Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq4825 690 0.0 seq6 425 7e-114 seq8 354 1e-92 seq36 178 2e-39 seq4 174 2e-38 seq4826 138 1e-27 seq1731 132 6e-26 seq3 116 4e-21 seq9 89.7 6e-13 seq2 87.8 2e-12 >seq4825 Length=155848 Score = 690 bits (764), Expect = 0.0 Identities = 753/995 (76%), Gaps = 4/995 (0%) Strand=Plus/Minus Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657 |||||||||||| ||||| |||| | || ||||| || | || ||||| ||||| || Sbjct 1277 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1218 Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716 ||||||||||| | | | || || ||||| || || |||| ||| | |||||||| Sbjct 1217 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 1159 Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776 ||| || || || || || || |||||||| || |||| || || | ||||||||||| Sbjct 1158 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACAA 1099 Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836 || ||||| ||||| || |||| ||||| ||||| ||| | ||||| ||||| || Sbjct 1098 TATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAAT 1039 Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTAT 177896 ||||||||| |||||| | ||||| ||| | ||||| |||||||||| || | | | Sbjct 1038 CTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGTCCTTATGAATTAATCGT 979 Query 177897 CTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTTTCTTACCG 177956 | ||||| | | ||| | | |||||||||||||||||||| ||| || ||| Sbjct 978 TCTACACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCG 919 Query 177957 CCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGC 178016 ||||||||||| || ||||| ||| ||||| || ||||| || || || || |||| Sbjct 918 TCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 859 Query 178017 TGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTAT 178076 ||| ||| | | || || |||||||||| || ||||| | |||||| || || || Sbjct 858 TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAAT 799 Query 178077 CAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 178136 | ||| || ||||||| |||| |||| ||||| || |||||||||||||| |||||||| Sbjct 798 CTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 739 Query 178137 CTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGG 178196 || |||||||| ||||| |||||||| || || ||||| || || ||||| ||||| || Sbjct 738 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGG 679 Query 178197 TTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTATG 178255 |||| |||| || || | | | | || | |||||||| || || ||| | || | | Sbjct 678 TTCTTTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 620 Query 178256 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCG 178315 |||||| |||||| ||||||||||| || || || ||||| || ||||||||||| || | Sbjct 619 GTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 560 Query 178316 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 178375 | || | ||||||||||| || ||||||||||| ||||| | ||||||||||| | Sbjct 559 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAG 500 Query 178376 CAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCA 178435 | || |||||||| || ||||||||||| |||||| | ||| | ||||| ||||| |||| Sbjct 499 CTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAGGTATCAGCACTATGGCTTTCA 440 Query 178436 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACA 178495 |||| || |||||||| |||||||| || | | |||||||| ||| || | || | Sbjct 439 ACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATA 380 Query 178496 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATG 178555 | ||||| || | | ||||| ||| |||||||||||||| |||||||| ||||||| Sbjct 379 CTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCACGAACGTAATG 320 Query 178556 CTCACAACTTCCCTCTTGACCTCGCTGCTGCTGAA 178590 |||| ||||||||||| ||| | ||||||| |||| Sbjct 319 CTCATAACTTCCCTCTAGACTTAGCTGCTGTTGAA 285 Score = 560 bits (620), Expect = 1e-154 Identities = 734/1014 (72%), Gaps = 2/1014 (0%) Strand=Plus/Plus Query 178839 TTTGATGTACTCGATGACTGGCTTAAGCGTGATCGGTTCGTTTTTGTTGGTTGGTCAGGT 178898 |||||| | | ||||||||| | | | || || ||||||||||| || ||||| ||| Sbjct 33139 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGT 33198 Query 178899 CTTCTTCTGTTCCCTACTGCTTACATGGCACTGGGCGGTTGGCTCACGGGCACAACATTC 178958 || | || || ||| ||| || | || | || || ||| |||| || ||||| || Sbjct 33199 CTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGAGGCTGGTTCACAGGTACAACCTTT 33258 Query 178959 GTCACCTCGTGGTATACTCACGGGATTGCTTCTTCGTATCTTGAGGGATGTAATTTCCTT 179018 || || || |||||||| || || | || ||| ||| | || || || |||||| | Sbjct 33259 GTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAATTTCTTA 33318 Query 179019 ACTGCTGCTGTATCAACTCCTGCTGACGCTCTCGGACATTCCCTACTTCTTCTATGGGGT 179078 ||||| || || || ||||||||| | | | | |||||| | | | || |||||| Sbjct 33319 ACTGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTGTGGGGT 33378 Query 179079 CCAGAAGCTCAGGGAGATTTCGTCCGCTGGCTCCAACTTGGGGGACTATGGCCTTTTGTG 179138 || ||||| || || ||||| || ||| ||| | || || || ||| ||||||| Sbjct 33379 CCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTT 33438 Query 179139 GCGCTCCACGGTGCCTTCGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATCGCACG- 179197 || ||||| ||||| |||| || ||||| |||||| | || || || ||| | || || Sbjct 33439 GCCCTCCATGGTGCTTTCGGACTAATAGGCTTCATGTTACGTCAATTCGAACTTGCTCGA 33498 Query 179198 TCTAGTCGGTATTCGTCCTTACAATGCAATCGCGTTTTCTGGTCCAATTGCTGTCTTTGT 179257 ||| || | | || ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 33499 TCTGTTCAAT-TGCGACCTTATAATGCAATCGCGTTTTCTGGTCCAATTGCTGTTTTTGT 33557 Query 179258 GTCTGTTTTTCTCATGTATCCTCTCGGACAGTCCTCGTGGTTCTTTGCGCCGTCGTTTGG 179317 ||||| || || || ||||| || ||||| || |||||||||||||| ||||| Sbjct 33558 TTCTGTATTCCTGATTTATCCACTAGGACAATCTGGTTGGTTCTTTGCGCCAAGTTTTGG 33617 Query 179318 AGTTGCAGCGATTTTCCGCTTCCTACTCTTCCTACAGGGCTTCCACAACTGGACGCTCAA 179377 || ||||| || || || ||| | ||||| | || || || || || ||||| | || Sbjct 33618 TGTAGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACATTAAA 33677 Query 179378 CCCGTTCCACATGATGGGTGTAGCAGGTATCCTGGGCGGAGCATTGCTTTGTGCCATTCA 179437 ||| || || |||||||| || ||||| | |||||| || ||||| || || ||||| Sbjct 33678 CCCATTTCATATGATGGGAGTTGCAGGGGTATTGGGCGCTGCTTTGCTATGCGCTATTCA 33737 Query 179438 TGGTGCTACAGTAGAGAACACACTCTTTGAAGACAGTGACCAATCAAATACATTCAAGGC 179497 ||||||||| ||||| || || | |||||||| |||| ||||||||||| || Sbjct 33738 TGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 33797 Query 179498 ATTCGAGCCTACACAAGAAGAGGAGACCTATTCGATGGTTACTGCCAACCGTTTCTGGTC 179557 || | || || |||| || || || ||||| ||||| || || ||||| || ||||| Sbjct 33798 TTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCGAACCGCTTTTGGTC 33857 Query 179558 TCAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGTTTGT 179617 || |||||||| | || || |||||| |||||| |||||||||||||||| ||||| Sbjct 33858 CCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 33917 Query 179618 TCCTGTCATGGGTCTTTGGACCTCTAGCATTGGTATTATTGGTCTTGCACTTAACCTTAG 179677 || || | ||| | |||| | |||| | ||||||| || || ||||| | Sbjct 33918 ACCAGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTGCG 33977 Query 179678 AGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCTGAGTTCGAGACGTT 179737 || |||||||| ||||| || || || | |||||||| |||||||| || ||||| || Sbjct 33978 CGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAGAAGATCCTGAATTTGAGACTTT 34037 Query 179738 CTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATGGCACCAGTCGATCA 179797 ||| || || || || || || || |||||| | |||||||||||||| | ||||| Sbjct 34038 CTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 34097 Query 179798 ACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 179851 || ||||||||| || |||| ||||| || || | || | || |||||||| Sbjct 34098 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 34151 >seq6 Length=36610139 Score = 425 bits (470), Expect = 7e-114 Identities = 459/604 (76%), Gaps = 3/604 (0%) Strand=Plus/Plus Query 177937 GAGTGGGAACTTTCTTACCGCCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCT 177996 ||| |||| ||| || ||| ||||||||||| || ||||| ||| ||||| || ||| Sbjct 34152490 GAGAGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCT 34152549 Query 177997 CCAGTCGCCGCAGCATCTGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCT 178056 || || || || || ||||||| ||| | | || || |||||||||| || ||| Sbjct 34152550 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGCTTTTCT 34152609 Query 178057 GACGCTATGCCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAG 178116 || | |||||| || || ||| ||| || ||||||| |||| |||| ||||| || ||| Sbjct 34152610 GATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAG 34152669 Query 178117 CACAACATCCTGATGCACCCCTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCT 178176 ||||||||||| |||||||| || |||||||| ||||| |||||||| || || ||||| Sbjct 34152670 CACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCC 34152729 Query 178177 CTGTTCAGTGCGATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGA 178235 || || ||||| ||||| |||||| |||| || | || | | | || | |||||||| || Sbjct 34152730 CTATTTAGTGCTATGCATGGTTCTTTGGTAACCT-CTAGTTTGATCAGGGAAACCACAGA 34152788 Query 178236 GAACGAAAGTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGT 178295 || ||| | || | ||||||| |||||| ||||||||||| || || || ||||| Sbjct 34152789 AAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAACTTATAATATCGT 34152848 Query 178296 TGCTGCTCATGGTTACTTCGGT-CGCCTGATCTTCCAATACGCATCCTTCAACAACTCCC 178354 || ||||||||||| || ||| || | ||||||||||| || ||||||||||| | Sbjct 34152849 AGCCGCTCATGGTTATTTTGGTCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTC 34152908 Query 178355 GTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTG 178414 |||| | ||||||||||| || || |||||||| || ||||||||||| |||||| | | Sbjct 34152909 GTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCTTTAG 34152968 Query 178415 GTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATA 178474 || | ||||| ||||| |||||||| || |||||||| |||||||| || | | |||| Sbjct 34152969 GTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATA 34153028 Query 178475 GTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGG 178534 |||| ||| || | || || ||||| || | | ||||| ||| |||||||||| Sbjct 34153029 GTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATTAACCGCGCTAACCTTGGTATGG 34153088 Query 178535 AAGT 178538 | || Sbjct 34153089 AGGT 34153092 Score = 87.8 bits (96), Expect = 2e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 178525 CTTGGTATGGAAGTCATGCACGAGCGTAATGCTCACAACTTCCCTCTTGACCTCGCTGCT 178584 |||||||||||||| |||||||| ||||||||||| ||||||||||| ||| | |||||| Sbjct 7295908 CTTGGTATGGAAGTTATGCACGAACGTAATGCTCATAACTTCCCTCTAGACTTAGCTGCT 7295967 Query 178585 GCTGAA 178590 | |||| Sbjct 7295968 GTTGAA 7295973 >seq8 Length=31745509 Score = 354 bits (392), Expect = 1e-92 Identities = 359/465 (77%), Gaps = 2/465 (0%) Strand=Plus/Plus Query 177925 TACATGGGTCGTGAGTGGGAACTTTCTTACCGCCTAGGTATGCGTCCCTGGATCTGTGTA 177984 |||||||||||||||||||| ||| || ||| ||||||||||| || ||||| ||| Sbjct 5168713 TACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTCTAGGTATGCGACCTTGGATTGCTGTT 5168772 Query 177985 GCATACTCTGCTCCAGTCGCCGCAGCATCTGCTGTATTCCTTGTTTATCCTTTCGGTCAA 178044 ||||| || ||||| || || || || ||||||| ||| | | || || |||||||| Sbjct 5168773 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAA 5168832 Query 178045 GGTTCTTTCTCTGACGCTATGCCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTC 178104 || || ||||| | |||||| || || ||| ||| || ||||||| |||| |||| Sbjct 5168833 GGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTA 5168892 Query 178105 TTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGTTGGGCGTCGCTGGTGTC 178164 ||||| || |||||||||||||| |||||||| || |||||||| ||||| |||||||| Sbjct 5168893 TTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTA 5168952 Query 178165 TTTGGTGGTTCTCTGTTCAGTGCGATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTC-G 178223 || || ||||| || || ||||| ||||| |||||| |||| || | || | | | || | Sbjct 5168953 TTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCT-CTAGTTTGATCAG 5169011 Query 178224 TGAAACCACCGAGAACGAAAGTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGAC 178283 |||||||| || || ||| | || | ||||||| |||||| ||||||||||| || Sbjct 5169012 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGGTTCGGGCAAGAAGAAGAAAC 5169071 Query 178284 CTACAACATCGTTGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTT 178343 || || ||||| || ||||||||||| || || || | ||||||||||| || || Sbjct 5169072 TTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTT 5169131 Query 178344 CAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGT 178388 ||||||||| ||||| | ||||||||||| || || |||||||| Sbjct 5169132 CAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGT 5169176 Score = 140 bits (154), Expect = 4e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657 |||||||||||| ||||| |||| | || ||||| || | || ||||| ||||| || Sbjct 2878685 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 2878744 Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716 ||||||||||| | | | || || ||||| || || |||| ||| | |||||||| Sbjct 2878745 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 2878803 Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776 ||| || || || || || || |||||||| || |||| || || | ||||||||||| Sbjct 2878804 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGCAACAA 2878863 Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTT 177827 || ||||| ||||| || |||| ||||| ||||| ||| | ||||| Sbjct 2878864 TATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCACTT 2878914 >seq36 Length=917149 Score = 178 bits (196), Expect = 2e-39 Identities = 213/287 (74%), Gaps = 2/287 (1%) Strand=Plus/Minus Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657 |||||||||| | ||||| |||| | || ||||| || | || ||||| ||||| || Sbjct 329997 TTCTGTAACTAGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 329938 Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716 ||||||||||| | | | || || ||||| || || |||| ||| | || ||| Sbjct 329937 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCCATTCC 329879 Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776 ||| || || || || || || |||||||| || | || || || | ||||||||||| Sbjct 329878 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCAGGATCTCTACTTTATGGCAACAA 329819 Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836 || ||||| ||||| || |||| ||||| ||||| ||| | ||||| ||||| || Sbjct 329818 TATTATTTCCGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCACTTTTATCCAAT 329759 Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTT 177883 ||||||||| |||||| | ||||| ||| | ||||| |||||||||| Sbjct 329758 CTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAACGGTGGTCCTT 329712 >seq4 Length=35924511 Score = 174 bits (192), Expect = 2e-38 Identities = 188/249 (76%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 178342 TTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGG 178401 ||||||||||| ||||| | ||||||||||| || || |||||||| | |||||||| Sbjct 4757228 TTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAATAAGTATCTGG 4757287 Query 178402 TTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAG 178461 || |||||| | ||| | ||||| ||| | |||||||| || | |||||| |||||||| Sbjct 4757288 TTTACTGCTTTAGGTATCAGCACTATGACTTTCAACCTAAATGATTTCAATTTCAACCAA 4757347 Query 178462 TCCATCATGGATAGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTCAACCGTGCT 178521 || | | |||||||| | | || | || || || || || | | ||||| ||| Sbjct 4757348 TCTGTAGTTGATAGTCAAGCCTGTGTAATTAATACTTGAGCTGATATCATTAACCGCGCT 4757407 Query 178522 GGTCTTGGTATGGAAGTCATGCACGAGCGTAATGCTCACAACTTCCCTCTTGACCTCGCT 178581 |||||||| ||||| |||| ||| | ||||||||| |||||| |||| ||| | ||| Sbjct 