||||| |||||| Sbjct 39747945 CCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTAGCT 39747886 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | |||| ||| || | | ||| || || | ||| | || ||||| |||| Sbjct 39747885 TTCACATTGTCAATCGTATCCGAGCTCTCAACCTCCAGGGTAATAGTCTTGCCTGTCAAG 39747826 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || || || ||||||||||| Sbjct 39747825 GTCTTGACAAAAATCTGCAT 39747806 >seq6 Length=36610139 Score = 116 bits (128), Expect = 4e-21 Identities = 151/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| || ||||| ||||||||||| | | || ||| | ||||| |||| Sbjct 34406963 ATGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCTAATGTACGACCA-TCCTCAAGCT 34406905 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||||||| | || |||| |||||| || ||||| |||||||||||||| |||| Sbjct 34406904 GTTTGCCCGCGAAGATAAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGAATCT 34406845 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | |||| ||||| | | || || || | ||| | ||| ||||| | Sbjct 34406844 TAGCCTTAACATTGTCAATGGTGTCAGAGCTTTCAACTTCTAAGGTAATGGTCTTGCCAG 34406785 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 | || ||||| || || ||||||||| Sbjct 34406784 TGAGTGTTTTAACAAAGATCTGCATG 34406759 Score = 114 bits (126), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | |||||| || ||||| ||||||||||| | | ||| ||| | ||||| || Sbjct 34079103 AAATGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCTAAGGTGCGACCA-TCCTCAAG 34079045 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || || | || |||| |||||| || |||||||| ||||||||||| || Sbjct 34079044 CTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGAGGGATACCTTCCTTGTCTTGAAT 34078985 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | |||| ||||| | | || || || | |||| ||| || || Sbjct 34078984 CTTAGCCTTGACATTGTCAATGGTGTCTGAGCTTTCTACCTCAAGAGTGATGGTCTTCCC 34078925 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||||| || || || |||||||| Sbjct 34078924 GGTAAGAGTCTTCACAAAGATCTGCAT 34078898 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | |||||| || ||||| ||||| || || | | || ||||||||| Sbjct 34406737 AAATGAAGGGTGGATTCCTTCTGAATATTATAGTCAGCTAAAGTCCTTCCATCCTCGAGC 34406678 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || |||||||| | || |||| |||||| ||||||||||||||||||||||| ||| Sbjct 34406677 TGTTTGCCCGCAAAGATAAGCCTCTGCTGATCGGGAGGGATGCCTTCCTTGTCTTGAATC 34406618 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | || | ||||| | | || || || | ||| | ||| || ||| Sbjct 34406617 TTAGCCTTGACATTGTCGATTGTGTCAGAGCTTTCAACCTCAAGGGTTATGGTCTTTCCG 34406558 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || |||||||| || || |||||||| Sbjct 34406557 GTAAGAGTTTTCACAAAGATCTGCAT 34406532 Score = 111 bits (122), Expect = 2e-19 Identities = 151/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| || || ||||| |||||||| || | | ||| ||| ||| || || Sbjct 34079331 AAATGAAGGGTTGATTCCTTCTGGATATTGTAGTCAGCAAGGGTGCGACC-GTCTTCCAG 34079273 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || ||||||| | ||||||||| || |||||||| |||||||| ||| Sbjct 34079272 CTGCTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGAT 34079213 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| |||| | |||| ||||| | | || || || | ||||| || ||||| Sbjct 34079212 CTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCAACTTCTAGGGTGATTGTCTTGCC 34079153 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || || || || ||||||||| Sbjct 34079152 AGTAAGTGTCTTAACAAATATCTGCATG 34079125 Score = 105 bits (116), Expect = 6e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAG 133513 ||||| | ||| || || ||||| ||||||||||| | | || ||| | ||||| || Sbjct 34641551 AAATGAAGGGTCGATTCCTTCTGAATATTGTAATCAGCTAAGGTACGACCA-TCCTCAAG 34641493 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || || | ||||||| |||||| || |||||||| ||||| ||||| || Sbjct 34641492 CTGTTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAGGGATACCTTCTTTGTCTTGAAT 34641433 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | |||| ||||| | | || || || | |||| ||| || || Sbjct 34641432 CTTAGCCTTGACATTGTCAATGGTGTCCGAGCTTTCTACCTCAAGAGTGATGGTCTTCCC 34641373 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || |||||||| || || |||||||| Sbjct 34641372 AGTAAGAGTTTTCACAAAGATCTGCAT 34641346 Score = 105 bits (116), Expect = 6e-18 Identities = 152/209 (73%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| || || ||||| || ||||| || | | ||| ||| ||| || || Sbjct 34641779 AAATGAAGGGTCGATTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACC-GTCTTCCAG 34641721 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || ||||||| | ||||||||| || |||||||| |||||||| ||| Sbjct 34641720 CTGCTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGAT 34641661 Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 | || |||| | | | |||| ||||| | | || || || | ||||| ||| || | Sbjct 34641660 C-TTAGCTTTAACATTATCAATAGTGTCAGAGCTTTCAACTTCTAGGGTGATGGTCTTTC 34641602 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661 | || || || || || || ||||||||| Sbjct 34641601 CAGTAAGTGTCTTAACAAAGATCTGCATG 34641573 Score = 102 bits (112), Expect = 