Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19]
45,088 sequences; 567,661,845 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq15709 181 2e-41
seq16195 141 1e-29
seq12860 141 1e-29
seq12138 141 1e-29
seq10514 141 1e-29
seq43655 138 2e-28
seq15513 138 2e-28
seq15757 132 8e-27
seq16229 131 3e-26
seq32252 129 9e-26
seq15784 125 1e-24
seq44008 122 1e-23
seq13227 122 1e-23
seq16219 114 2e-21
seq10061 100 4e-17
seq16301 86.0 1e-12
seq16264 82.4 1e-11
>seq15709
Length=152337
Score = 181 bits (200), Expect = 2e-41
Identities = 201/268 (75%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| || || | | || || || |||||||| || ||||||||||| || |||
Sbjct 99732 GCAAAGCGACACCGTAAAGTCCTCCGTGACAACATCCAGGGCATCACCAAGCCTGCCATC 99673
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||||| |||||||||||||| ||||||||| || || | | |||||||||| |
Sbjct 99672 CGTCGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATCAGCGGTCTCATTTATGAAGAGACT 99613
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | |||||||| | ||| ||||||| ||||||| || ||| || |||
Sbjct 99612 CGTGGTGTCCTCAAGATCTTTTTGGAGAATGTTATCCGTGATGCTGTCACCTACACTGAG 99553
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
|||||| ||||||||||| || |||||||| | |||||||| | || | ||||||
Sbjct 99552 CACGCTCGCCGTAAGACTGTTACTGCCATGGATGTTGTCTATGCTCTCAAGAGACAAGGC 99493
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAAT 16700
| | | |||||||| || | ||||
Sbjct 99492 AGAACTCTCTATGGTTTCGGCGGCTAAT 99465
>seq16195
Length=257597
Score = 141 bits (156), Expect = 1e-29
Identities = 179/246 (73%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513
|| || || |||||||| || |||||||| || || ||||||||||| |||||||| |||
Sbjct 213959 CTCCGTGACAACATCCAGGGTATCACCAAACCTGCCATCCGTCGTCTTGCTCGTCGAGGT 214018
Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573
|| || |||||| || ||| | ||||||| |||| |||| || |||||||||||
Sbjct 214019 GGTGTGAAGCGTATCAGTGGGCTCATCTATGAGGAGACACGTGGCGTGTTGAAGATCTTT 214078
Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633
| ||| || || | ||||||| | || || ||||| || | | ||||||||
Sbjct 214079 TTGGAGAATGTGATTCGTGATGCTGTAACTTACACTGAGCATGCAAGGAGGAAGACTGTT 214138
Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693
|| |||||||| | |||||||| | || | ||||| | | | |||||||||||
Sbjct 214139 ACTGCCATGGATGTTGTCTATGCTCTCAAGAGGCAAGGAAGGACTCTCTATGGTTTTGGT 214198
Query 16694 AGTTAA 16699
|||||
Sbjct 214199 GGTTAA 214204
>seq12860
Length=31821
Score = 141 bits (156), Expect = 1e-29
Identities = 195/273 (71%), Gaps = 0/273 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| || || | | || || || |||||||| || ||||||||||| || |||
Sbjct 3350 GCAAAGCGACACCGTAAAGTCCTCCGCGACAACATCCAGGGCATCACCAAGCCTGCCATC 3291
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||||| |||||||||||||| ||||||||| || || | | || || || |
Sbjct 3290 CGTCGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATCAGCGGTCTCATTTACGAGGAAACC 3231
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||||||||| | ||| ||||| | ||| ||| | || || |||
Sbjct 3230 CGTGGTGTCCTCAAGATCTTCTTGGAGAATGTTATTCGTGACGCTGTTACTTACACTGAG 3171
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| | | |||||||| || | |||||| | || ||||| | || | |||||
Sbjct 3170 CACGCCAGGAGGAAGACTGTTACTGCTATGGATGTTGTTTATGCTCTTAAGAGGCAAGGT 3111
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
|| | | || ||||| || |||||||||||
Sbjct 3110 CGGACCCTCTACGGTTTCGGTGGTTAATCTTCT 3078
>seq12138
Length=25835
Score = 141 bits (156), Expect = 1e-29
Identities = 179/246 (73%), Gaps = 0/246 (0%)
Strand=Plus/Minus
Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519