4757408 AATCTTGGTAAAGAAGTTATGCTCGAACATAATGCTCATAACTTCTCTCTAGACTTAGCT 4757467 Query 178582 GCTGCTGAA 178590 |||| |||| Sbjct 4757468 GCTGTTGAA 4757476 Score = 96.9 bits (106), Expect = 4e-15 Identities = 141/195 (72%), Gaps = 7/195 (4%) Strand=Plus/Minus Query 179127 TGGCCTTTTGTGGCGCTCCACGGTGCCTTCGCTCTCATAGGTTTCATGCTTCGGCAGTTT 179186 ||| ||||||| || || || ||||| |||| || |||| || |||| | | || || Sbjct 12713480 TGGACTTTTGTTGCCCTTCATGGTGCTTTCGGACTAATAGCTT-CATGTTATGTCAATTC 12713422 Query 179187 GAAATCGCACGTCTAGTCGGT---ATT-CGTCCTTACAATGCAATCGCGTTTTCTGGTCC 179242 ||| | | | ||||| ||| || ||||| ||||||||||||||||||||||| Sbjct 12713421 GAACTTAATTGCTTGATCGGTTCAATTGCGACCTTATAATGCAATCGCGTTTTCTGGTCC 12713362 Query 179243 AATTGCTGTCTTTGTGTCTGTTTTTCTCATGTATCCTCTCGGACAGTCCTCGTGGTTCTT 179302 |||| ||| ||||| | ||| || || || ||||| || |||| || || ||||| Sbjct 12713361 GATTGTTGTTTTTGTTTATGTATTCCTGATTTATCCACTATGACAATCTGGTTGATTCTT 12713302 Query 179303 TGCGCCGTCGTTTGG 179317 ||||| || ||||| Sbjct 12713301 TGCGCAGT--TTTGG 12713289 >seq4826 Length=244980 Score = 138 bits (152), Expect = 1e-27 Identities = 148/196 (76%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 179656 TTGGTCTTGCACTTAACCTTAGAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAG 179715 ||||||| || || ||||| | || |||||||| ||||| || || || | ||||||| Sbjct 499 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 440 Query 179716 AGGATCCTGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTG 179775 | |||||||| || ||||| ||||| || || || || || || || |||||| | |||| Sbjct 439 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 380 Query 179776 CTTGGATGGCACCAGTCGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGC 179835 |||||||||| | ||||| || ||||||||| || |||| ||||| || || | | Sbjct 379 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTAC 320 Query 179836 CAAGAGGCAACGCTCT 179851 | | || |||||||| Sbjct 319 CCCGTGGAAACGCTCT 304 >seq1731 Length=31681 Score = 132 bits (146), Expect = 6e-26 Identities = 147/196 (75%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 179656 TTGGTCTTGCACTTAACCTTAGAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAG 179715 ||||||| || || ||||| | || |||||||| ||||| || || || | ||||||| Sbjct 4297 TTGGTCTGGCCCTGAACCTCCGCGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCAG 4238 Query 179716 AGGATCCTGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTG 179775 | |||||||| || ||||| ||||| || || || || || || || |||||| | |||| Sbjct 4237 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 4178 Query 179776 CTTGGATGGCACCAGTCGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGC 179835 |||||||||| | ||||| || ||||||| | || |||| ||||| || || | | Sbjct 4177 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAACCCTTATATTCCCTGAGGAGGTTCTAC 4118 Query 179836 CAAGAGGCAACGCTCT 179851 | | || |||||||| Sbjct 4117 CCCGTGGAAACGCTCT 4102 >seq3 Length=50312079 Score = 116 bits (128), Expect = 4e-21 Identities = 144/196 (73%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 179656 TTGGTCTTGCACTTAACCTTAGAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAG 179715 ||||||| || || ||||| | || |||||||| ||| | ||||| || | ||||||| Sbjct 24072548 TTGGTCTAGCCCTGAACCTCCGCGCCTATGACTTCGTTCCTCAAGAAATTCGCGCGGCAG 24072489 Query 179716 AGGATCCTGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTG 179775 | |||||||| || |||| || | || || || || || || || |||||| | |||| Sbjct 24072488 AAGATCCTGAATTTGAGATTTTTGACACAAA-AATATTCTCTTAAACGAAGGTATTCGTG 24072430 Query 179776 CTTGGATGGCACCAGTCGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGC 179835 |||||||||| | ||||| || ||||||||| || |||| ||||| | || | | Sbjct 24072429 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGGGGTTCTAC 24072370 Query 179836 CAAGAGGCAACGCTCT 179851 | | || |||||||| Sbjct 24072369 CCCGTGGAAACGCTCT 24072354 Score = 114 bits (126), Expect = 2e-20 Identities = 145/197 (74%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 179656 TTGGTCTTGCACTTAACCTTAGAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAG 179715 ||||||| || || |||| | || |||||||| ||||| || | || | ||||||| Sbjct 34945760 TTGGTCTAGCCCTGAACCCGCGCGCCTATGACTTCGTTTCTCAGAAAATTCGCGCGGCAG 34945819 Query 179716 AGGATCCTGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTG 179775 | |||||||| || ||||| ||||| || || || || || || || |||||| | |||| Sbjct 34945820 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTCTTAAACGAAGGTATTCGTG 34945879 Query 179776 CTTGGATGGCACCAGTCGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTAT-TG 179834 |||||||||| | ||||| | ||||||| || |||| |||| || ||||| | Sbjct 34945880 CTTGGATGGCGGCTCAAGATCAGACTCATGAAAGACTTATATTCCCTG-AGGAGTATCTA 34945938 Query 179835 CCAAGAGGCAACGCTCT 179851 || | || |||||||| Sbjct 34945939 CCCCGTGGAAACGCTCT 34945955 Score = 93.3 bits (102), Expect = 5e-14 Identities = 168/243 (69%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 176151 TTTGAGTGTGCTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTC 176210 |||||| |||||| ||| || || ||||||||||| ||||| || ||||| |||||| Sbjct 44684224 TTTGAGGCTGCTGATGATTGCTACATCCTGGATGCTGCAGAGGAGGCTGGAGTGGAACTC 44684283 Query 176211 AACTACTCGTGCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACG 176270 || || ||| | || |||||||| || | ||||| || || || | ||| | Sbjct 44684284 CCATATTCTTGCAGGGCAGGTGCCTGCTCTACCTGTGCTGGGAAGATCGTTGAAGGCTCT 44684343 Query 176271 GTAGATCAAAGCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTG 176330 || || || ||| ||| ||||| |||||| |||| || | | |||| | | || Sbjct 44684344 GTTGACCAGGCTGATGGATCCTTCCTAGATGATAACCAAATGGGAGAGGGTTACTTGCTA 44684403 Query 176331 ACTTGTGTTTCATATCCTACGAGC-GATTGTGTGATTGAGACTGAGAAAGAAGAGGAACT 176389 || || || || || || | ||| |||||||| ||| | || | || |||| || || Sbjct 44684404 ACCTGCGTCTCCTACCCGA-AAGCTGATTGTGTCATTCACACCCACAAGGAAGGCGATCT 44684462 Query 176390 TTA 176392 ||| Sbjct 44684463 TTA 44684465 >seq9 Length=33682890 Score = 89.7 bits (98), Expect = 6e-13 Identities = 130/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 176166 GATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCAACTACTCGTGCCGC 176225 ||| |||| ||||| || |||||| || ||| | || || || ||| ||| | Sbjct 3992839 GATGAGTACATTCTCGACTATGCTGAAGAGAAGGGAATCGATCTTCCCTTCTCTTGCAGA 3992898 Query 176226 GCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGGTAGATCAAAGCGAT 176285 || || | || || |||||| |||||||| | | |||||| |||| |||||| || Sbjct 3992899 GCAGGGTCATGCTCTAGTTGTACAGGAAAAGTTGTTTCGGGCTCGGTGGATCAATCAGAC 3992958 Query 176286 CAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGACTTGTGTTTCATAT 176345 || || ||||||||||| ||| | ||||| |||| |||| |||||||| | ||| Sbjct 3992959 CAGAGCTTTCTTGATGATGAACAGGTGGATGCGGGTTATGTTCTCACTTGTGTGGCTTAT 3993018 Query 176346 CCTA 176349 |||| Sbjct 3993019 CCTA 3993022 >seq2 Length=43913520 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 176161 CTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCAACTACTCGT 176220 |||| ||| || ||||| |||||||||||||| ||||| |||| || || || | Sbjct 22638261 CTGATGATACTTACATTCTAGATGCTGCTGAGGAGGCAGGGATTGAGCTTCCATATTCCT 22638320 Query 176221 GCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGGTAGATCAAA 176280 || | || ||||| ||||| | ||||| || ||| | | ||||| | || || || Sbjct 22638321 GCAGAGCAGGTGCATGTTCCACCTGTGCCGGTAAAGTGGTGTCGGGAGCTGTTGACCAGT 22638380 Query 176281 GCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGACTTGTGTTT 176340 ||| ||| || || || || |||| || | | ||||| | |||| ||||| | Sbjct 22638381 CAGATGGATCCTTTCTCGACGAGAACCAAATGAAAGAAGGTTATTTGTTGACCTGTGTCT 22638440 Query 176341 CATATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGAACTTTATTGA 176396 | || || || | |||| |||||| | || | |||||| || ||||||||| Sbjct 22638441 CGTACCCCACTTGTGATTCTGTGATCCATACCCACAAAGAAAGTGATCTTTATTGA 22638496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596271227768160