Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq4825 544 1e-149 seq6 369 4e-97 seq8 291 1e-73 seq5 158 1e-33 seq4 158 1e-33 seq1 114 2e-20 seq36 113 5e-20 >seq4825 Length=155848 Score = 544 bits (602), Expect = 1e-149 Identities = 695/955 (73%), Gaps = 2/955 (0%) Strand=Plus/Minus Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205 ||||| |||| ||||||||||| | ||||| || | | | || || | | ||| Sbjct 1243 TTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTC-TGTA 1185 Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265 ||||| | || || ||||| || || || || ||||| || |||||||| ||||| || Sbjct 1184 TTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTT 1125 Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325 | ||||||||||| ||||| ||||| || || || || || | | || | || Sbjct 1124 TCTGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGCCATTATTCCGACTTCTGCA 1065 Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385 || || || | ||||| || |||||||||||||| || | ||||| |||||| | ||| Sbjct 1064 GCTATAGGTTTGCACTTTTATCCAATCTGGGAAGCGGCTTCTGTTGATGAATGGTTATAC 1005 Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445 || || || || || || | | || | ||||| | | ||| | | ||||||| Sbjct 1004 AACGGTGGTCCTTATGAATTAATCGTTCTACACTTTTTACTTGGTGTAGCTTGTTACATG 945 Query 176446 GGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATAC 176505 || || | ||||| ||||||| | | ||||| ||||| |||||||| ||||||||| Sbjct 944 GGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTTGCATAT 885 Query 176506 TCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCT 176565 || || || || | || || | || |||||| | |||| ||| ||||||||||| Sbjct 884 TCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGC 825 Query 176566 TTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAA 176625 || ||||||||||||||||| || || || ||||| |||||||| ||| |||||||||| Sbjct 824 TTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAG 765 Query 176626 GCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGT 176685 || ||||||||||| || ||||||||||| || ||| | || ||||| ||||| || || Sbjct 764 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGC 705 Query 176686 GGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACA 176745 || || || || || ||||| || | | || || ||| | | || || || Sbjct 704 GGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACC 645 Query 176746 ACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAAC 176805 || ||||| ||||| || | ||||||| ||||| ||||||||||| || || || Sbjct 644 ACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAAT 585 Query 176806 ATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAAC 176865 || ||||| || || ||||| ||||| || | |||||||| |||||| |||||| ||| Sbjct 584 ATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTCAACAAC 525 Query 176866 TCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCA 176925 || | | | ||||||||||| || || | || || || | |||||||||||||| Sbjct 524 TCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCT 465 Query 176926 ATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTA 176985 | ||| | |||| ||||| |||||||| || |||||||| |||||||| ||||| | Sbjct 464 TTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTT 405 Query 176986 GACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGT 177045 || | || || ||| ||| |||| |||||| ||||||| || ||||||||| Sbjct 404 GATAGTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGT 345 Query 177046 ATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTG 177100 ||||||||||||||||| ||||||||||| |||||||| || ||| | ||||||| Sbjct 344 ATGGAAGTTATGCACGAACGTAATGCTCATAACTTCCCTCTAGACTTAGCTGCTG 290 Score = 158 bits (174), Expect = 1e-33 Identities = 221/310 (71%), Gaps = 0/310 (0%) Strand=Plus/Minus Query 19270 TTACTCTATCACATATGGGTAGAAGACCTGTAACAGTACAGTATCCTTACGAGAAACTCA 19329 ||||| |||||||| | || | ||||||||| | || ||||| ||||| ||| | | Sbjct 120695 TTACTTTATCACATGCGAGTCGTTTACCTGTAACTATTCAATATCCCTACGAAAAATTGA 120636 Query 19330 TACCGTCAGAGAGATACCGTGGTCGTATACACTATGAGTTTGACAAGTGTATCGCCTGTG 19389 | | || ||| | | ||| || || || |||| ||| ||||| || || || || |||| Sbjct 120635 TTACATCGGAGCGTTTCCGCGGCCGAATCCACTTTGAATTTGATAAATGCATTGCTTGTG 120576 Query 19390 AGGTGTGTGTAAGAGTATGCCCTATCAATCTACCAGTGGTGGATTGGGTGATGAACAAAC 19449 | || ||||| | ||||| ||||| ||||||| || || |||||| || | || Sbjct 120575 AAGTATGTGTTCGTGTATGTCCTATAGATCTACCTGTTGTAGATTGGAAATTGGAAAAGG 120516 Query 19450 AGACAAAGAAGAAAGAACTTAGAAATTATTCGATAGACTTTGGAGCATGTATTTTCTGCG 19509 | | | |||||| | | ||||| || || || ||| ||||| || || | Sbjct 120515 ATATTAGAAAGAAACGATTGCTTAATTACAGTATTGATTTCGGAATCTGTATATTTTGTG 120456 Query 19510 GTAACTGCGTAGAGTATTGCCCAACAAACTGTCTATCCATGACAGAAGAATATGAATTGG 19569 |||| ||||| |||||||| |||||||| ||| |||| ||||| |||||||||||| | Sbjct 120455 GTAATTGCGTTGAGTATTGTCCAACAAATTGTTTATCAATGACTGAAGAATATGAACTTT 120396 Query 19570 CTACATTTGA 19579 |||||| ||| Sbjct 120395 CTACATATGA 120386 >seq6 Length=36610139 Score = 369 bits (408), Expect = 4e-97 Identities = 442/599 (74%), Gaps = 1/599 (0%) Strand=Plus/Plus Query 176456 GGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAG 176515 |||| ||||||| | | ||||| ||||| |||||||| ||||||||| || || || | Sbjct 34152494 GGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTG 34152553 Query 176516 TATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATG 176575 | | || || | || |||||| | |||| ||| ||||||||||| || ||||||| Sbjct 34152554 TTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATG 34152613 Query 176576 GTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACA 176635 |||||||||| || || || ||||| |||||||| ||| |||||||||| || ||||||| Sbjct 34152614 GTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACA 34152673 Query 176636 ACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTT 176695 |||| || ||||||||||| || ||| | || ||||| ||||| || || || || || | Sbjct 34152674 ACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTAT 34152733 Query 176696 TCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACAACCGAAAACG 176755 | || ||||| || | | || || ||| | | || || || || ||||| | Sbjct 34152734 TTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATG 34152793 Query 176756 AATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTG 176815 |||| || | ||||||| ||||| ||||||||||| || || || || ||||| | Sbjct 34152794 AATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCG 34152853 Query 176816 CACACGGTTACTTTGGT-CGTCTTATCTTCCAGTATGCTTCTTTCAATAACTCAAGAAGT 176874 | || ||||| |||||| || | |||||||| |||||| |||||| ||||| | | Sbjct 34152854 CTCATGGTTATTTTGGTCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCT 34152913 Query 176875 CTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCAATGGGTGTT 176934 | ||||||||||| || || | || || || | |||||||||||||| | ||| | Sbjct 34152914 TTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATC 34152973 Query 176935 TGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCT 176994 |||| ||||| |||||||| || |||||||| |||||||| ||||| | || | Sbjct 34152974 AGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAA 34153033 Query 176995 GGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGT 177053 || || ||| ||| |||| |||||| ||||||| || |||||||||||||| || Sbjct 34153034 GGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAGGT 34153092 Score = 93.3 bits (102), Expect = 5e-14 Identities = 64/71 (90%), Gaps = 1/71 (1%) Strand=Plus/Plus Query 177030 CCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGA 177089 |||||||| |||||||||||||||||||||||| ||||||||||| |||||||| || || Sbjct 7295899 CCGTGCAA-CCTTGGTATGGAAGTTATGCACGAACGTAATGCTCATAACTTCCCTCTAGA 7295957 Query 177090 CCTTGCTGCTG 177100 | | ||||||| Sbjct 7295958 CTTAGCTGCTG 7295968 >seq8 Length=31745509 Score = 291 bits (322), Expect = 1e-73 Identities = 338/456 (74%), Gaps = 0/456 (0%) Strand=Plus/Plus Query 176439 TTACATGGGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGT 176498 ||||||||| || | ||||| ||||||| | | ||||| ||||| |||||||| ||| Sbjct 5168712 TTACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGT 5168771 Query 176499 TGCATACTCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCA 176558 |||||| || || || || | || || | || |||||| | |||| ||| ||||||| Sbjct 5168772 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCA 5168831 Query 176559 AGGATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGT 176618 |||| || ||||||||||||||||| || || || ||||| |||||||| ||| |||| Sbjct 5168832 AGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 5168891 Query 176619 ATTCCAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGT 176678 |||||| || ||||||||||| || ||||||||||| || ||| | || ||||| ||||| Sbjct 5168892 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGT 5168951 Query 176679 GTTTGGTGGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAG 176738 || || || || || || || ||||| || | | || || ||| | | || Sbjct 5168952 ATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAG 5169011 Query 176739 AGAGACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGAC 176798 || || || ||||| ||||| || | ||||||| ||||| ||||||||||| || Sbjct 5169012 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAAC 5169071 Query 176799 ATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTT 176858 || || || ||||| || || ||||| ||||| || | |||||||| |||||| ||| Sbjct 5169072 TTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTT 5169131 Query 176859 CAATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGC 176894 ||| ||||| | | | ||||||||||| || || Sbjct 5169132 CAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGC 5169167 Score = 86.0 bits (94), Expect = 8e-12 Identities = 117/161 (73%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205 ||||| |||| ||||||||||| | ||||| || | | | || || | | ||| Sbjct 2878719 TTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTC-TGTA 2878777 Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265 ||||| | || || ||||| || || || || ||||| || |||||||| ||||| || Sbjct 2878778 TTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTT 2878837 Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGC 176306 | ||||||||||| ||||| ||||| || || || || || Sbjct 2878838 TCTGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGC 2878878 >seq5 Length=41956025 Score = 158 bits (174), Expect = 1e-33 Identities = 221/310 (71%), Gaps = 0/310 (0%) Strand=Plus/Minus Query 19270 TTACTCTATCACATATGGGTAGAAGACCTGTAACAGTACAGTATCCTTACGAGAAACTCA 19329 ||||| |||||||| | || | ||||||||| | || ||||| ||||| ||| | | Sbjct 34364950 TTACTTTATCACATGCGAGTCGTTTACCTGTAACTATTCAATATCCCTACGAAAAATTGA 34364891 Query 19330 TACCGTCAGAGAGATACCGTGGTCGTATACACTATGAGTTTGACAAGTGTATCGCCTGTG 19389 | | || ||| | | ||| || || || |||| ||| ||||| || || || || |||| Sbjct 34364890 TTACATCGGAGCGTTTCCGCGGCCGAATCCACTTTGAATTTGATAAATGCATTGCTTGTG 34364831 Query 19390 AGGTGTGTGTAAGAGTATGCCCTATCAATCTACCAGTGGTGGATTGGGTGATGAACAAAC 19449 | || ||||| | ||||| ||||| ||||||| || || |||||| || | || Sbjct 34364830 AAGTATGTGTTCGTGTATGTCCTATAGATCTACCTGTTGTAGATTGGAAATTGGAAAAGG 34364771 Query 19450 AGACAAAGAAGAAAGAACTTAGAAATTATTCGATAGACTTTGGAGCATGTATTTTCTGCG 19509 | | | |||||| | | ||||| || || || ||| ||||| || || | Sbjct 34364770 ATATTAGAAAGAAACGATTGCTTAATTACAGTATTGATTTCGGAATCTGTATATTTTGTG 34364711 Query 19510 GTAACTGCGTAGAGTATTGCCCAACAAACTGTCTATCCATGACAGAAGAATATGAATTGG 19569 |||| ||||| |||||||| |||||||| ||| |||| ||||| |||||||||||| | Sbjct 34364710 GTAATTGCGTTGAGTATTGTCCAACAAATTGTTTATCAATGACTGAAGAATATGAACTTT 34364651 Query 19570 CTACATTTGA 19579 |||||| ||| Sbjct 34364650 CTACATATGA 34364641 >seq4 Length=35924511 Score = 158 bits (174), Expect = 1e-33 Identities = 221/310 (71%), Gaps = 0/310 (0%) Strand=Plus/Plus Query 19270 TTACTCTATCACATATGGGTAGAAGACCTGTAACAGTACAGTATCCTTACGAGAAACTCA 19329 ||||| |||||||| | || | ||||||||| | || ||||| ||||| ||| | | Sbjct 35920489 TTACTTTATCACATGCGAGTCGTTTACCTGTAACTATTCAATATCCCTACGAAAAATTGA 35920548 Query 19330 TACCGTCAGAGAGATACCGTGGTCGTATACACTATGAGTTTGACAAGTGTATCGCCTGTG 19389 | | || ||| | | ||| || || || |||| ||| ||||| || || || || |||| Sbjct 35920549 TTACATCGGAGCGTTTCCGCGGCCGAATCCACTTTGAATTTGATAAATGCATTGCTTGTG 35920608 Query 19390 AGGTGTGTGTAAGAGTATGCCCTATCAATCTACCAGTGGTGGATTGGGTGATGAACAAAC 19449 | || ||||| | ||||| ||||| ||||||| || || |||||| || | || Sbjct 35920609 AAGTATGTGTTCGTGTATGTCCTATAGATCTACCTGTTGTAGATTGGAAATTGGAAAAGG 35920668 Query 19450 AGACAAAGAAGAAAGAACTTAGAAATTATTCGATAGACTTTGGAGCATGTATTTTCTGCG 19509 | | | |||||| | | ||||| || || || ||| ||||| || || | Sbjct 35920669 ATATTAGAAAGAAACGATTGCTTAATTACAGTATTGATTTCGGAATCTGTATATTTTGTG 35920728 Query 19510 GTAACTGCGTAGAGTATTGCCCAACAAACTGTCTATCCATGACAGAAGAATATGAATTGG 19569 |||| ||||| |||||||| |||||||| ||| |||| ||||| |||||||||||| | Sbjct 35920729 GTAATTGCGTTGAGTATTGTCCAACAAATTGTTTATCAATGACTGAAGAATATGAACTTT 35920788 Query 19570 CTACATTTGA 19579 |||||| ||| Sbjct 35920789 CTACATATGA 35920798 Score = 141 bits (156), Expect = 1e-28 Identities = 186/257 (72%), Gaps = 8/257 (3%) Strand=Plus/Plus Query 176848 TATGCTTCTTTCAATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTT 176907 |||||| |||||| ||||| | | | ||||||||||| || || | || || | Sbjct 4757219 TATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAATA 4757278 Query 176908 TGCATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAAC 176967 | |||||||||||||| | ||| | |||| ||| | |||||||| || | |||||| Sbjct 4757279 AGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGACTTTCAACCTAAATGATTTCAAT 4757338 Query 176968 TTCAACCAGTCTG----TCTTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATAT 177023 |||||||| |||| | ||| ||| ||| || ||| ||| || | ||||| Sbjct 4757339 TTCAACCAATCTGTAGTTGATAGTCAAGCCTG----TGTAATTAATACTTGAGCTGATAT 4757394 Query 177024 CCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCC 177083 | ||||||| || || ||||||| |||||||||| ||| | ||||||||| |||||| | Sbjct 4757395 CATTAACCGCGCTAATCTTGGTAAAGAAGTTATGCTCGAACATAATGCTCATAACTTCTC 4757454 Query 177084 ACTTGACCTTGCTGCTG 177100 || ||| | ||||||| Sbjct 4757455 TCTAGACTTAGCTGCTG 4757471 >seq1 Length=51465339 Score = 114 bits (126), Expect = 2e-20 Identities = 228/338 (67%), Gaps = 45/338 (13%) Strand=Plus/Plus Query 176770 GGTTACAAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTT 176829 ||||||| ||||| ||||||||||| | | || || ||| | | || ||||| || Sbjct 27733156 GGTTACAGGTTCGGGCAAGAAGAAGAAGCTTGTAATATCGTACCCACTCATGGTTATATT 27733215 Query 176830 GGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAACTCAAGAAGTCTT--CACTTCTTCC 176887 ||||| | || ||||| | |||| |||||| ||||| | |||| |||||||||| Sbjct 27733216 GGTCGATTAATATTCCAATCTGCTAGTTTCAACAACTC--TCATTCTTTACACTTCTTCC 27733273 Query 176888 TTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACT-GCAATGGGTGTTTGCACAATGGCA 176946 | |||||| |||||||||||| || ||| | |||| ||||| Sbjct 27733274 T------------AGTTGT----ATCTGGTTTACTAGCTTAAGGTATCAGCACTATGGCT 27733317 Query 176947 TTCAACCTTAACGGTTTCAACTTCAACCAGTCTG----TCTTAGACAACTCTGGTAAAGT 177002 ||||| || || ||||||| |||||||| |||| | ||| ||| ||| || Sbjct 27733318 TTCAATCTAAATGGTTTCAGTTTCAACCAATCTGTAGTTGATAGTCAAGACTG----TGT 27733373 Query 177003 GATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGA 177062 ||| ||| |||| |||||| ||||||||| || ||||||| || Sbjct 27733374 AATTAATACTTGGGCTGATATCGATAACCGTGCTAAGCTTGGTA--------AT------ 27733419 Query 177063 GCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTG 177100 |||||||||| |||||||| || ||| | ||||||| Sbjct 27733420 --GTAATGCTCATAACTTCCCTCTAGACTTAGCTGCTG 27733455 >seq36 Length=917149 Score = 113 bits (124), Expect = 5e-20 Identities = 179/254 (70%), Gaps = 2/254 (1%) Strand=Plus/Minus Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205 ||||| |||| ||||||||||| | ||||| || | | | || || | | ||| Sbjct 329963 TTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTC-TGTA 329905 Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265 ||||| | || || ||||| || || || ||||| || |||||||| ||||| || Sbjct 329904 TTTATTATCGCCTTCATTGCCATTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTT 329845 Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325 ||||||||||||| ||||| ||||| || || || || || | | || | || Sbjct 329844 TCAGGATCTCTACTTTATGGCAACAATATTATTTCCGGTGCCATTATTCCGACTTCTGCA 329785 Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385 || || || | ||||| || |||||||||||||| || | ||||| |||||| | ||| Sbjct 329784 GCTATAGGTTTGCACTTTTATCCAATCTGGGAAGCGGCTTCTGTTGATGAATGGTTATAC 329725 Query 176386 AATGGAGGACCATA 176399 || || || || || Sbjct 329724 AACGGTGGTCCTTA 329711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603457994200320