Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq3 111 1e-19 seq1 107 1e-18 seq15 102 5e-17 seq7 95.1 8e-15 seq6 95.1 8e-15 seq4 84.2 1e-11 seq2 84.2 1e-11 >seq3 Length=50312079 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||||||| | || |||| ||| |||||| || ||||| ||||||||||| | Sbjct 6143950 CCACCTCTCAACCTCAATACCAGATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCC 6143891 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||| | | || |||||||| || || ||||||||||| | |||||| ||| | || Sbjct 6143890 AATGTCCTACCATCCTCCAATTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGGGGA 6143831 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| ||||||| |||| |||| ||| | || || ||| || Sbjct 6143830 ATTCCCTCCTTGTCTTGAATTTTCGCTTTC-ACATTGTCAATTGTATCAGAACTTTCTAC 6143772 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || ||||| || || || | || || |||||||| ||||| Sbjct 6143771 TTCAAGGGTAATCGTCTTCCCAGTGAGAGTCTTAACAAAGATTTGCAT 6143724 >seq1 Length=51465339 Score = 107 bits (118), Expect = 1e-18 Identities = 166/233 (71%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | ||| | || || || ||| || || ||||||||||| | Sbjct 45561472 ACCACCACGCAGACGAAGCACAAGGTGAAGTGTAGACTCCTTCTGAATGTTGTAATCAGC 45561413 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| |||||||| ||||| ||||| |||||||||||||||||| | || Sbjct 45561412 AAGAGTCCTGCCGTCTTCCAATTGCTTTCCAGCAAAGATCAAACGCTGCTGATCTGGTGG 45561353 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATT 33697 | ||||| ||||| ||| || | | |||| ||| | |||||| ||| | Sbjct 45561352 GATTCCTTCCTTGTCCTGAATCTT-AGCCTTGACATTGTCAATGGTGTCAGAGCT---CT 45561297 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || |||| || || || || || || || || || ||||||||||||||| Sbjct 45561296 CAACCTCAAGAGTAATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCATA 45561244 Score = 102 bits (112), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || |||||| || || || |||||||| |||| || || | |||| || | ||| Sbjct 30446251 TGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGT 30446310 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 |||||||| || || | || ||||| || | || | ||||||||||| ||||| Sbjct 30446311 TTTCCGGCGAAGATGAGGCGTTGCTGGTCGGGAGGGATGCCTTCTTTGTCTTGGATTTTG 30446370 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 ||| | ||| ||| | ||||||| |||||||| || | ||||| ||||| || || Sbjct 30446371 GCTTTGA-CATTGTCGATGGTGTCGGAGGATTCCACCTCCAGGGTGATGGTTTTGCCGGT 30446429 Query 33726 TAACGTTTTTACAAAGATCTGCATAGTTGG 33755 | |||||||| ||||||||||| || || Sbjct 30446430 GAGGGTTTTTACGAAGATCTGCATTGTGGG 30446459 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 33520 TCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCG 33579 |||||||| | | ||| |||||||| || || || ||| || || || |||||||| Sbjct 45561702 TCACCACCACGAAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATATTGTAATCT 45561643 Query 33580 GAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGC 33639 | || || | | | || || | || || || ||||| ||||| | |||||||||| | Sbjct 45561642 GCAAGGGTCCTTCCATCCTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGA 45561583 Query 33640 GGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTC 33698 || | |||||| || || ||| || |||| ||| ||| ||||||| || Sbjct 45561582 GGAATACCTTCCTTATCCTGAATCTTGGCCTTCA-CATTATCAATGGTGTCGGAGCTCTC 45561524 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 ||| || | ||||| || || || || | || || ||||||||||||||| Sbjct 45561523 CACTTCCAAGGTGATAGTCTTTCCAGTCAGAGTCTTAACAAAGATCTGCATA 45561472 >seq15 Length=668940 Score = 102 bits (112), Expect = 5e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| ||||| | ||| | ||| ||| || || ||||||||||| | Sbjct 334917 CCACCACGAAGACGCAACACAAGATGGTGTGTGGACTCCTTCTGGATGTTGTAATCAGCC 334858 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | |||| |||||||| || || ||||| |||||||||||||| ||| |||| Sbjct 334857 AGGGTCCTGCCGTCCTCCAATTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGCGGA 334798 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTC 33698 | |||||| ||||| || || ||| || | ||| | ||| || ||| || Sbjct 334797 ATACCTTCCTTGTCCTGGATCTTAGCCTTC-ACGTTGTCAATGGTATCTGAGCT---CTC 334742 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | || || || || ||||| || || || ||||||||||||||| Sbjct 334741 AACTTCGAGAGTAATAGTCTTCCCTGTCAAGGTCTTGACAAAGATCTGCATA 334690 >seq7 Length=36358036 Score = 95.1 bits (104), Expect = 8e-15 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || |||||| ||| || || |||||||| |||| || || | |||| || | || Sbjct 14364751 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGC 14364692 