8e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| |||||||| || |||||||| || | | ||| | | | || || || | Sbjct 34079785 ATGGAGGGTAGACTCTTTTTGAATATTGTAGTCTGCAAGTGTGCGGCCA-TCTTCAAGTT 34079727 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | || || || | || |||| ||||||||| || |||||||| || ||||| |||| Sbjct 34079726 GTTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGAATCT 34079667 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 || |||| | |||| ||||||| | |||||| || | |||| ||| || || | Sbjct 34079666 TTGCTTTGACATTATCAATAGTGTCGGAGCTCTCCACCTCTAGCGTGATGGTCTTTCCTG 34079607 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||| || || ||||||||||| Sbjct 34079606 TCAAAGTCTTCACAAAAATCTGCAT 34079582 Score = 100 bits (110), Expect = 3e-16 Identities = 150/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| || |||||||| |||||||| || | | || ||| | ||||| || Sbjct 34407649 AAGTGGAGGGTAGATTCTTTCTGAATATTGTAGTCAGCAAGGGTACGACCA-TCCTCAAG 34407591 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || |||| |||| ||||||||| || ||||||||||| || || ||| Sbjct 34407590 CTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGGATGCCTTCTTTATCC-TGAA 34407532 Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||||| || | | |||| ||||| | | |||||| || | || | || || | Sbjct 34407531 TTTTTGCCTTCACATTATCAATTGTGTCTGAGCTCTCCACCTCCAAAGTAATTGTCTTTC 34407472 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | |||| || || || ||||||||||| Sbjct 34407471 CTGTCAATGTCTTCACAAAAATCTGCAT 34407444 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||||| || ||||| ||||||||||| ||| || ||||| | | Sbjct 34407421 AAATGGAGTGTGGATTCCTTCTGAATATTGTAATCAGCCAATGTCCTTCCATCCTCCAAC 34407362 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| || |||| | || ||||||||| || ||||| ||||||||||| ||| Sbjct 34407361 TGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCTTGGATT 34407302 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 ||| ||| | | |||| || || | || || || | ||||| || || || Sbjct 34407301 TTTGCCTTCACATTGTCAATTGTATCCGAACTTTCTACTTCAAGGGTGATTGTCTTCCCT 34407242 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || || || ||||| Sbjct 34407241 GTGAGGGTCTTGACAAAGATTTGCAT 34407216 >seq3 Length=50312079 Score = 113 bits (124), Expect = 4e-20 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| || || |||||||| ||| ||| ||| | | | ||||| |||| Sbjct 6144155 ATGAAGGGTAGACTCCTTTTGAATATTGTAGTCGGCCAGTGTGCGGCCA-TCCTCCAGCT 6144097 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || | || |||| ||||||||| || ||||||||||||||||| |||| Sbjct 6144096 GCTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGAATCT 6144037 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 || || | | |||| ||||| | | ||| || || | |||| || || || | Sbjct 6144036 TTGCTTTCACATTATCAATGGTGTCTGAGCTCTCAACCTCAAGTGTGATAGTCTTCCCAG 6143977 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 ||||||| || || || ||||||||| Sbjct 6143976 TCAGAGTCTTCACAAATATCTGCATG 6143951 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| ||||| ||||| || |||||||| | | || | | | ||||| || Sbjct 6143245 AAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGCTAAGGTCCGTCCA-TCCTCTAG 6143187 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || | ||||||| |||||| || |||||||| ||||||||||| || Sbjct 6143186 CTGCTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAGGGATACCTTCCTTGTCTTGAAT 6143127 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| |||| | |||| ||||| | || || |||| ||||| || ||||| Sbjct 6143126 CTTCGCTTTGACATTGTCAATAGTGTCCGAACTTTCAACCTCGAGGGTGATTGTCTTGCC 6143067 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || |||||||| || || |||||||| Sbjct 6143066 AGTAAGAGTTTTCACAAATATCTGCAT 6143040 Score = 105 bits (116), Expect = 6e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| ||||| ||||| || ||||||||| ||| || | | | ||||| || Sbjct 6143473 AAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCGGCCAAGGTCCGTCCA-TCCTCTAG 6143415 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || || | ||||||| ||||||||| || ||||| || |||||||| ||| Sbjct 6143414 CTGTTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGAT 6143355 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| |||| | |||| || || | | || || || | |||| || ||||| Sbjct 6143354 CTTAGCTTTGACATTATCAATGGTATCAGAGCTTTCGACTTCTAGAGTGATAGTCTTGCC 6143295 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || ||||| ||||||||||| Sbjct 6143294 AGTAAGTGTCTTTACAAAAATCTGCAT 6143268 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||| || || ||||| || || || || | | || | || |||||| Sbjct 6143701 AAATGGAGGGTTGATTCCTTCTGGATGTTATAGTCAGCAAGGGTACGCCCATCTTCGAGC 6143642 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| || ||||||||| ||||||||| || ||||| || |||||||| |||| Sbjct 6143641 TGCTTGCCAGCAAAAATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATC 6143582 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || |||| | |||| || || | || || || | |||| || || ||| Sbjct 6143581 TTAGCTTTGACATTATCAATAGTATCAGAACTTTCAACTTCTAGAGTGATAGTCTTTCCG 6143522 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || ||||||||||||||||| Sbjct 6143521 GTAAGGGTCTTTACGAAAATCTGCAT 6143496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483391637640240