Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19] 45,088 sequences; 567,661,845 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq13494 89.7 8e-13 >seq13494 Length=39608 Score = 89.7 bits (98), Expect = 8e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 127101 TTTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGT 127160 ||||||||||||||| | || || || || || |||||| ||||||| || || || || Sbjct 28333 TTTGCGGTAAAAGATCATACCAGCCCGTGGTCCCCTGAGACTCTTGTGAGTAGTCGTTGT 28392 Query 127161 CACAATGTCACAATACTCAAAGGGGCCAG 127189 ||||||||||| ||||||||||||| || Sbjct 28393 GACAATGTCACAGTACTCAAAGGGGCTAG 28421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740641539034880