Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19]
45,088 sequences; 567,661,845 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq13853 91.5 1e-13
>seq13853
Length=43806
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || || || |||||||| || ||||| || |||||| | || ||| | |
Sbjct 19106 ATGCAGATCTTCGTGAAAACGCTGACTGGAAAGACGATTACCCTTGAGGTTGAGAGCTCC 19165
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||| | | |||| || || |||||| ||||| || ||| | ||| |||||
Sbjct 19166 GACACCATCG-ACAATGTTAAGACCAAAATTCAGGATAAGGAGGGCATTCCCCCAGATCA 19224
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| || || |||| ||| || || ||| | || |||| || |||| ||||||||
Sbjct 19225 GCAGAGGCTGATTTTTGCCGGGAAGCAACTTGAGGATGGTCGTACTTTGGCTGATTATAA 19284
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498
|||||| || ||||| ||| | || |||| |||
Sbjct 19285 CATTCAGAAGGAGTCGACTTTGCACTTGGTCTTG 19318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425110269218560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |