Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq4825 672 0.0 seq6 437 1e-117 seq8 354 1e-92 seq4 185 1e-41 seq36 136 5e-27 seq1 136 5e-27 seq3 95.1 2e-14 seq2 87.8 2e-12 >seq4825 Length=155848 Score = 672 bits (744), Expect = 0.0 Identities = 749/995 (75%), Gaps = 4/995 (0%) Strand=Plus/Minus Query 183195 CTTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACT 183254 |||||| | ||||| |||||||| | ||||| || || | || |||||||| | Sbjct 1278 CTTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 1219 Query 183255 GATGATTCCAACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTC 183313 |||||| || ||| | ||| | ||||| |||| || || | |||||| | ||||||| Sbjct 1218 GATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTC 1160 Query 183314 CTCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACA 183373 |||| || || || || || || || ||||| ||| |||| || || | ||||| |||| Sbjct 1159 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACA 1100 Query 183374 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCA 183433 | || || || ||||| || |||| |||| || || || | ||||| ||||| | Sbjct 1099 ATATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAA 1040 Query 183434 TCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAG 183493 |||||||||| || || | ||||| ||| | || |||||||||||||| || | | | Sbjct 1039 TCTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGTCCTTATGAATTAATCG 980 Query 183494 TCTTCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACC 183553 | | ||||| | |||| || || |||||||||||||||||||| | || || Sbjct 979 TTCTACACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCC 920 Query 183554 GTCTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCG 183613 |||| |||||||| |||||||| |||||| ||| || |||||||| ||||| || | Sbjct 919 GTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 860 Query 183614 CTGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTA 183673 |||| ||| || |||| || |||||||||| ||| |||||||||||| || || | Sbjct 859 CTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAA 800 Query 183674 TCAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 183733 || ||| || || |||| ||| |||| ||||| || |||||||||||||| ||||||| Sbjct 799 TCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 740 Query 183734 CCTTCCACATGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACG 183793 | || |||||| | || || |||||||| ||||| ||||| || || ||||| ||||| | Sbjct 739 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCATG 680 Query 183794 GTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACTGAGTCTGAGTCACAGAACTAT 183852 ||||| |||| || || | | | | || | |||||||| || ||| || || | Sbjct 679 GTTCTTTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 621 Query 183853 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTT 183912 ||||||| |||||| ||||||||||| || || || || || || |||||||| || ||| Sbjct 620 GGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTT 561 Query 183913 GGTCGTCTGATCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTT 183972 || || | |||||||| |||||| || ||||| ||||||||| | ||||||||||| Sbjct 560 GGCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTA 501 Query 183973 GCTGCTTGGCCAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTT 184032 ||||||||||| || || || ||||||||||||||| | ||| | ||||||||||| || Sbjct 500 GCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGGCTTTC 441 Query 184033 AACCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAAC 184092 ||||| |||||||| || |||||||| || | ||||| ||||||| ||||| | || Sbjct 440 AACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAAT 381 Query 184093 ACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAAT 184152 || ||||| || | | ||||| ||| ||||| |||||||| |||||||| |||||| Sbjct 380 ACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCACGAACGTAAT 321 Query 184153 GCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 184187 ||||| ||||||||||| ||| | ||||||| ||| Sbjct 320 GCTCATAACTTCCCTCTAGACTTAGCTGCTGTTGA 286 Score = 504 bits (558), Expect = 9e-138 Identities = 718/1005 (71%), Gaps = 4/1005 (0%) Strand=Plus/Plus Query 185971 TGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGATTACTTCTTT 186030 ||||||||||| | | ||||| || || ||||| || ||||| || || | || | Sbjct 33149 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGTCTATTGCTCT 33208 Query 186031 TTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGCACAACGTTTGTTACGAGCT 186090 |||| ||| ||| | || | || |||||| | || || ||||| ||||| || | Sbjct 33209 TTCCTTGTGCCTATTTCGCTGTAGGAGGCTGGTTCACAGGTACAACCTTTGTAACTTCAT 33268 Query 186091 GGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGG-TGCTAATTTTCTCACGGCAGCA 186149 |||||||||| || ||||| ||| || | || || ||| ||||| | || || ||| Sbjct 33269 GGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGC-AATTTCTTAACTGCCGCA 33327 Query 186150 GTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 186209 || || ||||||||| | | | | |||||| | | |||| ||||||||||| | Sbjct 33328 GTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTGTGGGGTCCTGAAGCA 33387 Query 186210 CAAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCAC 186269 ||||| ||| | | || |||| ||| | || || || |||| |||||| || ||||| Sbjct 33388 CAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCCCTCCAT 33447 Query 186270 GGAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTTTGAAATCAGTCG-TCTCGTAGG 186328 || || || | || ||||| |||||| | || || || ||| | ||| ||| | Sbjct 33448 GGTGCTTTCGGACTAATAGGCTTCATGTTACGTCAATTCGAACTTGCTCGATCTGTTCAA 33507 Query 186329 TATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTATCGCTGTCTTTGTTAGTGTATT 186388 | | || || || ||||| || || ||||||||||| || ||||| |||||| |||||| Sbjct 33508 T-TGCGACCTTATAATGCAATCGCGTTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATT 33566 Query 186389 CCTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGCTCCCTCCTTTGGAGTCGCAGC 186448 ||| || || || || ||||| || |||||||| || || ||||| || ||||| Sbjct 33567 CCTGATTTATCCACTAGGACAATCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCAGC 33626 Query 186449 AATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAACTGGACGTTGAATCCATTCCA 186508 || ||| ||||| | | || | |||||||| || || ||||| || || ||||| || Sbjct 33627 TATATTTCGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACATTAAACCCATTTCA 33686 Query 186509 CATGATGGGTGTAGCAGGTATCCTTGGTGGTGCTCTGCTGTCAGCAATCCATGGTGTTAC 186568 |||||||| || ||||| | | || | |||| |||| | || || ||||||| ||| Sbjct 33687 TATGATGGGAGTTGCAGGGGTATTGGGCGCTGCTTTGCTATGCGCTATTCATGGTGCTAC 33746 Query 186569 TGTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAACACATTCAAAGCATTCGATAC 186628 ||||||||||||| | | ||||||||| || ||||| |||||| || || | | Sbjct 33747 TGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCC 33806 Query 186629 GACGCAAGAAGAAGAAACCTATTCGATGGTCACTGCGAACAGATTCTGGTCACAGATCTT 186688 || |||| |||||||| ||||| |||||||| |||||| | || ||||| || ||||| Sbjct 33807 AACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCGAACCGCTTTTGGTCCCAAATCTT 33866 Query 186689 CGGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTTCATGCTCTTTGTTCCTGTTAT 186748 || |||| ||| |||||| |||||| | |||||||| ||| | ||||| || || | Sbjct 33867 TGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAAC 33926 Query 186749 GGGTCTTTGGACCTCTTCCATTGGCATTATTGGTCTTGCTCTTAACCTTCGTGCTTATGA 186808 ||| | |||| | | |||| | ||||||| || || ||||| || || ||||| Sbjct 33927 TGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTGCGCGCCTATGA 33986 Query 186809 CTTTGTAAGTCAGGAGGTGAGAGCAGCAGAGGATCCTGAGTTCGAGACGTTCTATACCAA 186868 ||| || |||||| | | || ||||| |||||||| || ||||| ||||| || || Sbjct 33987 CTTCGTTTCTCAGGAAATTCGCGCGGCAGAAGATCCTGAATTTGAGACTTTCTACACAAA 34046 Query 186869 GAATATCCTATTGAATGAAGGTCTACGTGCCTGGATGGCACCAGTGGATCAACCACATGA 186928 ||||| || || || |||||| | ||||| |||||||| | ||||| || ||||| Sbjct 34047 AAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGA 34106 Query 186929 AAACTTTGTATTTCCTGAAGAAGTGTTGCCAAGAGGCAACGCTCT 186973 |||| || |||| ||||| || || | || | || |||||||| Sbjct 34107 AAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 34151 >seq6 Length=36610139 Score = 437 bits (484), Expect = 1e-117 Identities = 454/591 (77%), Gaps = 3/591 (1%) Strand=Plus/Plus Query 183549 TTACCGTCTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGC 183608 || |||||| |||||||| |||||||| |||||| ||| || |||||||| ||||| Sbjct 34152504 TTTCCGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGC 34152563 Query 183609 AACCGCTGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCT 183668 || ||||| ||| || |||| || |||||||||| ||| |||||||||||| || Sbjct 34152564 TACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCT 34152623 Query 183669 GGGTATCAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGAT 183728 || ||| ||| || || |||| ||| |||| ||||| || |||||||||||||| || Sbjct 34152624 AGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTAT 34152683 Query 183729 GCACCCCTTCCACATGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAAT 183788 |||||| || |||||| | || || |||||||| ||||| ||||| || || ||||| || Sbjct 34152684 GCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTAT 34152743 Query 183789 GCACGGTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACTGAGTCTGAGTCACAGA 183847 ||| |||||| |||| || | || | | | || | |||||||| || ||| || | Sbjct 34152744 GCATGGTTCTTTGGTAACCT-CTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTA 34152802 Query 183848 ACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGAT 183907 | | ||||||| |||||| ||||||||||| || || || || || || |||||||| | Sbjct 34152803 ATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATGGTT 34152862 Query 183908 ACTTTGGT-CGTCTGATCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTC 183966 | |||||| || | |||||||| |||||| || ||||| ||||||||| | |||||| Sbjct 34152863 ATTTTGGTCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTC 34152922 Query 183967 TTCCTTGCTGCTTGGCCAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATG 184026 ||||| ||||||||||| || || || ||||||||||||||| | ||| | ||||||||| Sbjct 34152923 TTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATCAGCACTATG 34152982 Query 184027 GCATTTAACCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTC 184086 || || ||||| |||||||| || |||||||| || | ||||| ||||||| ||||| Sbjct 34152983 GCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTA 34153042 Query 184087 CTGAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTG 184137 | || || ||||| || | | ||||| ||| ||||| ||||| ||| Sbjct 34153043 ATTAATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAGGTG 34153093 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 184123 CTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTGCT 184182 ||||| |||||||| |||||||| ||||||||||| ||||||||||| ||| | |||||| Sbjct 7295908 CTTGGTATGGAAGTTATGCACGAACGTAATGCTCATAACTTCCCTCTAGACTTAGCTGCT 7295967 Query 184183 GCTGA 184187 | ||| Sbjct 7295968 GTTGA 7295972 >seq8 Length=31745509 Score = 354 bits (392), Expect = 1e-92 Identities = 361/468 (77%), Gaps = 2/468 (0%) Strand=Plus/Plus Query 183520 TGCTACATGGGTCGTGAGTGGGAATTGTCTTACCGTCTCGGTATGCGTCCTTGGATCTGT 183579 || |||||||||||||||||||| | || |||||| |||||||| |||||||| | Sbjct 5168710 TGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCT 5168769 Query 183580 GTTGCTTATAGCGCACCTGTTGCTGCTGCAACCGCTGTCTTCCTGGTCTATCCTTTCGGT 183639 ||||| ||| || |||||||| ||||| || ||||| ||| || |||| || ||||| Sbjct 5168770 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGT 5168829 Query 183640 CAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTATCAGTGGCACCTTTAACTATATGCTT 183699 ||||| ||| |||||||||||| || || ||| ||| || || |||| ||| || Sbjct 5168830 CAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATT 5168889 Query 