|||||||||||||| ||||| || || || || |||||||| |||||||||||||| |||
Sbjct 17862 GATAACATCCAAGGCATCACTAAACCCGCCATTCGTCGTCTTGCTCGTCGTGGTGGTGTC 17803
Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579
|||||| || || | | ||||| || | |||| || | ||||||||| | ||
Sbjct 17802 AAGCGTATCAGCGGTCTCATTTATGAGGAAACCCGTGGCGTCCTCAAGATCTTCTTGGAG 17743
Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639
| ||||| | |||||| | || ||||||||||| | | |||||||| || |
Sbjct 17742 AATGTTATTCGTGATGCCGTTACTTACACCGAGCACGCCAGGAGGAAGACTGTTACTGCT 17683
Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||||| | || ||||| | || | ||||| |||| | || ||||| || |||||
Sbjct 17682 ATGGATGTTGTTTATGCTCTTAAGAGGCAAGGTCGTACCCTCTACGGTTTCGGCGGTTAA 17623
Query 16700 TCTTCT 16705
||||||
Sbjct 17622 TCTTCT 17617
>seq10514
Length=5643
Score = 141 bits (156), Expect = 1e-29
Identities = 195/273 (71%), Gaps = 0/273 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| || || | | || || || |||||||| || ||||||||||| || |||
Sbjct 4665 GCAAAGCGACACCGTAAAGTCCTCCGCGACAACATCCAGGGCATCACCAAGCCTGCCATC 4606
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||||| |||||||||||||| ||||||||| || || | | || || || |
Sbjct 4605 CGTCGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATCAGCGGTCTCATTTACGAGGAAACC 4546
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||||||||| | ||| ||||| | ||| ||| | || || |||
Sbjct 4545 CGTGGTGTCCTCAAGATCTTCTTGGAGAATGTTATTCGTGACGCTGTTACTTACACTGAG 4486
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| | | |||||||| || | |||||| | || ||||| | || | |||||
Sbjct 4485 CACGCCAGGAGGAAGACTGTTACTGCTATGGATGTTGTTTATGCTCTTAAGAGGCAAGGT 4426
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
|| | | || ||||| || |||||||||||
Sbjct 4425 CGGACCCTCTACGGTTTCGGTGGTTAATCTTCT 4393
>seq43655
Length=5931
Score = 138 bits (152), Expect = 2e-28
Identities = 178/246 (72%), Gaps = 0/246 (0%)
Strand=Plus/Minus
Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513
|| || || |||||||| || |||||||| || || ||||||||||| |||||||| |||
Sbjct 3836 CTCCGTGACAACATCCAGGGTATCACCAAACCTGCCATCCGTCGTCTTGCTCGTCGAGGT 3777
Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573
|| || |||||| || ||| | ||||||| |||| |||| || |||||||||||
Sbjct 3776 GGTGTGAAGCGTATCAGTGGGCTCATCTATGAGGAGACACGTGGCGTGTTGAAGATCTTT 3717
Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633
| ||| || || | ||||||| | || || ||||| || | | ||||||||
Sbjct 3716 TTGGAGAATGTGATTCGTGATGCTGTTACTTACACTGAGCATGCAAGGAGAAAGACTGTT 3657
Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693
|| |||||||| | || ||||| | || | ||||| | | | |||||||||||
Sbjct 3656 ACTGCCATGGATGTTGTGTATGCTCTCAAGAGGCAAGGAAGGACTCTCTATGGTTTTGGT 3597
Query 16694 AGTTAA 16699
|||||
Sbjct 3596 GGTTAA 3591
>seq15513
Length=102390
Score = 138 bits (152), Expect = 2e-28
Identities = 177/244 (73%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519
|||||||| |||||||| || ||||| ||||| || ||||| |||||||||||||| ||
Sbjct 79392 GATAACATTCAAGGAATAACAAAGCCTGCTATTCGACGTCTTGCTCGTCGTGGTGGTGTG 79451
Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579
|||||| | || || | || || |||| ||| | || | ||||| ||| | ||
Sbjct 79452 AAGCGTATAAGCGGTTTAATTTACGAGGAGACTCGAGGGGTACTCAAGATATTCTTGGAG 79511
Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639
| ||||| | ||||||| | || || ||||||||| || ||||||||||| |
Sbjct 79512 AATGTTATTCGTGATGCTGTTACTTACACTGAGCACGCTCGTCGCAAGACTGTCACTGCT 79571
Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||||| | || ||||| | || || ||||| | | | ||||||||||| |||||
Sbjct 79572 ATGGATGTTGTTTATGCTCTCAAGCGCCAAGGAAGAACCCTCTATGGTTTTGGTGGTTAA 79631
Query 16700 TCTT 16703
| ||
Sbjct 79632 TTTT 79635
>seq15757
Length=127483
Score = 132 bits (146), Expect = 8e-27
Identities = 177/246 (72%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519
|| ||||||||||| ||||| || || || || |||||||| |||||||||||||| |||
Sbjct 27248 GACAACATCCAAGGCATCACTAAACCCGCCATTCGTCGTCTTGCTCGTCGTGGTGGTGTC 27307
Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579
|||||| || || | | || || || | |||| ||| | ||||||||| | ||
Sbjct 27308 AAGCGTATCAGCGGTCTCATTTACGAGGAAACCCGTGGTGTCCTCAAGATCTTCTTGGAG 27367
Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639
| ||||| | ||| ||| | || || |||||||| | | |||||||| || |
Sbjct 27368 AATGTTATTCGTGACGCTGTTACTTACACTGAGCACGCCAGGAGGAAGACTGTTACTGCT 27427
Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||||| | || ||||| | || | ||||| |||| | || ||||| || |||||
Sbjct 27428 ATGGATGTTGTTTATGCTCTTAAGAGGCAAGGTCGTACCCTCTACGGTTTCGGTGGTTAA 27487
Query 16700 TCTTCT 16705
||||||
Sbjct 27488 TCTTCT 27493
>seq16229
Length=445789
Score = 131 bits (144), Expect = 3e-26
Identities = 177/247 (72%), Gaps = 0/247 (0%)
Strand=Plus/Minus
Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513
|| || || |||||||| || ||||| || || || || |||||||| |||||||||||
Sbjct 215124 CTCCGTGACAACATCCAGGGGATCACAAAACCCGCCATTCGTCGTCTTGCTCGTCGTGGC 215065
Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573
|| || |||||| || || ||| |||| || |||| |||| || |||||||| ||
Sbjct 215064 GGTGTTAAGCGTATCAGCGGGTTGATCTACGAGGAGACACGTGGCGTCTTGAAGATATTT 215005
Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633
|| ||| || || | ||||||| | || |||||||| || | | ||||| ||
Sbjct 215004 CTTGAGAATGTGATTCGTGATGCTGTGACTTACACCGAGCATGCGAGGAGGAAGACGGTG 214945
Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693
|| |||||||| | || ||||| | || | || || |||| |||| ||||||||
Sbjct 214944 ACTGCCATGGATGTTGTGTATGCTCTTAAGAGGCAGGGACGTACTCTTTACGGTTTTGGT 214885
Query 16694 AGTTAAT 16700
||| ||
Sbjct 214884 GGTTGAT 214878
Score = 118 bits (130), Expect = 2e-22
Identities = 187/268 (70%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| || || | | || || || |||||||| || ||||| || || || ||
Sbjct 218361 GCGAAGCGACACCGTAAAGTCCTCCGCGACAACATCCAGGGGATCACAAAACCCGCCATT 218302
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||||| ||||||||||| || || |||||| || || || |||| || ||||
Sbjct 218301 CGTCGTCTCGCTCGTCGTGGCGGTGTGAAGCGTATCAGCGGGCTGATCTACGAGGAGACA 218242
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| || |||||||| || || ||| || || | ||||||| | || ||||||
Sbjct 218241 CGTGGCGTCTTGAAGATATTTCTAGAGAATGTGATTCGTGATGCTGTGACTTACACCGAG 218182
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
|| || | | ||||| || || | |||||| | || ||||| | || | || ||
Sbjct 218181 CATGCGAGGAGGAAGACGGTGACTGCAATGGATGTTGTTTATGCTCTCAAGAGGCAGGGA 218122
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAAT 16700
|||| | |||||||| || ||| ||
Sbjct 218121 CGTACTCTCTATGGTTTCGGTGGTTGAT 218094
>seq32252
Length=1084
Score = 129 bits (142), Expect = 9e-26
Identities = 176/246 (72%), Gaps = 0/246 (0%)
Strand=Plus/Minus
Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519
|| ||||||||||| ||||| || || || || || ||||| |||||||||||||| |||
Sbjct 352 GACAACATCCAAGGCATCACTAAACCCGCCATTCGCCGTCTTGCTCGTCGTGGTGGTGTC 293
Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579
|||||| || || | | || || || | |||| ||| | ||||||||| | ||
Sbjct 292 AAGCGTATCAACGGTCTCATTTACGAGGAAACCCGTGGTGTCCTCAAGATCTTCTTGGAG 233
Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639
| ||||| | ||| ||| | || || |||||||| | | |||||||| || |