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || || | |||||||| || |||| | ||||||||||| ||| || Sbjct 14364691 TTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCTTTGTCTTGAATCTT- 14364633 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | || |||| ||| | |||||| |||||||| || | ||||| ||||| || || Sbjct 14364632 GGCTTTGACATTGTCGATTGTGTCGGAGGATTCCACCTCCAGGGTGATAGTTTTGCCGGT 14364573 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | ||||| || ||||||||||| Sbjct 14364572 GAGGGTTTTCACGAAGATCTGCAT 14364549 >seq6 Length=36610139 Score = 95.1 bits (104), Expect = 8e-15 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | ||| | ||| || || ||||||||| || ||||| || | Sbjct 34642256 CCACCACGGAGACGGAGCACAAGATGAAGGGTAGACTCTTTTTGAATATTGTAGTCTGCA 34642197 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 |||||||| | || || | ||||||||| ||||| || | | |||||| ||| | || Sbjct 34642196 AGTGTGCGGCCATCTTCAAGTTGTTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGG 34642137 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTC---GCTTGATTC 33698 | || || ||||| ||| || || || |||| ||| ||||| ||| || Sbjct 34642136 ATGCCCTCCTTGTCTTGAATCTT-TGCTTTGACATTATCAATAGTGTCAGAGCTC---TC 34642081 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| || | |||||| || || ||||| || || || |||||||||||||| Sbjct 34642080 CACCTCTAGCGTGATGGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCAT 34642030 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| | || |||||||| || ||| || ||||| ||||||||||| | Sbjct 34642028 CCACCCCTCAGCCTCAATACCAAATGAAGTGTGGATTCCTTTTGAATGTTGTAATCTGCC 34641969 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||| | | |||| ||||| || || || ||||| ||||| | |||||||||| | || Sbjct 34641968 AATGTCCTTCCGTCCTCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGATCTGGAGGA 34641909 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTC 33698 | || |||||||| || || || | ||||| ||| | || || ||| || Sbjct 34641908 ATTCCCTCTTTGTCTTGGATCTT-TGCCTTAACATTGTCAATTGTATCAGAGCT---CTC 34641853 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | || || || || || || | ||| || |||||||| ||||| Sbjct 34641852 TACCTCCAAGGTAATTGTCTTTCCAGTAAGCGTCTTGACAAAGATTTGCAT 34641802 Score = 89.7 bits (98), Expect = 3e-13 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 ||||| || |||||||| |||| | || | | | || || | || ||||| ||||| Sbjct 34407862 TCTTTCTGGATGTTGTAGTCGGCCAAAGTCCTTCCATCCTCTAGCTGCTTTCCAGCAAAG 34407803 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 ||||| | |||||||||| | || | || |||||||| ||| ||| |||| ||| Sbjct 34407802 ATCAACCTCTGCTGATCTGGAGGGATGCCCTCTTTGTCCTGAATCTTCGCCTTCA-CATT 34407744 Query 33679 GTCACG-GTGTC---GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTT 33734 ||| ||||| |||| || || || | |||||||| || || || ||||| || Sbjct 34407743 ATCAATCGTGTCCGAGCTT---TCAACTTCTAGAGTGATCGTCTTCCCAGTCAACGTCTT 34407687 Query 33735 TACAAAGATCTGCAT 33749 |||||||||||||| Sbjct 34407686 GACAAAGATCTGCAT 34407672 Score = 89.7 bits (98), Expect = 3e-13 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| |||||| || |||||||| || | || || | | | || ||||| || Sbjct 34642460 TGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCCAGGGTTCTTCCATCCTCCAACTGC 34642401 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 ||||| ||||||||||||||||| |||||| | || | || |||||||| |||||| Sbjct 34642400 TTTCCAGCAAAAATCAAACGCTGTTGATCTGGTGGGATTCCCTCTTTGTCCTGGATTTTC 34642341 Query 33667 TGTTTCAACATAGTCACGGTGTCGCT-TGAT-TCCACGTCAACCGTGATCGTTTTACCTG 33724 ||| |||| ||| ||| || | | || || || | ||||| || || || | Sbjct 34642340 GCCTTC-ACATTATCA-ATTGTATCTGAGCTCTCAACCTCCAAGGTGATGGTCTTGCCAG 34642283 Query 33725 TTAACGTTTTTACAAAGATCTGCAT 33749 | || || || |||||||| ||||| Sbjct 34642282 TCAATGTCTTCACAAAGATTTGCAT 34642258 Score = 86.0 bits (94), Expect = 4e-12 Identities = 165/240 (69%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| |||| | || |||||||| |||||| || || || ||| Sbjct 34079592 AAAATCTGCATTCCACCCCTCAGCCTCAATACCAAATGAAGAGTGGATTCCTTCTGAATG 34079533 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| | | || | | |||| ||||| || || || ||||| ||||| | |||| Sbjct 34079532 TTGTAATCTGCCAAGGTCCTTCCGTCCTCCAACTGCTTCCCAGCAAATATCAACCTCTGC 34079473 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 |||||| | || | || || ||||| || || || | ||||| ||| | || || Sbjct 34079472 TGATCTGGAGGAATTCCCTCCTTGTCTTGGATCTT-TGCCTTAACATTGTCGATCGTATC 34079414 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || | ||||| || || || || | || || |||||||| ||||| Sbjct 34079413 GGAGCTCTCTACTTCCAAGGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAGATTTGCAT 34079354 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | |||||||| || ||| || || || || |||||||| | Sbjct 34079124 CCACCACGTAGACGAAGAACCAAATGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCT 34079065 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||| | || || | ||||| || ||||| || | | |||||||||| | || Sbjct 34079064 AAGGTGCGACCATCCTCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGAGGG 34079005 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGA---TTC 33698 | |||||| ||||| ||| || || | ||| |||| |||||| ||| ||| Sbjct 34079004 ATACCTTCCTTGTCTTGAATCTTAGCCTTGA-CATTGTCAATGGTGTC---TGAGCTTTC 34078949 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| ||||| || || || || | || || |||||||||||||| Sbjct 34078948 TACCTCAAGAGTGATGGTCTTCCCGGTAAGAGTCTTCACAAAGATCTGCAT 34078898 Score = 82.4 bits (90), Expect = 5e-11 Identities = 165/241 (68%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| |||| | | |||||||| || ||| || || || || Sbjct 34407454 AAAATCTGCATTCCACCCCTCAGCCTCAGTACCAAATGGAGTGTGGATTCCTTCTGAATA 34407395 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| | | ||| | | | || ||||| || || || ||||||||||| | |||| Sbjct 34407394 TTGTAATCAGCCAATGTCCTTCCATCCTCCAACTGCTTGCCAGCAAAAATCAACCTCTGC 34407335 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || || | || | ||||| ||||| ||||| || | |||| ||| | || || Sbjct 34407334 TGGTCCGGGGGGATTCCTTCCTTGTCTTGGATTTT-TGCCTTCACATTGTCAATTGTATC 34407276 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| || |||| ||||| || || ||||| | || || |||||||| ||||| Sbjct 34407275 CGAACTTTCTACTTCAAGGGTGATTGTCTTCCCTGTGAGGGTCTTGACAAAGATTTGCAT 34407216 Query 33750 A 33750 | Sbjct 34407215 A 34407215 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | |||||||| || || || || || || |||||||| | Sbjct 34641572 CCACCACGTAGACGAAGAACCAAATGAAGGGTCGATTCCTTCTGAATATTGTAATCAGCT 34641513 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || || | || || | ||||| || ||||| || | | |||||||||| | || Sbjct 34641512 AAGGTACGACCATCCTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAGGG 34641453 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTC 33698 | |||||||||||| ||| || | | |||| ||| | |||||| ||| ||| Sbjct 34641452 ATACCTTCTTTGTCTTGAATCTT-AGCCTTGACATTGTCAATGGTGTCCGAGCT---TTC 34641397 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| ||||| || || || || | ||||| |||||||||||||| Sbjct 34641396 TACCTCAAGAGTGATGGTCTTCCCAGTAAGAGTTTTCACAAAGATCTGCAT 34641346 >seq4 Length=35924511 Score = 84.2 bits (92), Expect = 1e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || || || |||||| || ||||||||||| | || || | | | || || Sbjct 27885316 ACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCTGCAAGAGTTCTTCCATCTTCT 27885257 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656 ||||| ||||| ||||||||||| | |||||||||| | || | |||||| || || Sbjct 27885256 AATTGCTTTCCAGCAAAAATCAACCTCTGCTGATCTGGAGGAATACCTTCCTTATC 27885201 >seq2 Length=43913520 Score = 84.2 bits (92), Expect = 1e-11 Identities = 160/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| ||||| | || || || ||| || || || ||||| || | Sbjct 39748489 ACCACCACGGAGACGCAACACAAGGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCTGC 39748430 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | || ||||| || ||||| ||||| |||||||||||||| ||| | || Sbjct 39748429 AAGGGTCCTGCCATCCTCCAACTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGTGG 39748370 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATT 33697 | ||||| || || |||||| || || || | ||| | ||||| ||| | Sbjct 39748369 GATGCCTTCCTTATCCTGAATTTT-TGCTTTGACGTTGTCAATAGTGTCAGAGCT---CT 39748314 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || |||| ||||| || || || || | || || |||||||||||||| Sbjct 39748313 CAACTTCAAGGGTGATTGTCTTCCCAGTCAGGGTCTTGACAAAGATCTGCAT 39748262 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/212 (69%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || |||||| ||| || || |||||||| |||| || || | |||| |||| || Sbjct 31249779 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCCAGCTGC 31249720 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 |||||||| || || | |||||||| || | || | ||||||||||| || || Sbjct 31249719 TTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCTTTGTCCTGGATCTT- 31249661 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | | |||| ||| | |||||| || || || || | ||||| || || || || Sbjct 31249660 GGCCTTGACATTGTCGATGGTGTCCGAAGACTCGACCTCGAGAGTGATGGTCTTGCCGGT 31249601 Query 33726 TAACGTTTTTACAAAGATCTGCATAGTTGGTG 33757 || ||||| || ||||||||||| | |||| Sbjct 31249600 TAGGGTTTTCACGAAGATCTGCATTTTGGGTG 31249569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328684666657920