Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20
2016-05-24] 4,826 sequences; 421,502,825 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq1 143 3e-29
seq7 140 3e-28
seq2 134 1e-26
seq6 116 4e-21
seq3 113 4e-20
>seq1
Length=51465339
Score = 143 bits (158), Expect = 3e-29
Identities = 152/198 (77%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
||||| || ||||| || ||||| ||| | | || |||||||||||| || ||
Sbjct 30446257 GTGGATTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGTTTTCCG 30446316
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-TT 133582
||| | ||||| || ||||||||||||||||||||||| ||||| ||| ||| || ||
Sbjct 30446317 GCGAAGATGAGGCGTTGCTGGTCGGGAGGGATGCCTTCTTTGTCTTGGAT-TTTGGCTTT 30446375
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | ||||||| || ||||| || | ||||| |||||||||||| || ||
Sbjct 30446376 GACATTGTCGATGGTGTCGGAGGATTCCACCTCCAGGGTGATGGTTTTGCCGGTGAGGGT 30446435
Query 133643 TTTTACGAAAATCTGCAT 133660
||||||||| ||||||||
Sbjct 30446436 TTTTACGAAGATCTGCAT 30446453
Score = 96.9 bits (106), Expect = 3e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||| | || ||||| ||||| |||||||| ||| | | || ||| || ||
Sbjct 45560538 AAATGGAGAGTTGACTCCTTCTGGATATTGTAGTCGGCAAGGGTCCTGCCGTCTTCAAGT 45560479
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| ||| | || | || ||||||||| || || ||||||||||| || |||
Sbjct 45560478 TGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCCTGGATT 45560419
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||||| | || | ||||||| | || || || | ||||| ||| || |||
Sbjct 45560418 TTGGCCTTGACGTTGTCGATTGTGTCGGAGCTTTCGACCTCAAGGGTGATGGTCTTTCCG 45560359
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || ||||| || || || |||||
Sbjct 45560358 GTGAGGGTTTTCACAAAGATTTGCAT 45560333
Score = 96.9 bits (106), Expect = 3e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
|| || | ||| ||||| ||||| ||||||||||| | | || ||||| |||
Sbjct 45561678 AAGTGAAGGGTAGACTCCTTCTGGATATTGTAATCTGCAAGGGTCCTTCCATCCTCAAGC 45561619
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| || || | || | || |||||| || ||||| || |||||||| || |||
Sbjct 45561618 TGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGAGGAATACCTTCCTTATCCTGAATC 45561559
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||| | | |||| ||||||| | |||||| || | ||||| || || ||
Sbjct 45561558 TTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCCACTTCCAAGGTGATAGTCTTTCCA 45561499
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|||||||| || || || ||||||||
Sbjct 45561498 GTCAGAGTCTTAACAAAGATCTGCAT 45561473
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/207 (71%), Gaps = 6/207 (3%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAG 133513
||| | ||| || || ||||| ||||||||||| | | || || | | || || |
Sbjct 45561220 ATGAAGGGTTGATTCCTTCTGGATATTGTAATCAGCTAGGGTCCTG--CCA-TCTTCCAA 45561164
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| || |||| | || ||||||||| |||||||| ||||||||||| ||
Sbjct 45561163 CTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGGATCCCTTCCTTGTCCTGAAT 45561104
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | |||| ||||| | | ||| || || | || | || || ||
Sbjct 45561103 CTTAGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACCTCAAGAGTAATAGTCTTTCC 45561044
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || || || ||||||||
Sbjct 45561043 GGTCAAGGTCTTGACAAAGATCTGCAT 45561017
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||| |||||||| || || | || | || ||||||||| || || || |||||||||
Sbjct 45560943 TCCTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTG 45560884
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | ||| || | | ||| || || | |||||
Sbjct 45560883 TCCTGGATCTTGGCCTTGACATTGTCGATCGTATCAGAGCTCTCGACCTCAAGGGTGATT 45560824
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || |||| || || ||||| ||||||||
Sbjct 45560823 GTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 45560789
>seq7
Length=36358036
Score = 140 bits (154), Expect = 3e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||| ||||| || ||||| ||| | | || ||||||||||||||||||
Sbjct 14364745 GTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTGCCG 14364686
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | ||||| ||||||||||| || ||||||||||| ||||| ||||| |||
Sbjct 14364685 GCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCTTTGTCTTGAATCTTGGCTTTG 14364626
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | || | ||||||| || ||||| || | ||||| ||||||||||| || |||
Sbjct 14364625 ACATTGTCGATTGTGTCGGAGGATTCCACCTCCAGGGTGATAGTTTTGCCGGTGAGGGTT 14364566
Query 133644 TTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 14364565 TTCACGAAGATCTGCAT 14364549
>seq2
Length=43913520
Score = 134 bits (148), Expect = 1e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||| ||||| || ||||| ||| | | || |||||| |||||||| ||
Sbjct 31249773 GTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCCAGCTGCTTTCCG 31249714
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | ||||| ||||||||||| |||||||||||||| ||||| |||||| ||||
Sbjct 31249713 GCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCTTTGTCCTGGATCTTGGCCTTG 31249654
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | || | ||||| | | ||| || |||| |||| ||| |||||||| || |||
Sbjct 31249653 ACATTGTCGATGGTGTCCGAAGACTCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTT 31249594
Query 133644 TTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 31249593 TTCACGAAGATCTGCAT 31249577
Score = 114 bits (126), Expect = 1e-20
Identities = 147/200 (74%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAGCTGCTTG 133520
|||||||| ||||| || ||||| || ||| || || | | || |||||||||||
Sbjct 39747318 GTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTCCTG--CCA-TCTTCGAGCTGCTTA 39747262
Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580
|| ||| |||| || || ||||| || ||||| |||||||||||||| ||||||
Sbjct 39747261 CCAGCGAAAATAAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCT 39747202
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
|||| | || | ||||| | ||||| || | ||||| ||| || |||||||||
Sbjct 39747201 TTGACGTTGTCGATTGTGTCAGAACTTTCCACCTCCAAGGTGATGGTCTTTCCGGTCAGA 39747142
Query 133641 GTTTTTACGAAAATCTGCAT 133660
||||| || || ||||||||
Sbjct 39747141 GTTTTCACAAAGATCTGCAT 39747122
Score = 109 bits (120), Expect = 5e-19
Identities = 150/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGG-ACGAGTCCTCGAG 133513
|| || | ||||||||| ||||| ||||| ||||| ||| || || | ||||| ||
Sbjct 39748695 AAGTGAAGGGTGGACTCCTTCTGGATATTATAATCAGCCAGAGTCCTACCA-TCCTCAAG 39748637
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||| || || | || | || |||||| || ||||| || ||||||||||| |||
Sbjct 39748636 TTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGAGGAATTCCTTCCTTGTCCTGGAT 39748577
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | |||| || || | |||||| || | ||| | || |||||
Sbjct 39748576 CTTCGCCTTAACATTGTCAATGGTATCTGAACTCTCCACCTCTAGGGTTATAGTCTTGCC 39748517
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||||||| || ||||||||||||||
Sbjct 39748516 GGTCAGAGTCTTCACGAAAATCTGCAT 39748490
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
|||||| || ||||| ||||||||||| ||| || ||||||||||||||| ||
Sbjct 39747547 GGTGGATTCCTTCTGAATATTGTAATCAGCCAGAGTCCTTCCGTCCTCGAGCTGCTTTCC 39747488
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | | ||||||||| || || ||||| ||||| || ||||| |||
Sbjct 39747487 AGCAAAGATCAATCTCTGCTGGTCCGGGGGAATGCCCTCCTTATCCTGAATCTTGGCCTT 39747428
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | |||| ||||| | | ||| || || | |||| || || ||||||| ||
Sbjct 39747427 GACATTGTCAATTGTGTCTGAGCTCTCGACTTCCAGAGTGATCGTCTTTCCGGTCAACGT 39747368
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 39747367 CTTAACGAAGATCTGCAT 39747350
Score = 93.3 bits (102), Expect = 4e-14
Identities = 145/202 (72%), Gaps = 8/202 (4%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAGCTGCTT 133519
||| ||||| ||||| |||||||| || | | || || | | ||||| | ||||||
Sbjct 39748459 GGTAGACTCCTTCTGGATATTGTAGTCTGCAAGGGTCCTG--CCA-TCCTCCAACTGCTT 39748403
Query 133520 GCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG 133579
|| || | || | ||||||||||| || |||||||||||||| || ||| |||||
