Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq4825 601 4e-167 seq6 403 2e-107 seq8 316 2e-81 seq4 163 3e-35 seq36 140 4e-28 seq4826 129 7e-25 seq1731 123 3e-23 seq3 102 9e-17 >seq4825 Length=155848 Score = 601 bits (666), Expect = 4e-167 Identities = 733/994 (74%), Gaps = 4/994 (0%) Strand=Plus/Minus Query 159960 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 160019 ||||| | ||| |||| ||| | ||||| || || | || ||||| || || || Sbjct 1277 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1218 Query 160020 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 160078 ||||| || ||| | ||| | ||||| ||||| || || |||||||| | |||||||| Sbjct 1217 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 1159 Query 160079 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 160138 || || || || || || || |||||||| || |||| || || | ||||| ||||| Sbjct 1158 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACAA 1099 Query 160139 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160198 || || || ||||| || |||| |||| || || ||| | ||||| ||||| || Sbjct 1098 TATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAAT 1039 Query 160199 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 160258 ||||||||| || || ||||||| ||| | || ||||||||||||| || | | || Sbjct 1038 CTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGTCCTTATGAATTAATCGT 979 Query 160259 ATTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCG 160318 | ||||| | | || | | || ||||| ||||||||||| ||| | ||| Sbjct 978 TCTACACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCG 919 Query 160319 TTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGC 160378 | |||||||||| || ||||| ||| |||||||| ||||| || || || || |||| Sbjct 918 TCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 859 Query 160379 TGTATTCCTCGTATATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 160438 ||| ||| | | || || |||||||||| || || |||| ||||||||| || || Sbjct 858 TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAAT 799 Query 160439 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCC 160498 |||||||||||| |||| |||| |||||||||| || || ||||| ||||||||||| || Sbjct 798 CTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 739 Query 160499 GTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGG 160558 || |||||| | ||||| ||||| |||||||| || || | || ||||||||| || Sbjct 738 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGG 679 Query 160559 AAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTACG 160617 | | || || || | | | || | ||||| || |||| || || || | | Sbjct 678 TTCTTTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 620 Query 160618 GTTATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACTTCG 160677 |||| | |||||| ||||| ||||| || || || ||||| || || |||||||| || | Sbjct 619 GTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 560 Query 160678 GTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTGG 160737 | || || |||||||||||||| ||||||||||| ||||| | ||||||||||| | Sbjct 559 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAG 500 Query 160738 CAGCATGGCCTGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCA 160797 | || ||||||||||| || |||||||| |||||| | ||| | ||||| ||||| |||| Sbjct 499 CTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGGCTTTCA 440 Query 160798 ACCTCAACGGTTTCAACTTCAACCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGAACA 160857 |||| || |||||||| |||||||| || | | ||| ||||||| |||||| | || | Sbjct 439 ACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATA 380 Query 160858 CCTGGGCAGACGTACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACG 160917 | ||||| || | | || || ||| |||||||||||||||||||| || ||||| | Sbjct 379 CTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCACGAACGTAATG 320 Query 160918 CACACAACTTCCCACTCGACCTCGCTGCTGCTGA 160951 | || |||||||| || ||| | ||||||| ||| Sbjct 319 CTCATAACTTCCCTCTAGACTTAGCTGCTGTTGA 286 Score = 526 bits (582), Expect = 2e-144 Identities = 733/1021 (72%), Gaps = 6/1021 (1%) Strand=Plus/Plus Query 161688 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 161747 ||||| || | || |||||| | |||| |||||||||||||| || ||||| || Sbjct 33139 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGT 33198 Query 161748 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACAACTTTC 161807 || | || |||| ||| ||| | ||| | || || ||| | || || ||||| || Sbjct 33199 CTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGAGGCTGGTTCACAGGTACAACCTTT 33258 Query 161808 GCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTTG-AGGGTGCAAACTTTCT 161866 | ||| |||||||||||||| | || ||||||||| | | ||| ||||| ||||| Sbjct 33259 GTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAA--TTTCT 33316 Query 161867 T-ACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGG 161924 | || || ||||| ||||| ||| | | | | |||||| || || || || ||| Sbjct 33317 TAACTGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACATTCT-TTGTTGTTACTGTGG 33375 Query 161925 GGTCCTGAGGCTCAAGGGGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGAATTTT 161984 |||||||| || ||||||||||| || ||| ||| | || || || |||| |||| Sbjct 33376 GGTCCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTT 33435 Query 161985 GTGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCA 162044 || || ||||||||||| |||| ||||| || |||||| | ||||| || ||||| || Sbjct 33436 GTTGCCCTCCATGGTGCTTTCGGACTAATAGGCTTCATGTTACGTCAATTCGAACTTGCT 33495 Query 162045 CGTCTTATTGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTT 162104 || | || | || || || ||||| || ||||| |||||||| |||||||||||| Sbjct 33496 CGATCTGTTCAATTGCGACCTTATAATGCAATCGCGTTTTCTGGTCCAATTGCTGTTTTT 33555 Query 162105 GTCAGCGTCTTCCTTATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTT 162164 || || ||||| || || ||| | || || || ||||||| || || || ||| Sbjct 33556 GTTTCTGTATTCCTGATTTATCCACTAGGACAATCTGGTTGGTTCTTTGCGCCAAGTTTT 33615 Query 162165 GGGGTGGCAGCAATCTTTAGATTCCTGTTGTTTCTTCAAGGATTCCATAACTGGACCCTG 162224 || || ||||| || ||| ||||| | | ||| |||||||||| ||||| ||||| | Sbjct 33616 GGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACATTA 33675 Query 162225 AACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTTCTATCTGCTATT 162284 ||||| || ||||||||||||||||| || || | || | || | |||| |||||| Sbjct 33676 AACCCATTTCATATGATGGGAGTTGCAGGGGTATTGGGCGCTGCTTTGCTATGCGCTATT 33735 Query 162285 CACGGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAG 162344 || || | || || |||||||| |||| || ||||| || ||||| || || Sbjct 33736 CATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGT 33795 Query 162345 GCGTTTGATTCGACACAGGAGGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGG 162404 || ||| | | || || | ||||| |||||||| |||||||| || |||||||| ||| Sbjct 33796 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCGAACCGCTTTTGG 33855 Query 162405 TCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTT 162464 || || ||||| || |||| ||||| || || || ||| | ||||| || ||||| ||| Sbjct 33856 TCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 33915 Query 162465 GTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTT 162524 || || || | ||| |||||| || |||| | ||||||| || || ||||| Sbjct 33916 GTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTG 33975 Query 162525 CGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACG 162584 || || || || ||||| |||||| || | || |||||||||||||| ||||| || Sbjct 33976 CGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAGAAGATCCTGAATTTGAGACT 34035 Query 162585 TTCTACACTAAGAACATTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGAC 162644 |||||||| || || ||||| | || ||||| | ||||| ||| | || || || Sbjct 34036 TTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGAT 34095 Query 162645 CAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAA 162704 || || ||||| ||| |||| ||||| || || ||||| || | || ||||| |||||| Sbjct 34096 CAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 34155 Query 162705 T 162705 | Sbjct 34156 T 34156 >seq6 Length=36610139 Score = 403 bits (446), Expect = 2e-107 Identities = 454/604 (75%), Gaps = 3/604 (0%) Strand=Plus/Plus Query 160299 GAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCT 160358 ||| |||| ||| | |||| |||||||||| || ||||| ||| |||||||| ||| Sbjct 34152490 GAGAGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCT 34152549 Query 160359 CCAGTCGCTGCAGCATCTGCTGTATTCCTCGTATATCCTTTCGGTCAAGGTTCTTTCTCC 160418 || || || || || ||||||| ||| | | || || |||||||||| || || Sbjct 34152550 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCT 34152609 Query 160419 GATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAA 160478 |||| ||||||||| || |||||||||||||| |||| |||| |||||||||| || || Sbjct 34152610 GATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAG 34152669 Query 160479 CACAATATCCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCT 160538 ||||| ||||||||||| || || |||||| | ||||| ||||| |||||||| || || Sbjct 34152670 CACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCC 34152729 Query 160539 TTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGA 160597 | || ||||||||| || | | || || | || | | || | ||||| || || Sbjct 34152730 CTATTTAGTGCTATGCATGGTTCTTTGGTAACCT-CTAGTTTGATCAGGGAAACCACAGA 34152788 Query 160598 AACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGT 160657 || || || || | ||||| | |||||| ||||| ||||| || || || ||||| Sbjct 34152789 AAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGT 34152848 Query 160658 CGCAGCCCATGGTTACTTCGGT-CGTTTGATCTTCCAATATGCATCATTCAACAACTCCC 160716 || || |||||||| || ||| || || |||||||||||||| ||||||||||| | Sbjct 34152849 AGCCGCTCATGGTTATTTTGGTCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTC 34152908 Query 160717 GTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTAGTCGGAATCTGGTTCACTGCTCTTG 160776 |||| | ||||||||||| || || ||||||||||| || |||||||| |||||| | | Sbjct 34152909 GTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAG 34152968 Query 160777 GTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTCGATG 160836 || | ||||| ||||| |||||||| || |||||||| |||||||| || | | ||| Sbjct 34152969 GTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATA 34153028 Query 160837 GTCAAGGTCGTGTACTGAACACCTGGGCAGACGTACTGAATCGTGCTGGTCTTGGTATGG 160896 ||||||| |||||| | || || ||||| || | | || || ||| |||||||||| Sbjct 34153029 GTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGG 34153088 Query 160897 AAGT 160900 | || Sbjct 34153089 AGGT 34153092 >seq8 Length=31745509 Score = 316 bits (350), Expect = 2e-81 Identities = 352/467 (75%), Gaps = 2/467 (0%) Strand=Plus/Plus Query 160287 TATATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTA 160346 || ||||| ||||||||||| ||| | |||| |||||||||| || ||||| ||| Sbjct 5168713 TACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTT 5168772 Query 160347 GCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTATATCCTTTCGGTCAA 160406 |||||||| ||||| || || || || ||||||| ||| | | || || |||||||| Sbjct 5168773 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAA 5168832 Query 160407 GGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTA 160466 || || || |||| ||||||||| || |||||||||||||| |||| |||| ||||| Sbjct 5168833 GGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTA 5168892 Query 160467 TTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTA 160526 ||||| || || ||||| ||||||||||| || || |||||| | ||||| ||||| ||| Sbjct 5168893 TTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTA 5168952 Query 160527 TTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTC-G 160585 ||||| || || | || ||||||||| || | | || || | || | | || | Sbjct 5168953 TTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCT-CTAGTTTGATCAG 5169011 Query 160586 TGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAGGAAGAGAC 160645 ||||| || |||| || || || | ||||| | |||||| ||||| ||||| || Sbjct 5169012 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAAC 5169071 Query 160646 CTACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCATT 160705 || || ||||| || || |||||||| || || || || |||||||||||||| || Sbjct 5169072 TTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTT 5169131 Query 160706 CAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTAG 160752 ||||||||| ||||| | ||||||||||| || || |||||||||| Sbjct 5169132 CAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAG 5169178 >seq4 Length=35924511 Score = 163 bits (180), Expect = 3e-35 Identities = 185/248 (75%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 160704 TTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTAGTCGGAATCTGG 160763 ||||||||||| ||||| | ||||||||||| || || ||||||||| | | |||||| Sbjct 4757228 TTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAATAAGTATCTGG 4757287 Query 160764 TTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAG 160823 || |||||| | ||| | ||||| ||| | |||||||| || | |||||| |||||||| Sbjct 4757288 TTTACTGCTTTAGGTATCAGCACTATGACTTTCAACCTAAATGATTTCAATTTCAACCAA 4757347 Query 160824 TCCATCCTCGATGGTCAAGGTCGTGTACTGAACACCTGGGCAGACGTACTGAATCGTGCT 160883 || | | ||| |||||| ||||| | || || || || || | | || || ||| Sbjct 4757348 TCTGTAGTTGATAGTCAAGCCTGTGTAATTAATACTTGAGCTGATATCATTAACCGCGCT 4757407 Query 160884 GGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTCGCT 160943 |||||||| |||||||||| || | ||| || || |||||| | || ||| | ||| Sbjct 4757408 AATCTTGGTAAAGAAGTTATGCTCGAACATAATGCTCATAACTTCTCTCTAGACTTAGCT 4757467 Query 160944 GCTGCTGA 160951 |||| ||| Sbjct 4757468 GCTGTTGA 4757475 >seq36 Length=917149 Score = 140 bits (154), Expect = 4e-28 Identities = 192/266 (72%), Gaps = 2/266 (1%) Strand=Plus/Minus Query 159981 ACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCA 160040 ||| | ||||| || || | || ||||| || || ||||||| || ||| | ||| | Sbjct 329976 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 329917 Query 160041 GCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCAT 160099 ||||| ||||| || || |||||||| | || ||| || || || || || || || Sbjct 329916 GCAACT-TCTGTATTTATTATCGCCTTCATTGCCATTCCTCCAGTAGATATTGATGGTAT 329858 Query 160100 CCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGT 160159 |||||||| || | || || || | ||||| ||||| || || || ||||| || | Sbjct 329857 TCGTGAACCTGTTTCAGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGCCATTAT 329798 Query 160160 TCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGA 160219 ||| |||| || || ||| | ||||| ||||| ||||||||||| || || |||| Sbjct 329797 TCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAATCTGGGAAGCGGCTTCTGTTGA 329738 Query 160220 TGAGTGGCTGTATAACGGTGGTCCTT 160245 ||| ||| | || ||||||||||||| Sbjct 329737 TGAATGGTTATACAACGGTGGTCCTT 329712 >seq4826 Length=244980 Score = 129 bits (142), Expect = 7e-25 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 162505 TTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAG 162564 ||||||| || || ||||| || || || || ||||| |||||| || | || |||| Sbjct 499 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 440 Query 162565 AAGATCCTGAGTTTGAAACGTTCTACACTAAGAACATTCTGCTCAATGAAGGACTACGTG 162624 |||||||||| ||||| || |||||||| || || ||||| | || ||||| | |||| Sbjct 439 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 380 Query 162625 CATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTC 162684 | ||| | || || || || || ||||| ||| |||| ||||| || || ||||| | Sbjct 379 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTAC 320 Query 162685 CTAGAGGCAACGCCCTTTAAT 162705 | | || ||||| ||||||| Sbjct 319 CCCGTGGAAACGCTCTTTAAT 299 >seq1731 Length=31681 Score = 123 bits (136), Expect = 3e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 162505 TTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAG 162564 ||||||| || || ||||| || || || || ||||| |||||| || | || |||| Sbjct 4297 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 4238 Query 162565 AAGATCCTGAGTTTGAAACGTTCTACACTAAGAACATTCTGCTCAATGAAGGACTACGTG 162624 |||||||||| ||||| || |||||||| || || ||||| | || ||||| | |||| Sbjct 4237 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 4178 Query 162625 CATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTC 162684 | ||| | || || || || || ||||| | | |||| ||||| || || ||||| | Sbjct 4177 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAACCCTTATATTCCCTGAGGAGGTTCTAC 4118 Query 162685 CTAGAGGCAACGCCCTTTAAT 162705 | | || ||||| ||||||| Sbjct 4117 CCCGTGGAAACGCTCTTTAAT 4097 >seq3 Length=50312079 Score = 102 bits (112), Expect = 9e-17 Identities = 144/201 (72%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 162505 TTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAG 162564 ||||||| || || ||||| || || || || ||||| ||| || || | || |||| Sbjct 24072548 TTGGTCTAGCCCTGAACCTCCGCGCCTATGACTTCGTTCCTCAAGAAATTCGCGCGGCAG 24072489 Query 162565 AAGATCCTGAGTTTGAAACGTTCTACACTAAGAACATTCTGCTCAATGAAGGACTACGTG 162624 |||||||||| ||||| | || |||| || || ||||| | || ||||| | |||| Sbjct 24072488 AAGATCCTGAATTTGAGATTTTTGACAC-AAAAATATTCTCTTAAACGAAGGTATTCGTG 24072430 Query 162625 CATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTC 162684 | ||| | || || || || || ||||| ||| |||| ||||| || | ||||| | Sbjct 24072429 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGGGGTTCTAC 24072370 Query 162685 CTAGAGGCAACGCCCTTTAAT 162705 | | || ||||| ||||||| Sbjct 24072369 CCCGTGGAAACGCTCTTTAAT 24072349 Score = 96.9 bits (106), Expect = 4e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 162505 TTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAG 162564 ||||||| || || |||| || || || || ||||| |||| | || | || |||| Sbjct 34945760 TTGGTCTAGCCCTGAACCCGCGCGCCTATGACTTCGTTTCTCAGAAAATTCGCGCGGCAG 34945819 Query 162565 AAGATCCTGAGTTTGAAACGTTCTACACTAAGAACATTCTGCTCAATGAAGGACTACGTG 162624 |||||||||| ||||| || |||||||| || || ||||| | || ||||| | |||| Sbjct 34945820 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 34945879 Query 162625 CATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTC 162684 | ||| | || || || || | ||||| | |||| ||||| || || ||| | Sbjct 34945880 CTTGGATGGCGGCTCAAGATCAGACTCATGAAAGACTTATATTCCCTGAGGAGTATCTAC 34945939 Query 162685 CTAGAGGCAACGCCCTTTAAT 162705 | | || ||||| ||||||| Sbjct 34945940 CCCGTGGAAACGCTCTTTAAT 34945960 Score = 82.4 bits (90), Expect = 9e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 161126 TACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGT 161185 ||||| ||||||| || || |||||||| || || || |||||||| | || ||| Sbjct 21245166 TACATCCTAGATGCTGCTGAGGAGGCAGGTGTGGAGCTTCCATATTCTTGCAGGGCAGGT 21245107 Query 161186 GCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCC 161245 || |||||| ||||||| || || |||||| ||| | || |||||| |||| || Sbjct 21245106 GCATGCTCTACCTGTGCTGGAAAGATTATTGAAGGCTCCGTTGACCAGGCTGATGGATCG 21245047 Query 161246 TTCTTGGATGATGACCAGATTGAATCTGGATTCCTTTTGACATGTGTTGCATATCCTACT 161305 ||| | ||||| | || || | | || | | | | || || || | || || | Sbjct 21245046 TTCCTTGATGACAAACAAATGGGAGAGGGTTACTTGCTTACTTGCGTGTCCTACCCGAAA 21244987 Query 161306 AGCGATTGTGTGATTCAAAC 161325 ||||||||||||||| || Sbjct 21244986 TCCGATTGTGTGATTCACAC 21244967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559470247921200