Sbjct 232 AATGTTATTCGTGACGCTGTTACTTACACTGAGCACGCCAGGAGGAAGACTGTTACTGCT 173
Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||||| | || ||||| | || | ||||| |||| | || ||||| || |||||
Sbjct 172 ATGGATGTTGTTTATGCTCTTAAGAGGCAAGGTCGTACCCTCTACGGTTTCGGTGGTTAA 113
Query 16700 TCTTCT 16705
||||||
Sbjct 112 TCTTCT 107
>seq15784
Length=168264
Score = 125 bits (138), Expect = 1e-24
Identities = 176/247 (71%), Gaps = 0/247 (0%)
Strand=Plus/Minus
Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513
|| || || |||||||| || ||||| || || || || |||||||| |||||||||||
Sbjct 1558 CTCCGTGACAACATCCAGGGGATCACAAAACCCGCCATTCGTCGTCTTGCTCGTCGTGGC 1499
Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573
|| || |||||| || || ||| |||| || |||| |||| || |||||||| ||
Sbjct 1498 GGTGTTAAGCGTATCAGCGGGTTGATCTACGAGGAGACACGTGGCGTCTTGAAGATATTT 1439
Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633
|| ||| || || | ||||||| | || |||||||| || | | ||||| ||
Sbjct 1438 CTTGAGAATGTGATTCGTGATGCTGTGACTTACACCGAGCATGCGAGGAGGAAGACGGTG 1379
Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693
|| |||||||| | || ||||| | || | || || |||| |||| ||||| ||
Sbjct 1378 ACTGCCATGGATGTTGTGTATGCTCTTAAGAGGCAGGGACGTACTCTTTACGGTTTCGGT 1319
Query 16694 AGTTAAT 16700
||| ||
Sbjct 1318 GGTTGAT 1312
>seq44008
Length=7351
Score = 122 bits (134), Expect = 1e-23
Identities = 175/247 (71%), Gaps = 0/247 (0%)
Strand=Plus/Minus
Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513
|| || || |||||||| || ||||| || || || || |||||||| |||||||||||
Sbjct 1183 CTCCGCGACAACATCCAGGGGATCACAAAACCCGCCATTCGTCGTCTCGCTCGTCGTGGC 1124
Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573
|| || |||||| || || ||| |||| || |||| |||| || |||||||| ||
Sbjct 1123 GGTGTTAAGCGTATCAGCGGGTTGATCTACGAGGAGACACGTGGCGTCTTGAAGATATTT 1064
Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633
|| ||| || || | ||||||| ||||||||||| || | | || || ||
Sbjct 1063 CTAGAGAATGTGATTCGTGATGCTGAGACGTATACCGAGCATGCGAGGAGGAAAACGGTG 1004
Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693
|| |||||||| | || ||||| | || | || || |||| |||| ||||| ||
Sbjct 1003 ACTGCCATGGATGTTGTTTATGCTCTTAAGAGGCAGGGACGTACTCTTTACGGTTTCGGT 944
Query 16694 AGTTAAT 16700
||| ||
Sbjct 943 GGTTGAT 937
>seq13227
Length=36306
Score = 122 bits (134), Expect = 1e-23
Identities = 175/247 (71%), Gaps = 0/247 (0%)
Strand=Plus/Minus
Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513
|| || || |||||||| || ||||| || || || || |||||||| |||||||||||
Sbjct 35751 CTCCGCGACAACATCCAGGGGATCACAAAACCCGCCATTCGTCGTCTCGCTCGTCGTGGC 35692
Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573
|| || |||||| || || ||| |||| || |||| |||| || |||||||| ||
Sbjct 35691 GGTGTTAAGCGTATCAGCGGGTTGATCTACGAGGAGACACGTGGCGTCTTGAAGATATTT 35632
Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633
|| ||| || || | ||||||| ||||||||||| || | | || || ||
Sbjct 35631 CTAGAGAATGTGATTCGTGATGCTGAGACGTATACCGAGCATGCGAGGAGGAAAACGGTG 35572
Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693
|| |||||||| | || ||||| | || | || || |||| |||| ||||| ||
Sbjct 35571 ACTGCCATGGATGTTGTTTATGCTCTTAAGAGGCAGGGACGTACTCTTTACGGTTTCGGT 35512
Query 16694 AGTTAAT 16700
||| ||
Sbjct 35511 GGTTGAT 35505
>seq16219
Length=280169
Score = 114 bits (126), Expect = 2e-21
Identities = 186/268 (69%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| || || | | || || || |||||||| || ||||| || || || ||
Sbjct 32227 GCGAAGCGACACCGTAAAGTCCTCCGCGACAACATCCAGGGGATCACAAAACCTGCCATT 32168
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||||| ||||||||||| || || |||||| || || || |||| || ||||