Sbjct 39748402 TCCAGCAAAGATCAAACGCTGCTGGTCTGGTGGGATGCCTTCCTTATC-CTGAATTTTTG 39748344
Query 133580 C-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638
| |||| | |||| ||||| | | ||| || || | ||||| || || || ||||
Sbjct 39748343 CTTTGACGTTGTCAATAGTGTCAGAGCTCTCAACTTCAAGGGTGATTGTCTTCCCAGTCA 39748284
Query 133639 GAGTTTTTACGAAAATCTGCAT 133660
| || || || || ||||||||
Sbjct 39748283 GGGTCTTGACAAAGATCTGCAT 39748262
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| || |||||||| || |||||||| | | || |||||| |||||||| ||
Sbjct 39747774 GTTGATTCTTTCTGAATGTTGTAATCAGCTAGGGTTCTTCCGTCCTCAAGCTGCTTACCA 39747715
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
|| | ||||||| ||||||||| || ||||| |||||||| || |||||| ||
Sbjct 39747714 GCAAAGATGAGCCTCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTTAGCTTTC 39747655
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | |||| || || | | ||| || || | ||| | || || || |||| ||
Sbjct 39747654 ACATTGTCAATAGTATCCGAGCTCTCAACCTCAAGGGTAATAGTCTTTCCTGTCAAGGTC 39747595
Query 133644 TTTACGAAAATCTGCAT 133660
|| ||||||||||||||
Sbjct 39747594 TTGACGAAAATCTGCAT 39747578
Score = 82.4 bits (90), Expect = 7e-11
Identities = 140/200 (70%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAGCTGCTTG 133520
|| ||||||||||| || ||||| || | | || || | | ||||| || |||||
Sbjct 39748002 GTTGACTCTTTCTGAATGTTGTAGTCTGCAAGAGTCCTG--CCA-TCCTCCAGTTGCTTA 39747946
Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580
|| ||| | || | || ||||||||| || || || ||||||||||| ||||||
Sbjct 39747945 CCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTAGCT 39747886
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
|| | | |||| ||| || | | ||| || || | ||| | || ||||| ||||
Sbjct 39747885 TTCACATTGTCAATCGTATCCGAGCTCTCAACCTCCAGGGTAATAGTCTTGCCTGTCAAG 39747826
Query 133641 GTTTTTACGAAAATCTGCAT 133660
|| || || |||||||||||
Sbjct 39747825 GTCTTGACAAAAATCTGCAT 39747806
>seq6
Length=36610139
Score = 116 bits (128), Expect = 4e-21
Identities = 151/206 (73%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | |||||| || ||||| ||||||||||| | | || ||| | ||||| ||||
Sbjct 34406963 ATGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCTAATGTACGACCA-TCCTCAAGCT 34406905
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
| ||||||||| | || |||| |||||| || ||||| |||||||||||||| ||||
Sbjct 34406904 GTTTGCCCGCGAAGATAAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGAATCT 34406845
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | |||| ||||| | | || || || | ||| | ||| ||||| |
Sbjct 34406844 TAGCCTTAACATTGTCAATGGTGTCAGAGCTTTCAACTTCTAAGGTAATGGTCTTGCCAG 34406785
Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661
| || ||||| || || |||||||||
Sbjct 34406784 TGAGTGTTTTAACAAAGATCTGCATG 34406759
Score = 114 bits (126), Expect = 1e-20
Identities = 151/207 (73%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | |||||| || ||||| ||||||||||| | | ||| ||| | ||||| ||
Sbjct 34079103 AAATGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCTAAGGTGCGACCA-TCCTCAAG 34079045
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||| || || || | || |||| |||||| || |||||||| ||||||||||| ||
Sbjct 34079044 CTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGAGGGATACCTTCCTTGTCTTGAAT 34078985
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | |||| ||||| | | || || || | |||| ||| || ||
Sbjct 34078984 CTTAGCCTTGACATTGTCAATGGTGTCTGAGCTTTCTACCTCAAGAGTGATGGTCTTCCC 34078925
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||| ||||| || || || ||||||||
Sbjct 34078924 GGTAAGAGTCTTCACAAAGATCTGCAT 34078898
Score = 114 bits (126), Expect = 1e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||| | |||||| || ||||| ||||| || || | | || |||||||||
Sbjct 34406737 AAATGAAGGGTGGATTCCTTCTGAATATTATAGTCAGCTAAAGTCCTTCCATCCTCGAGC 34406678
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|| |||||||| | || |||| |||||| ||||||||||||||||||||||| |||
Sbjct 34406677 TGTTTGCCCGCAAAGATAAGCCTCTGCTGATCGGGAGGGATGCCTTCCTTGTCTTGAATC 34406618
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||||| | || | ||||| | | || || || | ||| | ||| || |||
Sbjct 34406617 TTAGCCTTGACATTGTCGATTGTGTCAGAGCTTTCAACCTCAAGGGTTATGGTCTTTCCG 34406558
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|| |||||||| || || ||||||||
Sbjct 34406557 GTAAGAGTTTTCACAAAGATCTGCAT 34406532
Score = 111 bits (122), Expect = 2e-19
Identities = 151/208 (73%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | ||| || || ||||| |||||||| || | | ||| ||| ||| || ||
Sbjct 34079331 AAATGAAGGGTTGATTCCTTCTGGATATTGTAGTCAGCAAGGGTGCGACC-GTCTTCCAG 34079273
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| || ||||||| | ||||||||| || |||||||| |||||||| |||
Sbjct 34079272 CTGCTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGAT 34079213
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| |||| | |||| ||||| | | || || || | ||||| || |||||
Sbjct 34079212 CTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCAACTTCTAGGGTGATTGTCTTGCC 34079153
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661
|| || || || || || |||||||||
Sbjct 34079152 AGTAAGTGTCTTAACAAATATCTGCATG 34079125
Score = 105 bits (116), Expect = 6e-18
Identities = 149/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAG 133513
||||| | ||| || || ||||| ||||||||||| | | || ||| | ||||| ||
Sbjct 34641551 AAATGAAGGGTCGATTCCTTCTGAATATTGTAATCAGCTAAGGTACGACCA-TCCTCAAG 34641493
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||| || || || | ||||||| |||||| || |||||||| ||||| ||||| ||
Sbjct 34641492 CTGTTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAGGGATACCTTCTTTGTCTTGAAT 34641433
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | |||| ||||| | | || || || | |||| ||| || ||
Sbjct 34641432 CTTAGCCTTGACATTGTCAATGGTGTCCGAGCTTTCTACCTCAAGAGTGATGGTCTTCCC 34641373
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| |||||||| || || ||||||||
Sbjct 34641372 AGTAAGAGTTTTCACAAAGATCTGCAT 34641346
Score = 105 bits (116), Expect = 6e-18
Identities = 152/209 (73%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | ||| || || ||||| || ||||| || | | ||| ||| ||| || ||
Sbjct 34641779 AAATGAAGGGTCGATTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACC-GTCTTCCAG 34641721
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| || ||||||| | ||||||||| || |||||||| |||||||| |||
Sbjct 34641720 CTGCTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGAT 34641661
Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
| || |||| | | | |||| ||||| | | || || || | ||||| ||| || |
Sbjct 34641660 C-TTAGCTTTAACATTATCAATAGTGTCAGAGCTTTCAACTTCTAGGGTGATGGTCTTTC 34641602
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661
| || || || || || || |||||||||
Sbjct 34641601 CAGTAAGTGTCTTAACAAAGATCTGCATG 34641573
Score = 102 bits (112), Expect = 8e-17
Identities = 147/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| |||||||| || |||||||| || | | ||| | | | || || || |
Sbjct 34079785 ATGGAGGGTAGACTCTTTTTGAATATTGTAGTCTGCAAGTGTGCGGCCA-TCTTCAAGTT 34079727
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
| || || || | || |||| ||||||||| || |||||||| || ||||| ||||
Sbjct 34079726 GTTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGAATCT 34079667
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
|| |||| | |||| ||||||| | |||||| || | |||| ||| || || |
Sbjct 34079666 TTGCTTTGACATTATCAATAGTGTCGGAGCTCTCCACCTCTAGCGTGATGGTCTTTCCTG 34079607
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
||| ||| || || |||||||||||
Sbjct 34079606 TCAAAGTCTTCACAAAAATCTGCAT 34079582
Score = 100 bits (110), Expect = 3e-16
Identities = 150/208 (72%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| || |||||||| |||||||| || | | || ||| | ||||| ||
Sbjct 34407649 AAGTGGAGGGTAGATTCTTTCTGAATATTGTAGTCAGCAAGGGTACGACCA-TCCTCAAG 34407591
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || || |||| |||| ||||||||| || ||||||||||| || || |||
Sbjct 34407590 CTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGGATGCCTTCTTTATCC-TGAA 34407532
Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||||| || | | |||| ||||| | | |||||| || | || | || || |
Sbjct 34407531 TTTTTGCCTTCACATTATCAATTGTGTCTGAGCTCTCCACCTCCAAAGTAATTGTCTTTC 34407472
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| |||| || || || |||||||||||
Sbjct 34407471 CTGTCAATGTCTTCACAAAAATCTGCAT 34407444
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||| | ||||| || ||||| ||||||||||| ||| || ||||| | |
Sbjct 34407421 AAATGGAGTGTGGATTCCTTCTGAATATTGTAATCAGCCAATGTCCTTCCATCCTCCAAC 34407362
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| || |||| | || ||||||||| || ||||| ||||||||||| |||
Sbjct 34407361 TGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCTTGGATT 34407302
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
||| ||| | | |||| || || | || || || | ||||| || || ||
Sbjct 34407301 TTTGCCTTCACATTGTCAATTGTATCCGAACTTTCTACTTCAAGGGTGATTGTCTTCCCT 34407242
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || || || || || |||||
Sbjct 34407241 GTGAGGGTCTTGACAAAGATTTGCAT 34407216
>seq3
Length=50312079
Score = 113 bits (124), Expect = 4e-20
Identities = 150/206 (73%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||| || || |||||||| ||| ||| ||| | | | ||||| ||||
Sbjct 6144155 ATGAAGGGTAGACTCCTTTTGAATATTGTAGTCGGCCAGTGTGCGGCCA-TCCTCCAGCT 6144097
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
|||| || || | || |||| ||||||||| || ||||||||||||||||| ||||
Sbjct 6144096 GCTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGAATCT 6144037
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
|| || | | |||| ||||| | | ||| || || | |||| || || || |
Sbjct 6144036 TTGCTTTCACATTATCAATGGTGTCTGAGCTCTCAACCTCAAGTGTGATAGTCTTCCCAG 6143977
Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661
||||||| || || || |||||||||
Sbjct 6143976 TCAGAGTCTTCACAAATATCTGCATG 6143951
Score = 109 bits (120), Expect = 5e-19
Identities = 150/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | ||| ||||| ||||| || |||||||| | | || | | | ||||| ||
Sbjct 6143245 AAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGCTAAGGTCCGTCCA-TCCTCTAG 6143187
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || || | ||||||| |||||| || |||||||| ||||||||||| ||
Sbjct 6143186 CTGCTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAGGGATACCTTCCTTGTCTTGAAT 6143127
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| |||| | |||| ||||| | || || |||| ||||| || |||||
Sbjct 6143126 CTTCGCTTTGACATTGTCAATAGTGTCCGAACTTTCAACCTCGAGGGTGATTGTCTTGCC 6143067
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| |||||||| || || ||||||||
Sbjct 6143066 AGTAAGAGTTTTCACAAATATCTGCAT 6143040
Score = 105 bits (116), Expect = 6e-18
Identities = 149/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | ||| ||||| ||||| || ||||||||| ||| || | | | ||||| ||
Sbjct 6143473 AAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCGGCCAAGGTCCGTCCA-TCCTCTAG 6143415
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||| || || || | ||||||| ||||||||| || ||||| || |||||||| |||
Sbjct 6143414 CTGTTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGAT 6143355
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| |||| | |||| || || | | || || || | |||| || |||||
Sbjct 6143354 CTTAGCTTTGACATTATCAATGGTATCAGAGCTTTCGACTTCTAGAGTGATAGTCTTGCC 6143295
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || ||||| |||||||||||
Sbjct 6143294 AGTAAGTGTCTTTACAAAAATCTGCAT 6143268
Score = 96.9 bits (106), Expect = 3e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||| | ||| || || ||||| || || || || | | || | || ||||||
Sbjct 6143701 AAATGGAGGGTTGATTCCTTCTGGATGTTATAGTCAGCAAGGGTACGCCCATCTTCGAGC 6143642
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| || ||||||||| ||||||||| || ||||| || |||||||| ||||
Sbjct 6143641 TGCTTGCCAGCAAAAATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATC 6143582
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| |||| | |||| || || | || || || | |||| || || |||
Sbjct 6143581 TTAGCTTTGACATTATCAATAGTATCAGAACTTTCAACTTCTAGAGTGATAGTCTTTCCG 6143522
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || |||||||||||||||||
Sbjct 6143521 GTAAGGGTCTTTACGAAAATCTGCAT 6143496
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483391637640240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |