Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20
2016-05-24] 4,826 sequences; 421,502,825 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq6 136 2e-27
seq15 122 5e-23
seq2 113 3e-20
seq3 111 1e-19
seq1 107 1e-18
seq7 104 1e-17
seq4 91.5 9e-14
>seq6
Length=36610139
Score = 136 bits (150), Expect = 2e-27
Identities = 163/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||| | |||||| || ||| |||||||| || || |||| |||||| ||
Sbjct 34079799 AGACGGAGCACAAGATGGAGGGTAGACTCTTTTTGAATATTGTAGTCTGCAAGTGTGCGG 34079740
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| |||||||||||||| || |||||||| | | ||| ||||| || || | |||||
Sbjct 34079739 CCATCTTCAAGTTGTTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCCTCT 34079680
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| |||||| | ||| || || ||| ||||| ||||||||| || | ||
Sbjct 34079679 TTGTCTTGAATCTTT-GCTTTGACATTATCAATAGTGTCGGAGCTCTCCACCTCTAGCGT 34079621
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || || || |||||||||||||||||
Sbjct 34079620 GATGGTCTTTCCTGTCAAAGTCTTCACAAAAATCTGCAT 34079582
Score = 131 bits (144), Expect = 1e-25
Identities = 162/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||| | ||| || || ||| |||||||| || || |||| |||||| ||
Sbjct 34642247 AGACGGAGCACAAGATGAAGGGTAGACTCTTTTTGAATATTGTAGTCTGCAAGTGTGCGG 34642188
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| |||||||||||||| || |||||||| | | ||| ||||| || || | ||||||
Sbjct 34642187 CCATCTTCAAGTTGTTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCCTCC 34642128
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| ||| |||| ||| || || ||| ||||| ||||||||| || | ||
Sbjct 34642127 TTGTCT-TGAATCTTTGCTTTGACATTATCAATAGTGTCAGAGCTCTCCACCTCTAGCGT 34642069
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || || || |||||||| ||||||||
Sbjct 34642068 GATGGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCAT 34642030
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||||||||| | |||||| ||||| || || || ||||| || || || | |
Sbjct 34407670 CCACCTCTAAGACGGAGCACCAAGTGGAGGGTAGATTCTTTCTGAATATTGTAGTCAGCA 34407611
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || ||||| || ||||| ||||| || | | ||| ||||| || ||
Sbjct 34407610 AGGGTACGACCATCCTCAAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGG 34407551
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| || || || || ||| ||||| || || || |||||||||| |||||||||
Sbjct 34407550 ATGCCTTCTTTATCC-TGAATTTTTGCCTTCACATTATCAATTGTGTCTGAGCTCTCCAC 34407492
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || || || || || || || |||||||||||||||||
Sbjct 34407491 CTCCAAAGTAATTGTCTTTCCTGTCAATGTCTTCACAAAAATCTGCAT 34407444
Score = 118 bits (130), Expect = 7e-22
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || || | ||| |||||||| || ||| |||||||||||||| |||||||
Sbjct 34642028 CCACCCCTCAGCCTCAATACCAAATGAAGTGTGGATTCCTTTTGAATGTTGTAATCTGCC 34641969
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| ||| | |||| || | || || || |||||||| || | ||| || || || ||
Sbjct 34641968 AATGTCCTTCCGTCCTCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGATCTGGAGGA 34641909
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| |||||| |||||| |||| |||| ||||| | |||||| || |||||| ||
Sbjct 34641908 ATTCCCTCTTTGTCTTGGATC-TTTGCCTTAACATTGTCAATTGTATCAGAGCTCTCTAC 34641850
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|||| ||| || || || || || | ||| || ||||| || ||||||
Sbjct 34641849 CTCCAAGGTAATTGTCTTTCCAGTAAGCGTCTTGACAAAGATTTGCATG 34641801
Score = 111 bits (122), Expect = 1e-19
Identities = 158/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|| || | ||||||||| || || |||||| || |||||||| || | ||| || ||
Sbjct 34407205 AGGCGGAGCACCAAATGAAGGGTTGACTCCTTCTGGATGTTATAGTCAGCAAGAGTACGG 34407146
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||||||||| || || || ||||| || | | ||| |||||||| || | ||||||
Sbjct 34407145 CCGTCTTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCCGGTGGGATACCCTCC 34407086
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|| || ||||| | ||| || || ||| ||||| ||| || ||||| | |||
Sbjct 34407085 TTATCCTGAATCTTA-GCTTTGACATTATCAATAGTGTCAGAGCTTTCAACTTCTAAGGT 34407027
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| || || || || | || || |||||||||||||||
Sbjct 34407026 AATAGTCTTTCCAGTAAGGGTCTTAACAAAAATCTGCATG 34406987
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || || | ||| |||||||| |||||| ||||| |||||||| |||||||
Sbjct 34079580 CCACCCCTCAGCCTCAATACCAAATGAAGAGTGGATTCCTTCTGAATGTTGTAATCTGCC 34079521
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || | |||| || | || || || |||||||| || | ||| || || || ||
Sbjct 34079520 AAGGTCCTTCCGTCCTCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGATCTGGAGGA 34079461
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||||| |||| |||| ||||| | || || || |||||| ||
Sbjct 34079460 ATTCCCTCCTTGTCTTGGATC-TTTGCCTTAACATTGTCGATCGTATCGGAGCTCTCTAC 34079402
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| ||| || || || || || | || || ||||| || |||||
Sbjct 34079401 TTCCAAGGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAGATTTGCAT 34079354
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | || | || || ||| |||||| || ||||| || || |
Sbjct 34080036 CCACCACGAAGACGAAGAACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 34079977
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| | || || | || || || ||||| || ||||||||||| || || ||
Sbjct 34079976 AGGGTTCTTCCATCCTCCAACTGCTTTCCAGCAAAAATCAAACGCTGTTGATCTGGTGGG 34079917
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| |||||| ||||| ||| ||| | || ||| || |||||| ||| |||||| ||
Sbjct 34079916 ATTCCCTCTTTGTCCTGGAT-TTTCGCCTTCACGTTATCAATTGTATCTGAGCTCTCAAC 34079858
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| ||| || || || ||||| || || |||||||| || |||||
Sbjct 34079857 CTCCAAGGTGATGGTCTTGCCGGTCAATGTCTTCACAAAGATTTGCAT 34079810
Score = 105 bits (116), Expect = 4e-18
Identities = 157/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||||||||| || || ||||| || ||||| || || | ||| || ||
Sbjct 34641791 AGACGGAGCACCAAATGAAGGGTCGATTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGA 34641732
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
||||||| || || || || ||||| || | | ||| ||||| || || | ||||||
Sbjct 34641731 CCGTCTTCCAGCTGCTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCC 34641672
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| || | |||||| || ||| ||||| ||| || ||||| | |||
Sbjct 34641671 TTGTCCTGGATC-TTAGCTTTAACATTATCAATAGTGTCAGAGCTTTCAACTTCTAGGGT 34641613
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| || || || || | || || ||||| |||||||||
Sbjct 34641612 GATGGTCTTTCCAGTAAGTGTCTTAACAAAGATCTGCATG 34641573
Score = 96.9 bits (106), Expect = 2e-15
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||||||||| || || ||||| || || || || || | ||| || ||
Sbjct 34079343 AGACGGAGCACCAAATGAAGGGTTGATTCCTTCTGGATATTGTAGTCAGCAAGGGTGCGA 34079284
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
||||||| || || || || ||||| || | | ||| ||||| || || | ||||||
Sbjct 34079283 CCGTCTTCCAGCTGCTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCC 34079224
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| || | ||| || || ||| ||||| ||| || ||||| | |||
Sbjct 34079223 TTGTCCTGGATC-TTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCAACTTCTAGGGT 34079165
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| || || || || | || || ||||| |||||||||
Sbjct 34079164 GATTGTCTTGCCAGTAAGTGTCTTAACAAATATCTGCATG 34079125
Score = 91.5 bits (100), Expect = 9e-14
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| || ||| ||| || || ||||| || || | || |||| | || || | ||
Sbjct 34642460 TGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCCAGGGTTCTTCCATCCTCCAACTGC 34642401
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || ||||||||||| || || || | |||||| ||||| ||| |||
Sbjct 34642400 TTTCCAGCAAAAATCAAACGCTGTTGATCTGGTGGGATTCCCTCTTTGTCCTGGAT-TTT 34642342
Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| || || || |||||| ||| |||||| || |||| ||| || || || || ||
Sbjct 34642341 CGCCTTCACATTATCAATTGTATCTGAGCTCTCAACCTCCAAGGTGATGGTCTTGCCAGT 34642282
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
|| || |||||||| || |||||
Sbjct 34642281 CAATGTCTTCACAAAGATTTGCAT 34642258
Score = 84.2 bits (92), Expect = 1e-11
Identities = 155/222 (70%), Gaps = 8/222 (4%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG--AAAGTG-TT 34545
||||| | |||||||| || ||| ||||| ||||| ||||| || | ||||| ||
Sbjct 34406749 AGACGAAGAACCAAATGAAGGGTGGATTCCTTCTGAATATTATAGTCAGCTAAAGTCCTT 34406690
Query 34546 CGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCC 34605
| | || || || ||||| || ||||| || | | ||| || || || || | ||
Sbjct 34406689 C---CATCCTCGAGCTGTTTGCCCGCAAAGATAAGCCTCTGCTGATCGGGAGGGATGCCT 34406633
Query 34606 TCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCAC 34664
||||||||| ||||| | || || | |||||||| ||| || || || |
Sbjct 34406632 TCCTTGTCTTGAATCTTA-GCCTTGACATTGTCGATTGTGTCAGAGCTTTCAACCTCAAG 34406574
Query 34665 GGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||||| || || ||||| | ||||||||||| ||||||||
Sbjct 34406573 GGTTATGGTCTTTCCGGTAAGAGTTTTCACAAAGATCTGCAT 34406532
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || || | || ||||||||||| ||| ||||| ||||| || ||||| |
Sbjct 34407442 CCACCCCTCAGCCTCAGTACCAAATGGAGTGTGGATTCCTTCTGAATATTGTAATCAGCC 34407383
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| ||| | | || || | || || || ||||| || || | ||| |||||||| ||
Sbjct 34407382 AATGTCCTTCCATCCTCCAACTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGGG 34407323
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||| ||||||||| ||| ||||| || || | |||||| || || || ||
Sbjct 34407322 ATTCCTTCCTTGTCTTGGAT-TTTTGCCTTCACATTGTCAATTGTATCCGAACTTTCTAC 34407264
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | ||| || || || || || | || || ||||| || |||||
Sbjct 34407263 TTCAAGGGTGATTGTCTTCCCTGTGAGGGTCTTGACAAAGATTTGCAT 34407216
>seq15
Length=668940
Score = 122 bits (134), Expect = 5e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || | |||||||||||| | |||| | ||| |||||| || ||||| ||||| |
Sbjct 334918 GCCACCACGAAGACGCAACACAAGATGGTGTGTGGACTCCTTCTGGATGTTGTAATCAGC 334859
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || | |||| || | ||| ||||| ||||| || |||||||| ||||| |||||
Sbjct 334858 CAGGGTCCTGCCGTCCTCCAATTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGCGG 334799
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| || |||||||| |||| || | || ||| | ||| || ||| |||||| |
Sbjct 334798 AATACCTTCCTTGTCCTGGATC-TTAGCCTTCACGTTGTCAATGGTATCTGAGCTCTCAA 334740
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| | || || || || || || || || || ||||| ||||||||
Sbjct 334739 CTTCGAGAGTAATAGTCTTCCCTGTCAAGGTCTTGACAAAGATCTGCAT 334691
>seq2
Length=43913520
Score = 113 bits (124), Expect = 3e-20
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|||||||| ||||| || || ||| |||||| || || |||||||| | || || |
Sbjct 39748707 AGACGCAAGACCAAGTGAAGGGTGGACTCCTTCTGGATATTATAATCAGCCAGAGTCCTA 39748648
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || |||||||| || || ||||| || || | ||| || || || || | ||| |||
Sbjct 39748647 CCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGAGGAATTCCTTCC 39748588
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||||| | ||||| | ||| || ||| |||||||| || | |||
Sbjct 39748587 TTGTCCTGGATCTTC-GCCTTAACATTGTCAATGGTATCTGAACTCTCCACCTCTAGGGT 39748529
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| || || ||||| | || ||||| |||||||||||
Sbjct 39748528 TATAGTCTTGCCGGTCAGAGTCTTCACGAAAATCTGCAT 39748490
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||||||||| | |||||| || |||||| || ||||| || || | |
Sbjct 39748260 CCACCACGAAGACGCAACACAAGATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGCA 39748201
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || | |||| || | || ||||| || || || || | ||||||||| || ||
Sbjct 39748200 AGGGTCCTGCCGTCCTCCAACTGCTTACCAGCGAAGATCAACCTCTGTTGGTCTGGGGGA 39748141
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||| ||||||||| |||| || | || || | ||| || ||| ||||| ||
Sbjct 39748140 ATTCCTTCCTTGTCTTGGATC-TTGGCCTTGACATTGTCAATGGTATCTGAACTCTCAAC 39748082
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | ||| || || || || || || || || ||||||||||||||
Sbjct 39748081 TTCAAGGGTAATAGTCTTTCCTGTCAAGGTCTTGACAAAAATCTGCAT 39748034
Score = 102 bits (112), Expect = 5e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||| |||||| || ||| || |||||||| || |||| ||| || | | || ||
Sbjct 39748014 ACCAGATGGAGTGTTGACTCTTTCTGAATGTTGTAGTCTGCAAGAGTCCTGCCATCCTCC 39747955
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
||||| ||||| || || || || | ||| ||||| || || | ||| |||||||| |
Sbjct 39747954 AGTTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGG 39747895
Query 34618 ATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
||||| | ||| || | ||| || || |||||| || |||| ||| || || ||
Sbjct 39747894 ATCTTA-GCTTTCACATTGTCAATCGTATCCGAGCTCTCAACCTCCAGGGTAATAGTCTT 39747836
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || ||||||||||||||
Sbjct 39747835 GCCTGTCAAGGTCTTGACAAAAATCTGCAT 39747806
Score = 95.1 bits (104), Expect = 8e-15
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | || | |||||| ||| |||||| || ||||| || || | || || |
Sbjct 39747339 AGACGGAGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTCCTG 39747280
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| || || ||||| || || || | ||| || || || || || | || |||
Sbjct 39747279 CCATCTTCGAGCTGCTTACCAGCGAAAATAAGACGTTGCTGATCAGGAGGAATGCCTTCC 39747220
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||||| | ||| ||| | |||||||| || ||||| |||| |||
Sbjct 39747219 TTGTCCTGGATCTTG-GCTTTGACGTTGTCGATTGTGTCAGAACTTTCCACCTCCAAGGT 39747161
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| | ||||||||||| ||||||||
Sbjct 39747160 GATGGTCTTTCCGGTCAGAGTTTTCACAAAGATCTGCAT 39747122
Score = 95.1 bits (104), Expect = 8e-15
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||||||| | || || || |||||| || || || || |||| ||| || |
Sbjct 39748479 AGACGCAACACAAGGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCTGCAAGGGTCCTG 39748420
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || | || || || ||||| || |||||||| ||||| || || | || |||
Sbjct 39748419 CCATCCTCCAACTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGTGGGATGCCTTCC 39748360
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|| || ||| ||||| ||| ||| | ||| ||||| |||||| ||||| | |||
Sbjct 39748359 TTATC-CTGAATTTTTGCTTTGACGTTGTCAATAGTGTCAGAGCTCTCAACTTCAAGGGT 39748301
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || | || || ||||| ||||||||
Sbjct 39748300 GATTGTCTTCCCAGTCAGGGTCTTGACAAAGATCTGCAT 39748262
Score = 86.0 bits (94), Expect = 4e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||| |||||| || || || |||||||| ||||| | || ||||
Sbjct 39747795 AGACGGAGGACCAGATGGAGTGTTGATTCTTTCTGAATGTTGTAATCAGCTAGGGTTCTT 39747736
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| ||||| || ||||| ||||| || | | ||| ||||| || || | || |||
Sbjct 39747735 CCGTCCTCAAGCTGCTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATCCCTTCC 39747676
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|| || |||||| | ||| || | ||| || || |||||| || || | |||
Sbjct 39747675 TTATCCTGGATCTTA-GCTTTCACATTGTCAATAGTATCCGAGCTCTCAACCTCAAGGGT 39747617
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || || || || || |||||||||||
Sbjct 39747616 AATAGTCTTTCCTGTCAAGGTCTTGACGAAAATCTGCAT 39747578
>seq3
Length=50312079
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| ||||| | | ||| |||| ||| |||||| |||||||||||||| ||||| |
Sbjct 6143951 GCCACCTCTCAACCTCAATACCAGATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGC 6143892
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
| ||| | | || || | ||| ||||| ||||| || || | ||| ||||| || ||
Sbjct 6143891 CAATGTCCTACCATCCTCCAATTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGGGG 6143832
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||||| ||| ||| | ||| || | |||||| || || || |
Sbjct 6143831 AATTCCCTCCTTGTCT-TGAATTTTCGCTTTCACATTGTCAATTGTATCAGAACTTTCTA 6143773
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|||| | ||| ||||| || || || | || || ||||| || ||||||
Sbjct 6143772 CTTCAAGGGTAATCGTCTTCCCAGTGAGAGTCTTAACAAAGATTTGCATG 6143723
Score = 102 bits (112), Expect = 5e-17
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||||| ||| || || |||||||||||| || || || | ||||| ||
Sbjct 6144169 AGACGAAGCACCAGATGAAGGGTAGACTCCTTTTGAATATTGTAGTCGGCCAGTGTGCGG 6144110
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || || || || |||||||| | | ||| ||||| || || | || |||
Sbjct 6144109 CCATCCTCCAGCTGCTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCTTCC 6144050
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| ||| |||| ||| || || ||| |||||| |||||| || || | ||
Sbjct 6144049 TTGTC-CTGAATCTTTGCTTTCACATTATCAATGGTGTCTGAGCTCTCAACCTCAAGTGT 6143991
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| || || || || | || |||||||| |||||||||
Sbjct 6143990 GATAGTCTTCCCAGTCAGAGTCTTCACAAATATCTGCATG 6143951
Score = 100 bits (110), Expect = 2e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| |||||||| || || |||||| |||||||| ||||| | | || ||
Sbjct 6143485 AGACGCAGAACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCGGCCAAGGTCCGT 6143426
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || |||||||| ||||| || | | ||| ||||| || || | ||||||
Sbjct 6143425 CCATCCTCTAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCC 6143366
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| || | ||| || || ||| || || ||| || ||||| | ||
Sbjct 6143365 TTGTCCTGGATC-TTAGCTTTGACATTATCAATGGTATCAGAGCTTTCGACTTCTAGAGT 6143307
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || | || || ||||||||||||||
Sbjct 6143306 GATAGTCTTGCCAGTAAGTGTCTTTACAAAAATCTGCAT 6143268
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || | ||| || | |||||||||||| || ||||| || |||||||| || |
Sbjct 6143723 GCCACCGCGAAGGCGGAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTATAGTCAGC 6143664
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || ||| | ||||| || || || || ||||| || | | ||| ||||| || ||
Sbjct 6143663 AAGGGTACGCCCATCTTCGAGCTGCTTGCCAGCAAAAATGAGCCTCTGCTGGTCTGGTGG 6143604
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | ||| || || ||| || || || || |
Sbjct 6143603 GATACCCTCCTTGTCCTGGATC-TTAGCTTTGACATTATCAATAGTATCAGAACTTTCAA 6143545
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| | || || || || ||||| | || || || |||||||||||
Sbjct 6143544 CTTCTAGAGTGATAGTCTTTCCGGTAAGGGTCTTTACGAAAATCTGCAT 6143496
Score = 86.0 bits (94), Expect = 4e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| |||||||| || || |||||| |||||||| ||||| | | || ||
Sbjct 6143257 AGACGCAGAACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGCTAAGGTCCGT 6143198
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || || ||||| ||||| || | | ||| || || || || | || |||
Sbjct 6143197 CCATCCTCTAGCTGCTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAGGGATACCTTCC 6143138
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| ||||| | ||| || | ||| ||||| || || || || | |||
Sbjct 6143137 TTGTCTTGAATCTTC-GCTTTGACATTGTCAATAGTGTCCGAACTTTCAACCTCGAGGGT 6143079
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || | ||||||||||| ||||||||
Sbjct 6143078 GATTGTCTTGCCAGTAAGAGTTTTCACAAATATCTGCAT 6143040
>seq1
Length=51465339
Score = 107 bits (118), Expect = 1e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 34477 TCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCT 34536
|| || || | ||||||||||||||| || || || |||||| || || || ||||||
Sbjct 45561702 TCACCACCACGAAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATATTGTAATCT 45561643
Query 34537 GAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGC 34596
| ||| || | | || ||||| || ||||| ||||| || || | ||| || || ||
Sbjct 45561642 GCAAGGGTCCTTCCATCCTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGA 45561583
Query 34597 GGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTC 34655
|| | || ||||| || ||| || | || || || ||| ||||| ||||||
Sbjct 45561582 GGAATACCTTCCTTATC-CTGAATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTC 45561524
Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||||||| ||| || || || || || | || || ||||| ||||||||
Sbjct 45561523 CACTTCCAAGGTGATAGTCTTTCCAGTCAGAGTCTTAACAAAGATCTGCAT 45561473
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | |||||||||||||| |||||| || || || || || | |
Sbjct 45560559 CCACCACGAAGACGGAGGACCAAATGGAGAGTTGACTCCTTCTGGATATTGTAGTCGGCA 45560500
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || | ||||||||||||| || || || || || || | ||| ||||| || ||
Sbjct 45560499 AGGGTCCTGCCGTCTTCAAGTTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGA 45560440
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||| || ||| ||| | || ||| | |||||||| ||| || ||
Sbjct 45560439 ATGCCTTCCTTATCCTGGAT-TTTGGCCTTGACGTTGTCGATTGTGTCGGAGCTTTCGAC 45560381
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | ||| || || || ||||| | ||||||||||| || |||||
Sbjct 45560380 CTCAAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAGATTTGCAT 45560333
Score = 93.3 bits (102), Expect = 3e-14
Identities = 148/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
||||| |||||||| |||||| || ||||| || || | ||| || | | || |||
Sbjct 45560769 ACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATCCTCA 45560710
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
|| || ||||| ||||| || || | ||| ||||| || || | ||||||||||| |
Sbjct 45560709 AGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGG 45560650
Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
||| || | || || | || ||||| |||||| ||||| | ||| || || ||
Sbjct 45560649 ATC-TTGGCCTTGACATTGTCGATCGTGTCAGAGCTCTCGACTTCAAGGGTGATGGTCTT 45560591
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || || || ||||||||
Sbjct 45560590 CCCTGTCAAAGTCTTGACGAAGATCTGCAT 45560561
>seq7
Length=36358036
Score = 104 bits (114), Expect = 1e-17
Identities = 165/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537
||||||| | || || | || | ||||||||| |||||| || ||||| || || |
Sbjct 14364777 CGCCGCCGCGGAGGCGGAGAACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGG 14364718
Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597
|| |||| |||| || || || || ||||| || || | ||||| ||||||||||
Sbjct 14364717 CTAGGGTTCTGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCG 14364658
Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656
| | || || |||||| ||| || | ||| || | |||||||| | |||
Sbjct 14364657 GGATGCCTTCTTTGTCT-TGAATCTTGGCTTTGACATTGTCGATTGTGTCGGAGGATTCC 14364599
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
|| |||| ||| || ||||| ||||| | |||||||| || |||||||| |||
Sbjct 14364598 ACCTCCAGGGTGATAGTTTTGCCGGTGAGGGTTTTCACGAAGATCTGCATCTTG 14364545
>seq4
Length=35924511
Score = 91.5 bits (100), Expect = 9e-14
Identities = 159/229 (69%), Gaps = 8/229 (3%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||| | | ||||| || || || ||||||||| ||||| |||| |
Sbjct 33611085 CCACCACGAAGATGAAGAACCAAGTGAAGTGTTGACTCCTTTTGGATGTTGAAATCCGTT 33611144
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| || | || ||| | || ||||| |||||||| || | || ||||| | ||
Sbjct 33611145 AGTGTACGACCATCCTCATGCTGCTTACCTGCAAATATCAATCTCTACTGGTCTAGGGGA 33611204
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC--GATAAAATTGTGTCTTCGCTCTCCA 34657
| || ||||| ||| |||||| | || || |||| ||||| |||||| |
Sbjct 33611205 ATACCTTCCTTATCTTGGATCTTA-GCCTTGACTTGATA-----GTGTCGGAGCTCTCAA 33611258
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| |||| | || || |||||||| | |||||||||||||| |||||
Sbjct 33611259 CCTCCAACATAATGGTCTTACCGGTAAGGGTTTTCACAAAAATTTGCAT 33611307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314711088588458
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |