Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq4825 596 2e-165 seq6 403 2e-107 seq8 345 5e-90 seq4 140 4e-28 seq36 134 2e-26 seq4826 123 3e-23 seq1731 120 3e-22 seq1 118 1e-21 seq3 107 2e-18 >seq4825 Length=155848 Score = 596 bits (660), Expect = 2e-165 Identities = 734/996 (74%), Gaps = 8/996 (1%) Strand=Plus/Minus Query 158379 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 158438 ||||| | ||| |||| ||| | ||||| || || | || ||||| || || || Sbjct 1277 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1218 Query 158439 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 158497 ||||| || ||| | ||| | ||||| ||||| || || |||||||| | |||||||| Sbjct 1217 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 1159 Query 158498 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 158557 || || || || || || || |||||||| || |||| || || | ||||| ||||| Sbjct 1158 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACAA 1099 Query 158558 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 158617 || || || ||||| || | || |||| || || ||| | ||||| ||||| || Sbjct 1098 TATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAAT 1039 Query 158618 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 158677 ||||||||| || || ||||||| ||| | || ||||||||||||| || | | || Sbjct 1038 CTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGTCCTTATGAATTAATCGT 979 Query 158678 CTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTTTCATACCG 158737 | ||||| | | || | | || ||||| ||||| ||||| ||| | ||| Sbjct 978 TCTACACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCG 919 Query 158738 CTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCACCAGTCGCTGCAGCATCTGC 158797 |||||||||| || ||||| ||| |||||||| || || || || || || |||| Sbjct 918 TCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 859 Query 158798 TGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 158857 ||| ||| | |||| || |||||||||| || || |||| ||||||||| || || Sbjct 858 TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAAT 799 Query 158858 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCC 158917 |||||||||||| |||| |||| |||||||||| || || |||||||||||||||||||| Sbjct 798 CTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 739 Query 158918 GTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 158977 || || ||| | || || ||||| |||||||| || || || || |||||||||||| Sbjct 738 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGG 679 Query 158978 AAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTATG 159036 | | || || || | | | || | ||||| || |||| || || || | | Sbjct 678 TTCTTTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 620 Query 159037 GTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACTTCG 159096 |||||| |||||| |||||||||||||| ||||||||||| || || |||||||| || | Sbjct 619 GTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 560 Query 159097 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTG 159156 | || || ||||||||||| ||| ||||||||||| ||||| || ||||||||||| | Sbjct 559 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAG 500 Query 159157 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCATT 159214 |||| |||||||| || || |||||||| || || | || | ||| || ||||| || Sbjct 499 CTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGG--TATCAGCACTATGGCTTT 442 Query 159215 CAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAA 159274 |||||| || |||||||| |||||||| || | ||||| |||| || ||||| | || Sbjct 441 CAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAA 382 Query 159275 CACCTGGGCAGATGTACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAA 159334 || ||||| ||| | | ||||| || || ||||||||||||||||| || ||||| Sbjct 381 TACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCACGAACGTAA 322 Query 159335 CGCACACAACTTCCCACTCGACCTTGCTGCTGCTGA 159370 || || |||||||| || ||| | ||||||| ||| Sbjct 321 TGCTCATAACTTCCCTCTAGACTTAGCTGCTGTTGA 286 Score = 520 bits (576), Expect = 1e-142 Identities = 734/1022 (72%), Gaps = 8/1022 (1%) Strand=Plus/Plus Query 159899 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 159958 ||||| || | || |||||| | |||| |||||||||||||| || ||||| || Sbjct 33139 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGT 33198 Query 159959 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGAACAACTTTC 160018 || | || |||| ||| ||| | ||| | || || ||| | || || ||||| || Sbjct 33199 CTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGAGGCTGGTTCACAGGTACAACCTTT 33258 Query 160019 GCAACGAGCTGGTATACCCATGGACTCGCTAGTTCCTATCTTGAGGG-TGCAAACTTTCT 160077 | ||| ||||||||||||||| | || ||||||||| | || || ||||| ||||| Sbjct 33259 GTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAA--TTTCT 33316 Query 160078 TA-CAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGG 160135 || | || ||||| ||||| ||| | | | | |||||| || || || || ||| Sbjct 33317 TAACTGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACATTCT-TTGTTGTTACTGTGG 33375 Query 160136 GGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGAATTTT 160195 |||||||| || ||||||||||| | ||| ||| | || || || |||| |||| Sbjct 33376 GGTCCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTT 33435 Query 160196 GTGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCA 160255 || || ||||||||||| |||| ||||| || |||||| | ||||| || ||||| || Sbjct 33436 GTTGCCCTCCATGGTGCTTTCGGACTAATAGGCTTCATGTTACGTCAATTCGAACTTGCT 33495 Query 160256 CG-TCTCATCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTCTT 160314 || ||| || | | || ||||| ||||| || ||||| |||||||| |||||||| || Sbjct 33496 CGATCTGTTCAAT-TGCGACCTTATAATGCAATCGCGTTTTCTGGTCCAATTGCTGTTTT 33554 Query 160315 TGTCAGCGTATTCCTCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTT 160374 ||| |||||||| || || ||| | || || || ||||||| || || || || Sbjct 33555 TGTTTCTGTATTCCTGATTTATCCACTAGGACAATCTGGTTGGTTCTTTGCGCCAAGTTT 33614 Query 160375 TGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACGCT 160434 ||| || ||||| || ||| ||||| | | || ||||||||||||| || ||||| | Sbjct 33615 TGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACATT 33674 Query 160435 TAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCCAT 160494 ||||| || ||||||||||||||||| || || | || | || |||| | || || Sbjct 33675 AAACCCATTTCATATGATGGGAGTTGCAGGGGTATTGGGCGCTGCTTTGCTATGCGCTAT 33734 Query 160495 CCATGGCGTTACTGTAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTTTAA 160554 ||||| | ||||||||| || || | | ||||||||| || |||||||| || Sbjct 33735 TCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCG 33794 Query 160555 GGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTG 160614 || ||| | | || || | ||||| |||||||| |||||||| || |||||||| || Sbjct 33795 TGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCGAACCGCTTTTG 33854 Query 160615 GTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTT 160674 ||| || ||||| || |||| ||||| || || || ||| | ||||| || ||||| || Sbjct 33855 GTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 33914 Query 160675 TGTGCCTGTTATGGGTCTTTGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCT 160734 ||| || || | ||| | |||| | |||| | ||||||| || || || || Sbjct 33915 TGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCT 33974 Query 160735 TCGTGCTTACGATTTCGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCAGAATTTGAGAC 160794 || || || || ||||| ||| || ||| | || ||||||||||| ||||||||||| Sbjct 33975 GCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAGAAGATCCTGAATTTGAGAC 34034 Query 160795 CTTCTACACCAAGAACATCCTACTGAATGAAGGACTACGTGCATGGTTAGCACCTGCCGA 160854 |||||||| || || || || | || ||||| | ||||| ||| | || || || Sbjct 34035 TTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGA 34094 Query 160855 CCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTA 160914 || || ||||| ||| |||| ||||| || || ||||| || | || ||||| ||||| Sbjct 34095 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTA 34154 Query 160915 AT 160916 || Sbjct 34155 AT 34156 >seq6 Length=36610139 Score = 403 bits (446), Expect = 2e-107 Identities = 454/602 (75%), Gaps = 7/602 (1%) Strand=Plus/Plus Query 158722 GGGAACTTTCATACCGCTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCACCAG 158781 |||| ||| | ||| |||||||||| || ||||| ||| |||||||| || || | Sbjct 34152494 GGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTG 34152553 Query 158782 TCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATG 158841 | || || || ||||||| ||| | |||| || |||||||||| || || |||| Sbjct 34152554 TTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATG 34152613 Query 158842 CTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACA 158901 ||||||||| || |||||||||||||| |||| |||| |||||||||| || || |||| Sbjct 34152614 GTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACA 34152673 Query 158902 ACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTT 158961 |||||||||||||||| || || ||| | || || ||||| |||||||| || || || | Sbjct 34152674 ACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTAT 34152733 Query 158962 TCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACA 159020 | |||||||||||| | | || || | || | | || | ||||| || |||| Sbjct 34152734 TTAGTGCTATGCATGGTTCTTTGGTAACCT-CTAGTTTGATCAGGGAAACCACAGAAAAT 34152792 Query 159021 GAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCA 159080 || || || | ||||||| |||||| |||||||||||||| ||||||||||| || Sbjct 34152793 GAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCC 34152852 Query 159081 GCCCATGGTTACTTCGGT-CGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTC 159139 || |||||||| || ||| || || ||||||||||| ||| ||||||||||| ||||| Sbjct 34152853 GCTCATGGTTATTTTGGTCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTC 34152912 Query 159140 CTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGT 159199 || ||||||||||| ||||| |||||||| || || |||||||| || | ||| || Sbjct 34152913 TTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTG--CTTTAGGT 34152970 Query 159200 GTCA--ACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGT 159257 ||| || ||||| |||||||| || |||||||| |||||||| || | ||||| || Sbjct 34152971 ATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGT 34153030 Query 159258 CAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGTGCAGGTCTGGGTATGGAA 159317 || || ||||| | || || ||||| ||| | | ||||| || || |||||||| Sbjct 34153031 CAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAG 34153090 Query 159318 GT 159319 || Sbjct 34153091 GT 34153092 >seq8 Length=31745509 Score = 345 bits (382), Expect = 5e-90 Identities = 357/465 (77%), Gaps = 2/465 (0%) Strand=Plus/Plus Query 158706 TATATGGGACGTGAATGGGAACTTTCATACCGCTTAGGTATGCGCCCCTGGATCTGTGTA 158765 || ||||| ||||| ||||| ||| | ||| |||||||||| || ||||| ||| Sbjct 5168713 TACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTT 5168772 Query 158766 GCATATTCTGCACCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAA 158825 |||||||| || || || || || || ||||||| ||| | |||| || |||||||| Sbjct 5168773 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAA 5168832 Query 158826 GGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTA 158885 || || || |||| ||||||||| || |||||||||||||| |||| |||| ||||| Sbjct 5168833 GGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTA 5168892 Query 158886 TTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTA 158945 ||||| || || |||||||||||||||||||| || || ||| | || || ||||| ||| Sbjct 5168893 TTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTA 5168952 Query 158946 TTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTC-G 159004 ||||| || || || || |||||||||||| | | || || | || | | || | Sbjct 5168953 TTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCT-CTAGTTTGATCAG 5169011 Query 159005 TGAAACGACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAAC 159064 ||||| || |||| || || || | ||||||| |||||| |||||||||||||| Sbjct 5169012 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAAC 5169071 Query 159065 ATATAATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATT 159124 ||||||||||| || || |||||||| || || || || ||||||||||| ||| || Sbjct 5169072 TTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTT 5169131 Query 159125 CAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGT 159169 ||||||||| ||||| || ||||||||||| ||||| |||||||| Sbjct 5169132 CAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGT 5169176 >seq4 Length=35924511 Score = 140 bits (154), Expect = 4e-28 Identities = 182/250 (73%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 159123 TTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGG 159182 ||||||||||| ||||| || ||||||||||| ||||| |||||||| | | |||||| Sbjct 4757228 TTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAATAAGTATCTGG 4757287 Query 159183 TTCACCGCCCTTGGCGTGTCA--ACCATGGCATTCAACCTGAACGGTTTCAACTTCAACC 159240 || || | ||| || ||| || ||| | |||||||| || | |||||| ||||||| Sbjct 4757288 TTTACTG--CTTTAGGTATCAGCACTATGACTTTCAACCTAAATGATTTCAATTTCAACC 4757345 Query 159241 AGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGTG 159300 | || | ||||| |||| | |||| | || || || || ||| | | ||||| | Sbjct 4757346 AATCTGTAGTTGATAGTCAAGCCTGTGTAATTAATACTTGAGCTGATATCATTAACCGCG 4757405 Query 159301 CAGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTG 159360 | ||| |||| |||||||||| || | ||| || || |||||| | || ||| | | Sbjct 4757406 CTAATCTTGGTAAAGAAGTTATGCTCGAACATAATGCTCATAACTTCTCTCTAGACTTAG 4757465 Query 159361 CTGCTGCTGA 159370 |||||| ||| Sbjct 4757466 CTGCTGTTGA 4757475 >seq36 Length=917149 Score = 134 bits (148), Expect = 2e-26 Identities = 191/266 (72%), Gaps = 2/266 (1%) Strand=Plus/Minus Query 158400 ACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCA 158459 ||| | ||||| || || | || ||||| || || ||||||| || ||| | ||| | Sbjct 329976 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 329917 Query 158460 GCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCAT 158518 ||||| ||||| || || |||||||| | || ||| || || || || || || || Sbjct 329916 GCAACT-TCTGTATTTATTATCGCCTTCATTGCCATTCCTCCAGTAGATATTGATGGTAT 329858 Query 158519 CCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGT 158578 |||||||| || | || || || | ||||| ||||| || || || ||||| || | Sbjct 329857 TCGTGAACCTGTTTCAGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGCCATTAT 329798 Query 158579 ACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGA 158638 || |||| || || ||| | ||||| ||||| ||||||||||| || || |||| Sbjct 329797 TCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAATCTGGGAAGCGGCTTCTGTTGA 329738 Query 158639 TGAGTGGCTGTATAACGGTGGTCCTT 158664 ||| ||| | || ||||||||||||| Sbjct 329737 TGAATGGTTATACAACGGTGGTCCTT 329712 >seq4826 Length=244980 Score = 123 bits (136), Expect = 3e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 160716 TTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATTAGAGCAGCAG 160775 ||||||| || || || || || || || || ||||| ||| || ||| | || |||| Sbjct 499 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 440 Query 160776 AAGATCCAGAATTTGAGACCTTCTACACCAAGAACATCCTACTGAATGAAGGACTACGTG 160835 ||||||| ||||||||||| |||||||| || || || || | || ||||| | |||| Sbjct 439 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 380 Query 160836 CATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTC 160895 | ||| | || || || || || ||||| ||| |||| ||||| || || ||||| | Sbjct 379 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTAC 320 Query 160896 CTAGAGGCAACGCCCTTTAAT 160916 | | || ||||| ||||||| Sbjct 319 CCCGTGGAAACGCTCTTTAAT 299 >seq1731 Length=31681 Score = 120 bits (132), Expect = 3e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 160716 TTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATTAGAGCAGCAG 160775 ||||||| || || || || || || || || ||||| ||| || ||| | || |||| Sbjct 4297 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 4238 Query 160776 AAGATCCAGAATTTGAGACCTTCTACACCAAGAACATCCTACTGAATGAAGGACTACGTG 160835 ||||||| ||||||||||| |||||||| || || || || | || ||||| | |||| Sbjct 4237 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 4178 Query 160836 CATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTC 160895 | ||| | || || || || || ||||| | | |||| ||||| || || ||||| | Sbjct 4177 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAACCCTTATATTCCCTGAGGAGGTTCTAC 4118 Query 160896 CTAGAGGCAACGCCCTTTAAT 160916 | | || ||||| ||||||| Sbjct 4117 CCCGTGGAAACGCTCTTTAAT 4097 >seq1 Length=51465339 Score = 118 bits (130), Expect = 1e-21 Identities = 187/268 (70%), Gaps = 19/268 (7%) Strand=Plus/Plus Query 159036 GGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACTTC 159095 ||||||| |||||| |||||||||||| | | ||||||||| | | |||||||| | Sbjct 27733156 GGTTACAGGTTCGGGCAAGAAGAAGAAGCTTGTAATATCGTACCCACTCATGGTTATATT 27733215 Query 159096 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 159155 ||||| || || ||||||| ||| ||||||||||| | ||| || ||||||||||| Sbjct 27733216 GGTCGATTAATATTCCAATCTGCTAGTTTCAACAACTCTCATTCTTTACACTTCTTCCT- 27733274 Query 159156 GCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCAT 159213 ||||| |||||||| | | ||| || ||| || ||||| | Sbjct 27733275 -----------AGTTGT----ATCTGGTTTA-CTAGCTTAAGGTATCAGCACTATGGCTT 27733318 Query 159214 TCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGA 159273 |||| || || ||||||| |||||||| || | ||||| |||| | |||| | | Sbjct 27733319 TCAATCTAAATGGTTTCAGTTTCAACCAATCTGTAGTTGATAGTCAAGACTGTGTAATTA 27733378 Query 159274 ACACCTGGGCAGATGTACTGAACCGTGC 159301 | || ||||| ||| | |||||||| Sbjct 27733379 ATACTTGGGCTGATATCGATAACCGTGC 27733406 >seq3 Length=50312079 Score = 107 bits (118), Expect = 2e-18 Identities = 145/201 (72%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 160716 TTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATTAGAGCAGCAG 160775 ||||||| || || || || || || || || ||||| |||||| ||| | || |||| Sbjct 24072548 TTGGTCTAGCCCTGAACCTCCGCGCCTATGACTTCGTTCCTCAAGAAATTCGCGCGGCAG 24072489 Query 160776 AAGATCCAGAATTTGAGACCTTCTACACCAAGAACATCCTACTGAATGAAGGACTACGTG 160835 ||||||| |||||||||| || ||| ||| || || || | || ||||| | |||| Sbjct 24072488 AAGATCCTGAATTTGAGATTTTTGACA-CAAAAATATTCTCTTAAACGAAGGTATTCGTG 24072430 Query 160836 CATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTC 160895 | ||| | || || || || || ||||| ||| |||| ||||| || | ||||| | Sbjct 24072429 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGGGGTTCTAC 24072370 Query 160896 CTAGAGGCAACGCCCTTTAAT 160916 | | || ||||| ||||||| Sbjct 24072369 CCCGTGGAAACGCTCTTTAAT 24072349 Score = 93.3 bits (102), Expect = 5e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 160716 TTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATTAGAGCAGCAG 160775 ||||||| || || || | || || || || ||||| ||| | ||| | || |||| Sbjct 34945760 TTGGTCTAGCCCTGAACCCGCGCGCCTATGACTTCGTTTCTCAGAAAATTCGCGCGGCAG 34945819 Query 160776 AAGATCCAGAATTTGAGACCTTCTACACCAAGAACATCCTACTGAATGAAGGACTACGTG 160835 ||||||| ||||||||||| |||||||| || || || || | || ||||| | |||| Sbjct 34945820 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 34945879 Query 160836 CATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTC 160895 | ||| | || || || || | ||||| | |||| ||||| || || ||| | Sbjct 34945880 CTTGGATGGCGGCTCAAGATCAGACTCATGAAAGACTTATATTCCCTGAGGAGTATCTAC 34945939 Query 160896 CTAGAGGCAACGCCCTTTAAT 160916 | | || ||||| ||||||| Sbjct 34945940 CCCGTGGAAACGCTCTTTAAT 34945960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552440272030080