Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq2 201 3e-46 seq1 196 1e-44 seq7 188 2e-42 seq6 176 1e-38 seq3 156 1e-32 seq4 107 5e-18 >seq2 Length=43913520 Score = 201 bits (222), Expect = 3e-46 Identities = 168/206 (82%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||||||||| || ||||| || |||||| | ||||||||||| || ||| Sbjct 39747125 CAGATCTTTGTGAAAACTCTGACCGGAAAGACCATCACCTTGGAGGTGGAAAGTTCTGAC 39747184 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||||||| ||||| |||||||| ||||| || ||||| || |||||| Sbjct 39747185 ACAATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAGCAA 39747244 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| ||||| || || |||||||||||||| |||||||| || || || ||| || Sbjct 39747245 CGTCTTATTTTCGCTGGTAAGCAGCTCGAAGATGGCAGGACTCTGGCTGACTACAACATC 39747304 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| |||||||| Sbjct 39747305 CAGAAGGAGTCCACACTCCATCTTGT 39747330 Score = 170 bits (188), Expect = 5e-37 Identities = 167/215 (78%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || ||||||||||| || || || || || ||||| |||||||| || Sbjct 31249574 AAAATGC---AGATCTTCGTGAAAACCCTAACCGGCAAGACCATCACTCTCGAGGTCGAG 31249630 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || ||||||||||| || ||||| ||||| |||||||||||||| ||||||||| Sbjct 31249631 TCTTCGGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCTCCG 31249690 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 |||||||| || || |||||||||||||| ||||| || || || || || || ||||| Sbjct 31249691 GACCAGCAGCGCCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCAGAACCCTAGCCGAC 31249750 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || ||| |||| || || || || || || || || Sbjct 31249751 TACAACATCCAGAAGGAGTCCACTCTCCACCTCGT 31249785 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || ||||| |||||||| || || || || ||||||||| Sbjct 39747353 CAGATCTTCGTTAAGACGTTGACCGGAAAGACGATCACTCTGGAAGTCGAGAGCTCAGAC 39747412 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||||||||||| || || || || || ||||||||||| Sbjct 39747413 ACAATTGACAATGTCAAGGCCAAGATTCAGGATAAGGAGGGCATTCCCCCGGACCAGCAG 39747472 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || ||||| |||||||| || ||||||||||| || ||||| || | Sbjct 39747473 AGATTGATCTTTGCTGGAAAGCAGCTCGAGGACGGAAGGACTCTGGCTGATTACAATATT 39747532 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || ||||| Sbjct 39747533 CAGAAGGAATCCACCCTTCACCTTGT 39747558 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || | |||||||| || || ||||| ||||| || ||||| || Sbjct 39747581 CAGATTTTCGTCAAGACCTTGACAGGAAAGACTATTACCCTTGAGGTTGAGAGCTCGGAT 39747640 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| ||||| ||||| || ||||| ||||| || |||||||| Sbjct 39747641 ACTATTGACAATGTGAAAGCTAAGATCCAGGATAAGGAAGGGATCCCACCAGACCAGCAG 39747700 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| || || || ||||| || || ||||| || || || ||||| ||| | Sbjct 39747701 AGGCTCATCTTTGCTGGTAAGCAGCTTGAGGACGGAAGAACCCTAGCTGATTACAACATT 39747760 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || |||||||||||||| ||||| || Sbjct 39747761 CAGAAAGAATCAACACTCCATCTGGT 39747786 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || | ||||| || || || ||||| ||||| || ||||| || Sbjct 39747809 CAGATTTTTGTCAAGACCTTGACAGGCAAGACTATTACCCTGGAGGTTGAGAGCTCGGAT 39747868 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| ||||| |||||||| |||||||| || || |||||||| Sbjct 39747869 ACGATTGACAATGTGAAAGCTAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAGCAG 39747928 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | |||||||| || || || || || ||||| ||||||||||| || || ||| | Sbjct 39747929 AGGTTGATCTTCGCTGGTAAGCAACTGGAGGATGGCAGGACTCTTGCAGACTACAACATT 39747988 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || ||||| |||||||| ||||| ||| | ||||| Sbjct 39747989 CAGAAAGAGTCAACACTCCATCTGGTTCTCCGACTC 39748024 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| ||||| || || || || || ||||| |||||||| || ||||| Sbjct 39748493 CAGATTTTCGTGAAGACTCTGACCGGCAAGACTATAACCCTAGAGGTGGAGAGTTCAGAT 39748552 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || ||||| |||||||| |||||||| ||||| || ||||| Sbjct 39748553 ACCATTGACAATGTTAAGGCGAAGATCCAGGACAAGGAAGGAATTCCTCCAGATCAGCAG 39748612 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| || ||||| || || || ||||| |||||||| || |||||||| || Sbjct 39748613 AGGTTGATCTTTGCTGGAAAGCAACTTGAGGATGGTAGGACTCTGGCTGATTATAATATC 39748672 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || || | || ||| | ||| Sbjct 39748673 CAGAAGGAGTCCACCCTTCACTTGGTCTTGCGTCTC 39748708 Score = 107 bits (118), Expect = 5e-18 Identities = 77/89 (87%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 ||||||||| ||||||||||| ||| | |||||||||||||| ||||| |||||||| | Sbjct 30554330 AGGAATCCCACCGGACCAGCAGCGATTGATCTTCGCCGGAAAGCAGCTTGAAGATGGCCG 30554389 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAG 178110 |||||| |||||||| ||| |||| |||| Sbjct 30554390 GACTCTCGCCGATTACAACATCCAGAAAG 30554418 >seq1 Length=51465339 Score = 196 bits (216), Expect = 1e-44 Identities = 167/206 (81%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| ||||| || ||||| |||||||| ||||||||| ||| ||| Sbjct 30446450 CAGATCTTCGTAAAAACCCTCACCGGCAAAACCATCACCCTGGAGGTGGAATCCTCCGAC 30446391 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || |||||| || || || ||||||||||| |||||||| ||||||||| Sbjct 30446390 ACCATCGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATCCCTCCCGACCAGCAA 30446331 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||||||||||||||| || || || || || ||||| || ||| || Sbjct 30446330 CGCCTCATCTTCGCCGGAAAACAGCTCGAGGACGGCAGAACCCTAGCCGACTACAACATC 30446271 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || || || Sbjct 30446270 CAGAAGGAATCCACTCTCCACCTCGT 30446245 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || | || ||||| || || || || ||||| || ||||| ||| Sbjct 45561020 CAGATCTTTGTCAAGACCTTGACCGGAAAGACTATTACTCTTGAGGTTGAGAGCTCTGAC 45561079 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| |||||||||||||| ||||| |||||||| |||||||| Sbjct 45561080 ACCATTGACAATGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCTCCAGACCAGCAG 45561139 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || || || || ||| | |||||||| ||||| || || ||||| || || Sbjct 45561140 AGGTTGATTTTTGCTGGCAAGCAGTTGGAAGATGGCAGGACCCTAGCTGATTACAATATC 45561199 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || |||||||| || |||||||| Sbjct 45561200 CAGAAGGAATCAACCCTTCATCTTGT 45561225 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || | || ||||| || || || || ||||| || ||||| ||| Sbjct 45561248 CAGATCTTTGTCAAGACCTTGACCGGAAAGACTATTACTCTTGAGGTTGAGAGCTCTGAC 45561307 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| |||||||||||||| ||||||||||| || || ||||| Sbjct 45561308 ACCATTGACAATGTCAAGGCTAAGATTCAGGACAAGGAAGGAATCCCACCAGATCAGCAG 45561367 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || ||||| || | ||||| || ||||||||||| ||||| ||| | Sbjct 45561368 CGTTTGATCTTTGCTGGAAAGCAATTGGAAGACGGCAGGACTCTTGCTGATTACAACATT 45561427 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| || ||||| Sbjct 45561428 CAGAAGGAGTCTACACTTCACCTTGT 45561453 Score = 145 bits (160), Expect = 2e-29 Identities = 156/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | |||||||| || |||||||| ||||| || ||||| || Sbjct 45560792 CAGATCTTCGTCAAGACCTTGACAGGAAAGACAATCACCCTTGAGGTCGAGAGCTCTGAT 45560851 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| ||||| || || || |||||||| Sbjct 45560852 ACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGTATTCCCCCAGACCAGCAG 45560911 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| || || || ||||| || ||||||||||| ||||| || |||||| || Sbjct 45560912 AGGTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGAAGGACCCTTGCTGACTATAACATC 45560971 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 45560972 CAGAAGGAGTCCACTCTCCA-CTTG 45560995 Score = 136 bits (150), Expect = 1e-26 Identities = 154/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||||| || ||||| || |||||| | || ||||| ||||| ||| Sbjct 45561476 CAGATCTTTGTTAAGACTCTGACTGGAAAGACTATCACCTTGGAAGTGGAGAGCTCCGAC 45561535 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || ||||||||||| || ||||| || ||||| || ||||| Sbjct 45561536 ACCATTGATAATGTGAAGGCCAAGATTCAGGATAAGGAAGGTATTCCTCCAGATCAGCAG 45561595 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| || || || ||||| || ||||||||||| ||||| ||||| || || Sbjct 45561596 AGGTTGATCTTTGCTGGTAAGCAGCTTGAGGATGGAAGGACCCTTGCAGATTACAATATC 45561655 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 45561656 CAGAAGGAGTCTACCCTTCA-CTTG 45561679 >seq7 Length=36358036 Score = 188 bits (208), Expect = 2e-42 Identities = 166/207 (80%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| ||||| || ||||| |||||||| ||||||||| ||| ||| Sbjct 14364552 CAGATCTTCGTGAAAACCCTCACCGGCAAAACTATCACCCTGGAGGTGGAATCCTCCGAC 14364611 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || |||||| |||||||| ||||||||||| ||||| ||||||||||| Sbjct 14364612 ACAATCGACAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCGCCGGACCAGCAG 14364671 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || || || || ||||| || ||| || Sbjct 14364672 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCAGAACCCTAGCCGACTACAACATC 14364731 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || || || ||| Sbjct 14364732 CAGAAGGAGTCCACTCTCCACCTCGTT 14364758 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||||||||||||||| || || || || || || || ||||| ||||||| ||| Sbjct 16384299 CAAATTTTCGTGAAAACTCTTACGGGCAAGACTATTACTCTGGAGGTCAAAAGCTCCGAC 16384240 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| |||||| || |||| || || ||||||| || |||||| Sbjct 16384239 ACTGCAGACAATGTCAAGACTAAGATTGAGTACAAGGAGGGGATCCCTCGAGATCAGCAA 16384180 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| || || ||||| || |||||| | || | | |||||||| || Sbjct 16384179 AGGTTGATCTTTGCTGGGAAACAACTAGAAGATAATTGCACGTTGGATGATTATAATATC 16384120 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || |||||||| || ||| | || | | |||||| Sbjct 16384119 AGGAAGGAATCAACCCTTCATTTGGTCCTCCGTCTCAGA 16384081 >seq6 Length=36610139 Score = 176 bits (194), Expect = 1e-38 Identities = 163/207 (79%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||||||||| || ||||| || || ||||| ||||| |||||||| ||| Sbjct 34406535 CAGATCTTTGTGAAAACTCTTACCGGAAAGACCATAACCCTTGAGGTTGAAAGCTCTGAC 34406594 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| |||||||| ||||| ||||| |||||||| || ||||| Sbjct 34406595 ACAATCGACAATGTCAAGGCTAAGATTCAAGACAAGGAAGGCATCCCTCCCGATCAGCAG 34406654 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | |||||||| || || ||||||||||| |||||||||||| | || || ||||| | Sbjct 34406655 AGGCTTATCTTTGCGGGCAAACAGCTCGAGGATGGAAGGACTTTAGCTGACTATAATATT 34406714 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| || || ||| | ||| Sbjct 34406715 CAGAAGGAATCCACCCTTCATTTGGTT 34406741 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || | || || || |||||||| || || || |||||||| ||| Sbjct 34407675 CAGATCTTTGTCAAGACGTTGACTGGGAAGACGATCACTCTAGAAGTTGAAAGCTCGGAC 34407734 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||||||||||||||| || |||||||| || ||||| Sbjct 34407735 ACGATTGATAATGTGAAGGCGAAGATTCAGGACAAAGAGGGCATCCCTCCAGATCAGCAG 34407794 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| || ||||| ||||| || |||||||||||| | ||||| || ||| || Sbjct 34407795 AGGTTGATCTTTGCTGGAAAGCAGCTAGAGGATGGAAGGACTTTGGCCGACTACAACATC 34407854 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || |||||||| || || || ||||| Sbjct 34407855 CAGAAAGAATCTACCCTTCACCTTGT 34407880 Score = 149 bits (164), Expect = 2e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| ||||| || || || || ||||| || ||||| |||||||||||| Sbjct 34078901 CAGATCTTTGTGAAGACTCTTACCGGGAAGACCATCACTCTTGAGGTAGAAAGCTCAGAC 34078960 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| |||||||| ||||| ||||| |||||||| || ||||| Sbjct 34078961 ACCATTGACAATGTCAAGGCTAAGATTCAAGACAAGGAAGGTATCCCTCCAGATCAGCAG 34079020 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | |||||||| || || |||||||| || ||||| | || | || ||||| || | Sbjct 34079021 AGGCTTATCTTTGCTGGTAAACAGCTTGAGGATGGTCGCACCTTAGCTGATTACAATATT 34079080 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| || || ||| | ||| Sbjct 34079081 CAGAAGGAATCCACCCTTCATTTGGTT 34079107 Score = 149 bits (164), Expect = 2e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||||||||| || || || || ||||| || ||||| |||||||| ||| Sbjct 34641349 CAGATCTTTGTGAAAACTCTTACTGGGAAGACCATCACTCTTGAGGTAGAAAGCTCGGAC 34641408 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| |||||||| ||||||||||| |||||||| || ||||| Sbjct 34641409 ACCATTGACAATGTCAAGGCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGATCAGCAG 34641468 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| || || |||||||| || ||||| | || | || ||||| || | Sbjct 34641469 AGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGTCGTACCTTAGCTGATTACAATATT 34641528 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| || || ||| | ||| Sbjct 34641529 CAGAAGGAATCGACCCTTCATTTGGTT 34641555 Score = 147 bits (162), Expect = 5e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || || || ||||| || || ||| | || || |||||||| ||| Sbjct 34406991 CAGATTTTTGTTAAGACCCTTACTGGAAAGACTATTACCTTAGAAGTTGAAAGCTCTGAC 34407050 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| ||||||||||| || || || ||||| ||||||||||| Sbjct 34407051 ACTATTGATAATGTCAAAGCTAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAGCAG 34407110 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | ||||| || || || || ||||| ||||| || | |||||||| || |||||| || Sbjct 34407111 AGGCTTATTTTTGCTGGGAAGCAGCTTGAAGACGGCCGTACTCTTGCTGACTATAACATC 34407170 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || || ||||| || ||| Sbjct 34407171 CAGAAGGAGTCAACCCTTCAT 34407191 Score = 140 bits (154), Expect = 8e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| ||||| || || || || ||| | || || |||||||| ||| Sbjct 34406763 CAGATCTTTGTTAAAACACTCACTGGCAAGACCATTACCTTAGAAGTTGAAAGCTCTGAC 34406822 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || |||||||||||||| ||||| || ||||| || ||||| Sbjct 34406823 ACCATTGACAATGTTAAGGCTAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAGCAG 34406882 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | ||||||||||| || |||||||| || ||||| | || | || ||||| || | Sbjct 34406883 AGGCTTATCTTCGCGGGCAAACAGCTTGAGGATGGTCGTACATTAGCTGATTACAATATT 34406942 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| || || ||||| ||| Sbjct 34406943 CAGAAGGAATCCACCCTTCATCTGGTT 34406969 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || |||||||| || || |||||||| || || ||||| || || Sbjct 34407219 CAAATCTTTGTCAAGACCCTCACAGGGAAGACAATCACCCTTGAAGTAGAAAGTTCGGAT 34407278 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||| || || ||||| ||||||||||| ||||||||||| Sbjct 34407279 ACAATTGACAATGTGAAGGCAAAAATCCAAGACAAGGAAGGAATCCCCCCGGACCAGCAG 34407338 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || || || || ||| | || ||||||||||| | || ||||| || | Sbjct 34407339 AGGTTGATTTTTGCTGGCAAGCAGTTGGAGGATGGAAGGACATTGGCTGATTACAATATT 34407398 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 || || ||||| ||||| ||| | || |||| || || Sbjct 34407399 CAGAAGGAATCCACACTCCATTTGGTACTGAGGCTGAG 34407436 Score = 132 bits (146), Expect = 1e-25 Identities = 153/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||| || | |||||||| || || || | |||||||| ||||||||| Sbjct 34407447 CAGATTTTTGTGAAGACATTGACAGGAAAGACAATTACTTTGGAGGTGGAGAGCTCAGAC 34407506 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||| |||||||| |||||||| ||||| || |||||||| Sbjct 34407507 ACAATTGATAATGTGAAGGCAAAAATTCAGGATAAAGAAGGCATCCCACCAGACCAGCAG 34407566 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || || || || || || ||||| || ||||| | || ||||| || || || | Sbjct 34407567 AGGCTGATTTTTGCTGGTAAGCAGCTTGAGGATGGTCGTACCCTTGCTGACTACAATATT 34407626 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || |||||||| || || || |||| Sbjct 34407627 CAGAAAGAATCTACCCTCCA-CTTG 34407650 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| || | || || || || |||||| | ||||| || |||||||| Sbjct 34642261 CAAATCTTTGTGAAGACATTGACTGGCAAGACCATCACCTTGGAGGTTGAGAGCTCAGAT 34642320 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || || || ||||||||||| |||||||| || || || || Sbjct 34642321 ACAATTGATAATGTGAAGGCGAAAATCCAGGACAAAGAGGGAATCCCACCAGATCAACAG 34642380 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || ||||| ||| | || |||||||| || || || || || ||| || Sbjct 34642381 CGTTTGATTTTTGCTGGAAAGCAGTTGGAGGATGGAAGAACCCTGGCTGACTACAACATC 34642440 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || ||||| || || || || |||||| Sbjct 34642441 CAGAAAGAGTCCACCCTTCACCTTGTT 34642467 Score = 122 bits (134), Expect = 2e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| || | || || || || |||||| | ||||| || |||||||| Sbjct 34079813 CAAATCTTTGTGAAGACATTGACCGGCAAGACCATCACCTTGGAGGTTGAGAGCTCAGAT 34079872 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || || || ||||||||||| |||||||| || || || || Sbjct 34079873 ACAATTGATAACGTGAAGGCGAAAATCCAGGACAAAGAGGGAATCCCACCAGATCAACAG 34079932 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || ||||| ||| | || |||||||| || || || || || ||| || Sbjct 34079933 CGTTTGATTTTTGCTGGAAAGCAGTTGGAGGATGGAAGAACCCTGGCTGACTACAACATC 34079992 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || || || ||| Sbjct 34079993 CAGAAGGAGTCCACCCTTCACCTCGTT 34080019 >seq3 Length=50312079 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| ||||| || || || || ||||| || ||||| || ||||||||| Sbjct 6143955 CAGATATTTGTGAAGACTCTGACTGGGAAGACTATCACACTTGAGGTTGAGAGCTCAGAC 6144014 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| ||||||||||||||| ||||| ||||| || |||||||| Sbjct 6144015 ACCATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAAGGCATCCCACCAGACCAGCAG 6144074 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | ||||| || || ||||| ||||| || ||||| | || || ||||| || || | Sbjct 6144075 AGGCTTATATTTGCTGGAAAGCAGCTGGAGGATGGCCGCACACTGGCCGACTACAATATT 6144134 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || || ||||| || Sbjct 6144135 CAAAAGGAGTCTACCCTTCATCTGGT 6144160 Score = 154 bits (170), Expect = 4e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||||||||| || || || || |||||||||||||| ||||| || ||| Sbjct 6143043 CAGATATTTGTGAAAACTCTTACTGGCAAGACAATCACCCTCGAGGTTGAAAGTTCGGAC 6143102 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| |||||||| ||||| ||||| |||||||| || ||||| Sbjct 6143103 ACTATTGACAATGTCAAAGCGAAGATTCAAGACAAGGAAGGTATCCCTCCAGATCAGCAG 6143162 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| || || || ||||| || |||||| |||| | || ||||| ||| | Sbjct 6143163 AGGCTCATCTTTGCTGGTAAGCAGCTAGAGGATGGACGGACCTTAGCTGATTACAACATT 6143222 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || || || || || ||| | ||| || Sbjct 6143223 CAGAAGGAGTCGACCCTTCATTTGGTTCTG 6143252 Score = 147 bits (162), Expect = 5e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || ||||| || ||||| || || || ||||| || || Sbjct 6143499 CAGATTTTCGTAAAGACCCTTACCGGAAAGACTATCACTCTAGAAGTTGAAAGTTCTGAT 6143558 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 6143559 ACTATTGATAATGTCAAAGCTAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAGCAG 6143618 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || || || || || || |||||||||||||| | || ||||| || |||||| || Sbjct 6143619 AGGCTCATTTTTGCTGGCAAGCAGCTCGAAGATGGGCGTACCCTTGCTGACTATAACATC 6143678 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || |||||||| || ||| Sbjct 6143679 CAGAAGGAATCAACCCTCCAT 6143699 Score = 131 bits (144), Expect = 4e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || || || || |||||| | |||||||| ||||||||| Sbjct 6144183 CAAATCTTTGTAAAGACATTGACTGGCAAGACAATCACCTTGGAGGTGGAGAGCTCAGAC 6144242 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| || || || || ||||| || || || ||||| Sbjct 6144243 ACCATCGATAACGTGAAGGCTAAGATCCAAGATAAGGAGGGAATTCCACCAGATCAGCAG 6144302 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || || ||||| ||| | |||||||||||||| | || || || ||| | Sbjct 6144303 AGGTTGATTTTTGCTGGAAAGCAGTTGGAAGATGGAAGGACCTTAGCGGACTACAACATT 6144362 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || ||||| |||||| Sbjct 6144363 CAGAAGGAGTCTACCCTGCACCTTGTT 6144389 >seq4 Length=35924511 Score = 107 bits (118), Expect = 5e-18 Identities = 156/220 (71%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 177913 TTAAAATGCTC---CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 || ||||||| |||||||| | || || || | || || | |||||| || ||| Sbjct 33631361 TTTAAATGCTTAAGCAAATTTTTATAAAGACACTTGCTGGGAAGATGATCACACTTAAGG 33631302 Query 177970 TGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCC 178029 | | |||||||| ||||| || || || || ||||||||||||||| || || | Sbjct 33631301 TAAAGAGCTCAGATACCATTGATAATGTGAAGGCAAAGATTCAGGACAAGGAGGGGAGAT 33631242 Query 178030 CTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG 178089 |||| | |||||| | ||||| || || || || ||| | || |||||||| ||| | | Sbjct 33631241 CTCCAAATCAGCAAAGGCTTATTTTTGCTGGGAAGCAGTTGGAGGATGGAAGAACTTTGG 33631182 Query 178090 CCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | || ||||| |||| || || || || || || || || Sbjct 33631181 CAGACTATAATATCCAGAAGGAGTCTACTCTTCACCTCGT 33631142 Score = 84.2 bits (92), Expect = 5e-11 Identities = 90/118 (76%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 178011 CAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTC 178070 ||||| || ||||| || ||||| || ||||| | | || || || ||||| || | Sbjct 27885198 CAGGATAAGGAAGGTATTCCTCCAGATCAGCAGAGGTTGATTTTTGCTGGAAAGCAATTA 27885257 Query 178071 GAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 ||||||||||| |||||||| ||||| ||| | || ||||| ||||| || || |||| Sbjct 27885258 GAAGATGGAAGAACTCTTGCAGATTACAACATTCAGAAAGAGTCAACCCTTCA-CTTG 27885314 Score = 84.2 bits (92), Expect = 5e-11 Identities = 102/138 (74%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 177950 AAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGAT 178009 ||| | ||| || || |||| | |||||||| ||||| || || || || |||||| Sbjct 33626485 AAAGAGGATTACACTTAAGGTTTAGAGCTCAGATACCATTGATAATGTGAAGGCAAAGAT 33626426 Query 178010 TCAGGACAAAGAAGGAA--TCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAG 178067 ||||||||| || || | ||||||| | |||||| | ||||| || || || || ||| Sbjct 33626425 TCAGGACAAGGAGGGGATCTCCCTCCAAATCAGCAAAGGCTTATTTTTGCTGGGAAGCAG 33626366 Query 178068 CTCGAAGATGGAAGGACT 178085 | || |||||||| ||| Sbjct 33626365 TTGGAGGATGGAAGAACT 33626348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203656769538244