183700 GTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGTGTCGCTGGT 183759 || ||||| || |||||||||||||| |||||||| || |||||| | || || |||||| Sbjct 5168890 GTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGT 5168949 Query 183760 GTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCCTCGCTGGTT 183819 || ||||| ||||| || || ||||| ||||| |||||| |||| || | || | | | | Sbjct 5168950 GTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCT-CTAGTTTGAT 5169008 Query 183820 C-GTGAAACCACTGAGTCTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGA 183878 | | |||||||| || ||| || || | ||||||| |||||| ||||||||||| Sbjct 5169009 CAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGA 5169068 Query 183879 GACCTACAACATTGTCGCTGCTCATGGATACTTTGGTCGTCTGATCTTCCAGTATGCTTC 183938 || || || || || || |||||||| || ||||| || | |||||||| |||||| Sbjct 5169069 AACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAG 5169128 Query 183939 GTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTGCTGCTTGGCCAGT 183986 || ||||| ||||||||| | ||||||||||| ||||||||||| || Sbjct 5169129 TTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGT 5169176 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 183195 CTTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACT 183254 |||||| | ||||| |||||||| | ||||| || || | || |||||||| | Sbjct 2878684 CTTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 2878743 Query 183255 GATGATTCCAACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTC 183313 |||||| || ||| | ||| | ||||| |||| || || | |||||| | ||||||| Sbjct 2878744 GATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTC 2878802 Query 183314 CTCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACA 183373 |||| || || || || || || || ||||| ||| |||| || || | ||||| |||| Sbjct 2878803 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACA 2878862 Query 183374 ACATCATCTCTGGTGCAGTTGTTCCTTCTTC 183404 | || || || ||||| || |||| |||| Sbjct 2878863 ATATTATTTCCGGTGCCATTATTCCGACTTC 2878893 >seq4 Length=35924511 Score = 185 bits (204), Expect = 1e-41 Identities = 195/257 (76%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 183931 TATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTGCTGCTTGGCCAGTGGTC 183990 |||||| || ||||| ||||||||| | ||||||||||| ||||||||||| || | Sbjct 4757219 TATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAATA 4757278 Query 183991 GGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTAACCTGAATGGTTTTAAC 184050 | ||||||||||||||| | ||| | ||||||||| | || ||||| |||| ||| || Sbjct 4757279 AGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGACTTTCAACCTAAATGATTTCAAT 4757338 Query 184051 TTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAACACCTGGGCAGACGTTCTC 184110 |||||||| || | ||||| |||||| |||| | || || || || || | | Sbjct 4757339 TTCAACCAATCTGTAGTTGATAGTCAAGCCTGTGTAATTAATACTTGAGCTGATATCATT 4757398 Query 184111 AACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTC 184170 ||||| ||| |||||| | ||||| |||| ||| | ||||||||| |||||| |||| Sbjct 4757399 AACCGCGCTAATCTTGGTAAAGAAGTTATGCTCGAACATAATGCTCATAACTTCTCTCTA 4757458 Query 184171 GACCTTGCTGCTGCTGA 184187 ||| | ||||||| ||| Sbjct 4757459 GACTTAGCTGCTGTTGA 4757475 >seq36 Length=917149 Score = 136 bits (150), Expect = 5e-27 Identities = 205/289 (71%), Gaps = 2/289 (1%) Strand=Plus/Minus Query 183195 CTTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACT 183254 |||||| | | ||| |||||||| | ||||| || || | || |||||||| | Sbjct 329998 CTTCTGTAACTAGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 329939 Query 183255 GATGATTCCAACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTC 183313 |||||| || ||| | ||| | ||||| |||| || || | |||||| | || || Sbjct 329938 GATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCCATTC 329880 Query 183314 CTCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACA 183373 |||| || || || || || || || ||||| ||| | || || || | ||||| |||| Sbjct 329879 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCAGGATCTCTACTTTATGGCAACA 329820 Query 183374 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCA 183433 | || || || ||||| || |||| |||| || || || | ||||| ||||| | Sbjct 329819 ATATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAA 329760 Query 183434 TCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTA 183482 |||||||||| || || | ||||| ||| | || |||||||||||||| Sbjct 329759 TCTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGTCCTTA 329711 >seq1 Length=51465339 Score = 136 bits (150), Expect = 5e-27 Identities = 230/336 (68%), Gaps = 33/336 (10%) Strand=Plus/Plus Query 183853 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTT 183912 ||||||| |||||| ||||||||||| | | || || || | ||||||| || || Sbjct 27733156 GGTTACAGGTTCGGGCAAGAAGAAGAAGCTTGTAATATCGTACCCACTCATGGTTATATT 27733215 Query 183913 GGTCGTCTGATCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTT 183972 ||||| | || ||||| | |||| || ||||| |||| |||| | ||||||||||| Sbjct 27733216 GGTCGATTAATATTCCAATCTGCTAGTTTCAACAACTCTCATTCTTTACACTTCTTCCT- 27733274 Query 183973 GCTGCTTGGCCAGTGGTCGGCATCTGGTTTACT-GCTCTTGGTGTTAGCACTATGGCATT 184031 ||| || |||||||||||| ||| ||| | ||||||||||| || Sbjct 27733275 -----------AGTTGT----ATCTGGTTTACTAGCTTAAGGTATCAGCACTATGGCTTT 27733319 Query 184032 TAACCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAA 184091 || || |||||||| | |||||||| || | ||||| |||||| |||| | || Sbjct 27733320 CAATCTAAATGGTTTCAGTTTCAACCAATCTGTAGTTGATAGTCAAGACTGTGTAATTAA 27733379 Query 184092 CACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAA 184151 || ||||| || | ||||||||| |||| || || |||| Sbjct 27733380 TACTTGGGCTGATATCGATAACCGTGCTAAGCTTG--------GTAAT--------GTAA 27733423 Query 184152 TGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 184187 |||||| ||||||||||| ||| | ||||||| ||| Sbjct 27733424 TGCTCATAACTTCCCTCTAGACTTAGCTGCTGTTGA 27733459 >seq3 Length=50312079 Score = 95.1 bits (104), Expect = 2e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 170979 TTTGAATGTGCTGAAGATCAATATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTG 171038 ||||| |||||| ||| || || || |||||||| || || || ||| | || | Sbjct 44684224 TTTGAGGCTGCTGATGATTGCTACATCCTGGATGCTGCAGAGGAGGCTGGAGTGGAACTC 44684283 Query 171039 AACTATTCGTGTCGTGCTGGTGCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCT 171098 ||||| || | || ||||| || || |||||||||||||| || | || ||| Sbjct 44684284 CCATATTCTTGCAGGGCAGGTGCCTGCTCTACCTGTGCTGGGAAGATCGTTGAAGGCTCT 44684343 Query 171099 GTTGATCAATCCGATCAATCTTTCCTTGATGATGATCAGATTGAATCAGGTTTCATTCTG 171158 ||||| || | ||| ||| ||||| |||||| | || || | | |||| | | || Sbjct 44684344 GTTGACCAGGCTGATGGATCCTTCCTAGATGATAACCAAATGGGAGAGGGTTACTTGCTA 44684403 Query 171159 ACCTGCGTCTCATATCCTACAAGTGATTGTGTAAT 171193 ||||||||||| || || | | ||||||||| || Sbjct 44684404 ACCTGCGTCTCCTACCCGAAAGCTGATTGTGTCAT 44684438 >seq2 Length=43913520 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 170989 CTGAAGATCAATATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTGAACTATTCGT 171048 |||| ||| || ||||| ||||||||||| || ||||| |||| | ||||| | Sbjct 22638261 CTGATGATACTTACATTCTAGATGCTGCTGAGGAGGCAGGGATTGAGCTTCCATATTCCT 22638320 Query 171049 GTCGTGCTGGTGCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCTGTTGATCAAT 171108 | | || ||||| ||||| |||||||| || ||| | | | || ||||||| || | Sbjct 22638321 GCAGAGCAGGTGCATGTTCCACCTGTGCCGGTAAAGTGGTGTCGGGAGCTGTTGACCAGT 22638380 Query 171109 CCGATCAATCTTTCCTTGATGATGATCAGATTGAATCAGGTTTCATTCTGACCTGCGTCT 171168 | ||| ||| || || || || | || || || ||||| | ||||||| |||| Sbjct 22638381 CAGATGGATCCTTTCTCGACGAGAACCAAATGAAAGAAGGTTATTTGTTGACCTGTGTCT 22638440 Query 171169 CATATCCTACAAGTGATTGTGTAATC 171194 | || || || |||||| ||| ||| Sbjct 22638441 CGTACCCCACTTGTGATTCTGTGATC 22638466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622032873603120