Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq4825 600 1e-166 seq6 410 1e-109 seq8 363 2e-95 seq36 143 3e-29 seq4826 132 6e-26 seq1731 129 7e-25 seq3 116 5e-21 seq4 114 2e-20 seq1 100 3e-16 >seq4825 Length=155848 Score = 600 bits (664), Expect = 1e-166 Identities = 731/992 (74%), Gaps = 5/992 (1%) Strand=Plus/Minus Query 180981 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 181040 ||||| | ||| |||| ||| | ||||| || || | || ||||| || || || Sbjct 1277 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1218 Query 181041 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 181099 ||||| || ||| | ||| | |||||| ||||| || || |||||||| | |||||||| Sbjct 1217 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 1159 Query 181100 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 181159 || || || || || || || |||||||| || |||| || || | ||||| ||||| Sbjct 1158 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACAA 1099 Query 181160 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 181219 || || || ||||| || |||| |||| || || ||| | ||||| ||||| || Sbjct 1098 TATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAAT 1039 Query 181220 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 181279 ||||||||| || || ||||||| ||| | || ||||||||||||| || | | || Sbjct 1038 CTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGTCCTTATGAATTAATCGT 979 Query 181280 CTTTCACTTCCTTATCGGCATTTATGCATACATGGGACGTGAATGGGAACTCTCTTACCG 181339 | ||||| | | || | | |||||||| ||||| ||||| || || ||| Sbjct 978 TCTACACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCG 919 Query 181340 CTTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCAGCAGCATCTGC 181399 |||||||||| || ||||| ||||||||| || ||||| || ||||| || |||| Sbjct 918 TCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 859 Query 181400 TGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCAT 181459 ||| ||| | |||| || |||||||||| || ||||| | ||||| || || || Sbjct 858 TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAAT 799 Query 181460 CTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATTCTGATGCATCC 181519 ||||||||| ||||||| |||| |||| ||||| || ||||||||||| || ||||| || Sbjct 798 CTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 739 Query 181520 CTTCCACATGTTGGGTGTCGCAGGTGTATTTGGTGGTTCACTGTTCAGTGCAATGCACGG 181579 || |||||||| || || || |||||||| || ||||| || || ||||| ||||| || Sbjct 738 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGG 679 Query 181580 TTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGG 181639 ||||||||| || ||| | || | || || || |||| ||| || || | || Sbjct 678 TTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 619 Query 181640 TTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCCACGGTTACTTTGG 181699 ||||| |||||| ||||||||||| || || || ||||| ||||| || ||||| ||||| Sbjct 618 TTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGG 559 Query 181700 TCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGC 181759 || || ||||||||||||||| ||||||||||| ||||| | ||||||||||| || Sbjct 558 CCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGC 499 Query 181760 AGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAA 181819 || ||||||||||| || |||||||| || || | || | ||||| ||||| || || Sbjct 498 TGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGGCTTTCAA 439 Query 181820 CCTCAATGGATTCAACTTCAACCAGTCTATCCTCGACGGACAAGGACGTGTCCTCAACAC 181879 ||| ||||| ||||| |||||||| ||| | | || | ||||| ||||| | || || Sbjct 438 CCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATAC 379 Query 181880 CTGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGC 181939 ||||| || | | ||||| || || || |||||||| |||||||| || || || Sbjct 378 TTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCACGAACGTAATGC 319 Query 181940 GCACAACTTCCCGCTTGATCTTGCAGCAGCTG 181971 || |||||||| || || ||| ||| |||| Sbjct 318 TCATAACTTCCCTCTAGA-CTT--AGCTGCTG 290 Score = 508 bits (562), Expect = 7e-139 Identities = 720/1006 (72%), Gaps = 6/1006 (1%) Strand=Plus/Plus Query 182371 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 182430 |||| |||||| | |||| || || || ||||| || ||||| || || | || Sbjct 33149 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGTCTATTGCTCT 33208 Query 182431 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 182490 |||| ||| ||| | || | || || ||| | || || ||| | ||||| || | Sbjct 33209 TTCCTTGTGCCTATTTCGCTGTAGGAGGCTGGTTCACAGGTACAACCTTTGTAACTTCAT 33268 Query 182491 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTCTTA-CGGCAGC 182548 |||| ||||| || | || ||||||| | ||||| ||| | ||||||| | || || Sbjct 33269 GGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAA--TTTCTTAACTGCCGC 33326 Query 182549 TGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTC 182608 || || || |||||| || | | | |||||| | | |||| ||||||||||| | Sbjct 33327 AGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTGTGGGGTCCTGAAGC 33386 Query 182609 TCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCA 182668 || ||| |||| || ||||| ||| | || || || |||| ||| || || ||||| Sbjct 33387 ACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCCCTCCA 33446 Query 182669 CGGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCG-CCTGATTG 182727 ||||| |||| || || || |||||| | | ||||| ||||||||||| ||| || Sbjct 33447 TGGTGCTTTCGGACTAATAGGCTTCATGTTACGTCAATTCGAACTTGCTCGATCTG-TTC 33505 Query 182728 GAATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGT 182787 | | ||||||| ||||| || || ||||||||||| |||||||| || || ||| | Sbjct 33506 AATTGCGACCTTATAATGCAATCGCGTTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTAT 33565 Query 182788 TCCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGG 182847 |||| || ||||| | ||||| || |||||| || ||||| |||||||| || | Sbjct 33566 TCCTGATTTATCCACTAGGACAATCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCAG 33625 Query 182848 CGATCTTCAGGTTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTCC 182907 | || || | ||| | | || |||| || || || || |||||| | ||||| || | Sbjct 33626 CTATATTTCGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACATTAAACCCATTTC 33685 Query 182908 ATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTCA 182967 |||||||||||||||| || || |||| | || |||| | ||||| ||||||| | Sbjct 33686 ATATGATGGGAGTTGCAGGGGTATTGGGCGCTGCTTTGCTATGCGCTATTCATGGTGCTA 33745 Query 182968 CAGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGATT 183027 | ||||| ||||| || | ||||||||| || ||||| ||||| || || | Sbjct 33746 CTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACC 33805 Query 183028 CCACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATCT 183087 | ||||| | || || || ||||| ||||| || ||||| || |||||||| ||||||| Sbjct 33806 CAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCGAACCGCTTTTGGTCCCAAATCT 33865 Query 183088 TCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCA 183147 | |||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || | Sbjct 33866 TTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAA 33925 Query 183148 TGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTATG 183207 ||| | ||| | | || |||| | |||| || || || || || || || |||| Sbjct 33926 CTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTGCGCGCCTATG 33985 Query 183208 ATTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACAA 183267 | || || ||| || ||| | || |||||||||||||| || ||||| |||||||||| Sbjct 33986 ACTTCGTTTCTCAGGAAATTCGCGCGGCAGAAGATCCTGAATTTGAGACTTTCTACACAA 34045 Query 183268 AGAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACATG 183327 | || || || | || ||||| | ||||||||| |||| || ||||| || |||| Sbjct 34046 AAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATG 34105 Query 183328 AAAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373 ||||| | || |||||||| || |||||||| | || ||||| || Sbjct 34106 AAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 34151 >seq6 Length=36610139 Score = 410 bits (454), Expect = 1e-109 Identities = 445/589 (76%), Gaps = 1/589 (0%) Strand=Plus/Plus Query 181334 TTACCGCTTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCAGCAGC 181393 || ||| |||||||||| || ||||| ||||||||| || ||||| || ||||| || Sbjct 34152504 TTTCCGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGC 34152563 Query 181394 ATCTGCTGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACT 181453 ||||||| ||| | |||| || |||||||||| || ||||| | ||||| || Sbjct 34152564 TACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCT 34152623 Query 181454 TGGCATCTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATTCTGAT 181513 || ||||||||||| ||||||| |||| |||| ||||| || ||||||||||| || || Sbjct 34152624 AGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTAT 34152683 Query 181514 GCATCCCTTCCACATGTTGGGTGTCGCAGGTGTATTTGGTGGTTCACTGTTCAGTGCAAT 181573 ||| || || |||||||| || || || |||||||| || ||||| || || ||||| || Sbjct 34152684 GCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTAT 34152743 Query 181574 GCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAA 181633 ||| ||||||||||| || ||| | || | || || || |||| ||| || || Sbjct 34152744 GCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAA 34152803 Query 181634 CTATGGTTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCCACGGTTA 181693 | ||||||| |||||| ||||||||||| || || || ||||| ||||| || ||||| Sbjct 34152804 TGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATGGTTA 34152863 Query 181694 CTTTGGT-CGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCT 181752 |||||| || || ||||||||||||||| ||||||||||| ||||| | ||||||| Sbjct 34152864 TTTTGGTCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCT 34152923 Query 181753 TCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGG 181812 |||| || || ||||||||||| || |||||||| || || | || | ||||| |||| Sbjct 34152924 TCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGG 34152983 Query 181813 CATTTAACCTCAATGGATTCAACTTCAACCAGTCTATCCTCGACGGACAAGGACGTGTCC 181872 | || ||||| ||||| ||||| |||||||| ||| | | || | ||||| ||||| Sbjct 34152984 CTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAA 34153043 Query 181873 TCAACACCTGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGT 181921 | || || ||||| || | | ||||| || || || ||||| || Sbjct 34153044 TTAATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAGGT 34153092 >seq8 Length=31745509 Score = 363 bits (402), Expect = 2e-95 Identities = 360/466 (77%), Gaps = 0/466 (0%) Strand=Plus/Plus Query 181308 TACATGGGACGTGAATGGGAACTCTCTTACCGCTTAGGTATGCGCCCCTGGATCTGTGTT 181367 |||||||| ||||| ||||| || || ||| |||||||||| || ||||| |||| Sbjct 5168713 TACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTT 5168772 Query 181368 GCATACTCTGCTCCAGTCGCAGCAGCATCTGCTGTATTCCTAGTCTATCCTTTCGGTCAA 181427 ||||| || ||||| || ||||| || ||||||| ||| | |||| || |||||||| Sbjct 5168773 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAA 5168832 Query 181428 GGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACATGCTTGTT 181487 || || ||||| | ||||| || || ||||||||||| ||||||| |||| |||| Sbjct 5168833 GGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTA 5168892 Query 181488 TTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGTA 181547 ||||| || ||||||||||| || ||||| || || |||||||| || || || |||||| Sbjct 5168893 TTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTA 5168952 Query 181548 TTTGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGT 181607 || || ||||| || || ||||| ||||| ||||||||||| || ||| | || | Sbjct 5168953 TTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGG 5169012 Query 181608 GAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACA 181667 || || || |||| ||| || || | ||||||| |||||| ||||||||||| || Sbjct 5169013 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACT 5169072 Query 181668 TACAACATCGTCGCCGCCCACGGTTACTTTGGTCGCTTGATCTTCCAATATGCTTCATTC 181727 || || ||||| ||||| || ||||| ||||| || || ||||||||||||||| ||| Sbjct 5169073 TATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTC 5169132 Query 181728 AACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAG 181773 |||||||| ||||| | ||||||||||| || || |||||||||| Sbjct 5169133 AACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAG 5169178 >seq36 Length=917149 Score = 143 bits (158), Expect = 3e-29 Identities = 193/266 (73%), Gaps = 2/266 (1%) Strand=Plus/Minus Query 181002 ACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCA 181061 ||| | ||||| || || | || ||||| || || ||||||| || ||| | ||| | Sbjct 329976 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 329917 Query 181062 GCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCAT 181120 |||||| ||||| || || |||||||| | || ||| || || || || || || || Sbjct 329916 GCAACT-TCTGTATTTATTATCGCCTTCATTGCCATTCCTCCAGTAGATATTGATGGTAT 329858 Query 181121 CCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGT 181180 |||||||| || | || || || | ||||| ||||| || || || ||||| || | Sbjct 329857 TCGTGAACCTGTTTCAGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGCCATTAT 329798 Query 181181 TCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGA 181240 ||| |||| || || ||| | ||||| ||||| ||||||||||| || || |||| Sbjct 329797 TCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAATCTGGGAAGCGGCTTCTGTTGA 329738 Query 181241 TGAGTGGCTGTATAACGGTGGTCCTT 181266 ||| ||| | || ||||||||||||| Sbjct 329737 TGAATGGTTATACAACGGTGGTCCTT 329712 >seq4826 Length=244980 Score = 132 bits (146), Expect = 6e-26 Identities = 147/196 (75%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 183178 TTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATTAGAGCAGCAG 183237 |||| || || || || || || || ||||| || || ||| || ||| | || |||| Sbjct 499 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 440 Query 183238 AAGATCCTGAGTTCGAGACGTTCTACACAAAGAACATCCTTCTCAATGAAGGACTACGTG 183297 |||||||||| || ||||| ||||||||||| || || || | || ||||| | |||| Sbjct 439 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 380 Query 183298 CTTGGTTGGCACCTGCCGATCAACCACATGAAAACTTCATCTTCCCTGAAGAAGTTCTAC 183357 ||||| |||| || ||||| || ||||||||| | || |||||||| || ||||||| Sbjct 379 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTAC 320 Query 183358 CTAGAGGTAACGCACT 183373 | | || ||||| || Sbjct 319 CCCGTGGAAACGCTCT 304 >seq1731 Length=31681 Score = 129 bits (142), Expect = 7e-25 Identities = 146/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 183178 TTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATTAGAGCAGCAG 183237 |||| || || || || || || || ||||| || || ||| || ||| | || |||| Sbjct 4297 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 4238 Query 183238 AAGATCCTGAGTTCGAGACGTTCTACACAAAGAACATCCTTCTCAATGAAGGACTACGTG 183297 |||||||||| || ||||| ||||||||||| || || || | || ||||| | |||| Sbjct 4237 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 4178 Query 183298 CTTGGTTGGCACCTGCCGATCAACCACATGAAAACTTCATCTTCCCTGAAGAAGTTCTAC 183357 ||||| |||| || ||||| || ||||||| | | || |||||||| || ||||||| Sbjct 4177 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAACCCTTATATTCCCTGAGGAGGTTCTAC 4118 Query 183358 CTAGAGGTAACGCACT 183373 | | || ||||| || Sbjct 4117 CCCGTGGAAACGCTCT 4102 >seq3 Length=50312079 Score = 116 bits (128), Expect = 5e-21 Identities = 144/196 (73%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 183178 TTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATTAGAGCAGCAG 183237 |||| || || || || || || || ||||| || || |||||| ||| | || |||| Sbjct 24072548 TTGGTCTAGCCCTGAACCTCCGCGCCTATGACTTCGTTCCTCAAGAAATTCGCGCGGCAG 24072489 Query 183238 AAGATCCTGAGTTCGAGACGTTCTACACAAAGAACATCCTTCTCAATGAAGGACTACGTG 183297 |||||||||| || |||| || ||||||| || || || | || ||||| | |||| Sbjct 24072488 AAGATCCTGAATTTGAGATTTTTGACACAAA-AATATTCTCTTAAACGAAGGTATTCGTG 24072430 Query 183298 CTTGGTTGGCACCTGCCGATCAACCACATGAAAACTTCATCTTCCCTGAAGAAGTTCTAC 183357 ||||| |||| || ||||| || ||||||||| | || |||||||| | ||||||| Sbjct 24072429 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGGGGTTCTAC 24072370 Query 183358 CTAGAGGTAACGCACT 183373 | | || ||||| || Sbjct 24072369 CCCGTGGAAACGCTCT 24072354 Score = 105 bits (116), Expect = 8e-18 Identities = 143/197 (73%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 183178 TTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATTAGAGCAGCAG 183237 |||| || || || || | || || ||||| || || ||| | ||| | || |||| Sbjct 34945760 TTGGTCTAGCCCTGAACCCGCGCGCCTATGACTTCGTTTCTCAGAAAATTCGCGCGGCAG 34945819 Query 183238 AAGATCCTGAGTTCGAGACGTTCTACACAAAGAACATCCTTCTCAATGAAGGACTACGTG 183297 |||||||||| || ||||| ||||||||||| || || || | || ||||| | |||| Sbjct 34945820 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 34945879 Query 183298 CTTGGTTGGCACCTGCCGATCAACCACATGAAA-ACTTCATCTTCCCTGAAGAAGTTCTA 183356 ||||| |||| || ||||| | ||||||| |||| || |||||||| || |||| Sbjct 34945880 CTTGGATGGCGGCTCAAGATCAGACTCATGAAAGACTT-ATATTCCCTGAGGAGTATCTA 34945938 Query 183357 CCTAGAGGTAACGCACT 183373 || | || ||||| || Sbjct 34945939 CCCCGTGGAAACGCTCT 34945955 >seq4 Length=35924511 Score = 114 bits (126), Expect = 2e-20 Identities = 181/257 (70%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 181715 ATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGT 181774 ||||||| ||||||||||| ||||| | ||||||||||| || || ||||||||| | Sbjct 4757218 ATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAAT 4757277 Query 181775 TGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAA 181834 | |||||||| || || | || | ||||| ||| | || ||||| |||| ||||| Sbjct 4757278 AAGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGACTTTCAACCTAAATGATTTCAA 4757337 Query 181835 CTTCAACCAGTCTATCCTCGACGGACAAGGACGTGTCCTCAACACCTGGGCAGACGTGCT 181894 |||||||| ||| | | || | |||| |||| | || || || || || | | Sbjct 4757338 TTTCAACCAATCTGTAGTTGATAGTCAAGCCTGTGTAATTAATACTTGAGCTGATATCAT 4757397 Query 181895 CAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCCCGCT 181954 ||||| || ||| || | ||||| |||| ||| | || || || |||||| | || Sbjct 4757398 TAACCGCGCTAATCTTGGTAAAGAAGTTATGCTCGAACATAATGCTCATAACTTCTCTCT 4757457 Query 181955 TGATCTTGCAGCAGCTG 181971 || ||| ||| |||| Sbjct 4757458 AGA-CTT--AGCTGCTG 4757471 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 7/215 (3%) Strand=Plus/Minus Query 182630 GTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCTCTCATTGG 182689 ||| ||| | || || | |||| ||| || || || || ||||| |||| || || | Sbjct 12713499 GTGTCAATTAGGTGGTGTGTGGACTTTTGTTGCCCTTCATGGTGCTTTCGGACTAATAGC 12713440 Query 182690 TTTCATGCTTAGGCAATTTGAACTTGCTCGCCTGATTGG----AATCAGACCTTACAATG 182745 || |||| | | ||||| |||||| | || |||| || | | ||||||| |||| Sbjct 12713439 TT-CATGTTATGTCAATTCGAACTTAATTGCTTGATCGGTTCAATTGCGACCTTATAATG 12713381 Query 182746 CGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTTCCTCATCTATCCTTTGG 182805 | || || ||||||||||| |||| ||| || || ||| ||||| || ||||| | Sbjct 12713380 CAATCGCGTTTTCTGGTCCGATTGTTGTTTTTGTTTATGTATTCCTGATTTATCCACTAT 12713321 Query 182806 GACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGT 182840 |||| || ||| || || |||| || |||||| Sbjct 12713320 GACAATCTGGTTGATTCTTTGCGCAGT--TTTGGT 12713288 >seq1 Length=51465339 Score = 100 bits (110), Expect = 3e-16 Identities = 173/252 (69%), Gaps = 17/252 (7%) Strand=Plus/Plus Query 181638 GGTTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCCACGGTTACTTT 181697 ||||||| |||||| ||||||||||| | | || ||||| || | || ||||| || Sbjct 27733156 GGTTACAGGTTCGGGCAAGAAGAAGAAGCTTGTAATATCGTACCCACTCATGGTTATATT 27733215 Query 181698 GGTCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTC 181757 ||||| || || ||||||| |||| ||||||||||| | ||| | |||||||||| Sbjct 27733216 GGTCGATTAATATTCCAATCTGCTAGTTTCAACAACTCTCATTCTTTACACTTCTTCC-- 27733273 Query 181758 GCAGCATGGCCTGTAGTTGGAATCTGGTTCAC-CGCACTGGGCGTAAGCACCATGGCATT 181816 ||||| | |||||||| || || || | ||||| ||||| || Sbjct 27733274 -------------TAGTT-GTATCTGGTTTACTAGCTTAAGGTATCAGCACTATGGCTTT 27733319 Query 181817 TAACCTCAATGGATTCAACTTCAACCAGTCTATCCTCGACGGACAAGGACGTGTCCTCAA 181876 || || ||||| |||| |||||||| ||| | | || | |||| |||| | || Sbjct 27733320 CAATCTAAATGGTTTCAGTTTCAACCAATCTGTAGTTGATAGTCAAGACTGTGTAATTAA 27733379 Query 181877 CACCTGGGCAGA 181888 || ||||| || Sbjct 27733380 TACTTGGGCTGA 27733391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614580523193280