Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19]
45,088 sequences; 567,661,845 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq13494 89.7 8e-13
>seq13494
Length=39608
Score = 89.7 bits (98), Expect = 8e-13
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 127101 TTTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGT 127160
||||||||||||||| | || || || || || |||||| ||||||| || || || ||
Sbjct 28333 TTTGCGGTAAAAGATCATACCAGCCCGTGGTCCCCTGAGACTCTTGTGAGTAGTCGTTGT 28392
Query 127161 CACAATGTCACAATACTCAAAGGGGCCAG 127189
||||||||||| ||||||||||||| ||
Sbjct 28393 GACAATGTCACAGTACTCAAAGGGGCTAG 28421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740641539034880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |