Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 1e-12 >seq5 Length=41956025 Score = 89.7 bits (98), Expect = 1e-12 Identities = 112/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 304986 TTAAAGGTAAAGAGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTG 305045 |||||| ||| |||||||||||| |||| ||| ||||||| || ||||| ||||| || Sbjct 7249860 TTAAAGCTAAGGAGGGTCGTATTAGAGGAAATTTAATGGGGAAGCGTGTCGATTTCTCTG 7249919 Query 305046 CAAGAAGTGTAATCACACCTGATTCTCAAATTAGTCTTCATGAATTAGGAGTTCCAATTG 305105 || ||| || |||||||||||| | || | | | || || | ||||| || || | Sbjct 7249920 CACGAACAGTTATCACACCTGATCCGACTATCAATATCGATCAACTTGGAGTGCC-ATGG 7249978 Query 305106 A-AATTGCTTTAAAACTAACATTTCCAGAGA 305135 | || |||||||| |||| | ||||||| Sbjct 7249979 AGTATAGCTTTAAATTTAACTTACCCAGAGA 7250009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186739415655786