Sbjct 32167 CGTCGTCTCGCTCGTCGTGGCGGTGTGAAGCGTATCAGCGGGTTAATCTACGAGGAGACA 32108
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| || |||||||| || || ||| || || | ||||||| | || || |||
Sbjct 32107 CGTGGCGTCTTGAAGATATTTCTAGAGAATGTGATTCGTGATGCTGTGACTTACACTGAG 32048
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
|| || | | ||||| || || | |||||| | |||||||| | || | || ||
Sbjct 32047 CATGCGAGGAGGAAGACGGTGACTGCAATGGATGTTGTCTATGCTCTCAAGAGGCAGGGA 31988
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAAT 16700
|||| | || ||||| || ||| ||
Sbjct 31987 CGTACTCTCTACGGTTTCGGTGGTTGAT 31960
>seq10061
Length=15942
Score = 100 bits (110), Expect = 4e-17
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGT 16555
||||| |||||||||||||| ||||||||| || || | | || || || | |||
Sbjct 9686 CGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATCAGCGGTCTCATTTACGAGGAAACCCGT 9745
Query 16556 GATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615
| ||| | ||||||||| | ||| ||||| | ||| ||| | || || ||||||
Sbjct 9746 GGTGTCCTCAAGATCTTCTTGGAGAATGTTATTCGTGACGCTGTTACTTACACTGAGCAC 9805
Query 16616 GCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGT 16675
|| | | |||||||| || | |||||| | || ||||| | || | ||||| |||
Sbjct 9806 GCCAGGAGGAAGACTGTTACTGCTATGGATGTTGTTTATGCTCTTAAGAGGCAAGGTCGT 9865
Query 16676 AAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
| | || ||||| || |||||||||||
Sbjct 9866 ACCCTCTACGGTTTCGGTGGTTAATCTTCT 9895
>seq16301
Length=442187
Score = 86.0 bits (94), Expect = 1e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| || || | | || || ||||||||||| | ||||||||||| || |||
Sbjct 310424 GCAAAGCGACACCGTAAAGTCCTCCGTGATAACATCCAGGCCATCACCAAGCCTGCCATC 310365
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
||||||| ||||||||||||| ||||| ||| || || | ||||||| |||| |
Sbjct 310364 TGTCGTCTTGCTCGTCGTGGTGCTGTCAAACGTATCAGCGGTCTCATCTATGAGGAGAAT 310305
Query 16553 CG 16554
||
Sbjct 310304 CG 310303
>seq16264
Length=344820
Score = 82.4 bits (90), Expect = 1e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513
|| ||||| |||||||| || || || || || || ||||| |||||||| | || |||
Sbjct 6090 CTCCGAGACAACATCCAGGGGATTACAAAACCGGCAATCCGGCGTCTGGCGAGACGAGGT 6149
Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573
|| || || | || || || | ||||| |||| | | ||||||||||| ||
Sbjct 6150 GGCGTAAAAAGGATCAGCGGGCTGATTTATGAGGAGACAAGGGGAGTTTTGAAGATTTTT 6209
Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633
|| ||| || || ||||| || ||| || |||||||| | | ||||| |||
Sbjct 6210 CTGGAGAATGTGATTAGGGATGCGGTCACCTACACGGAGCACGCAAGGAGGAAGACAGTC 6269
Query 16634 ACCTCCATGGATATCGTCTATGC 16656
|| | |||||| |||| || ||
Sbjct 6270 ACGGCTATGGATGTCGTTTACGC 6292
Score = 82.4 bits (90), Expect = 1e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513
|| || || |||||||| || ||||| || || || ||||| |||||||| | || ||
Sbjct 16535 CTCCGCGACAACATCCAGGGGATCACAAAACCGGCAATCCGGCGTCTGGCGAGACGAGGC 16594
Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573
|| || || | || || || | ||||| |||| | | ||||||||||| ||
Sbjct 16595 GGCGTAAAAAGGATCAGCGGGCTGATTTATGAGGAGACGAGGGGAGTTTTGAAGATTTTT 16654
Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633
|| ||| || || ||||| || ||| || |||||||| | || ||||| |||
Sbjct 16655 CTGGAGAATGTGATTAGGGATGCGGTCACCTACACTGAGCACGCAAGGCGAAAGACGGTC 16714
Query 16634 ACCTCCATGGATATCGTCTATGC 16656
|| | |||||| |||| || ||
Sbjct 16715 ACGGCTATGGATGTCGTTTACGC 16737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79033975725984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |