Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19]
45,088 sequences; 567,661,845 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq16084 131 1e-25
seq15816 116 3e-21
seq13404 116 3e-21
seq14668 113 4e-20
seq4575 113 4e-20
seq13853 109 5e-19
seq14446 105 6e-18
seq22481 102 7e-17
seq15779 102 7e-17
seq15654 102 7e-17
seq14479 96.9 3e-15
seq12168 95.1 1e-14
seq44981 89.7 4e-13
seq44944 87.8 2e-12
seq13580 87.8 2e-12
seq44327 82.4 7e-11
>seq16084
Length=201933
Score = 131 bits (144), Expect = 1e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||||||||| || || | ||||| | || || ||| |||
Sbjct 158 ATGCAAATCTTTGTCAAGACTTTGACGGGAAAGACGATCACCCTAGAGGTAGAGAACTCT 217
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| | ||| || ||| || || || ||||||||||| ||||||
Sbjct 218 GACACGATCGACAACGTAAAGTCTAAGATCCAGGATAAGGAGGGGATTCCACCAGACCAA 277
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| ||| | |||||||| || ||||| | ||||||| || || | | ||| |||||
Sbjct 278 CAACGGCTAATTTTTGCGGGAAAACAGCTCGAAGATGGACGAACACTAGCCGACTACAAC 337
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTG 25208
|||||||| ||||| ||||| || || |||
Sbjct 338 ATTCAAAAGGAATCAACGCTTCACTTGGTG 367
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || || ||||| || || | ||||| | || || ||| |||
Sbjct 386 ATGCAAATCTTTGTGAAAACGTTGACAGGGAAGACGATCACCCTAGAGGTCGAGAACTCT 445
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| | ||| || ||| || || || ||||| || || ||||||
Sbjct 446 GACACGATCGACAACGTCAAGTCTAAGATCCAGGATAAGGAGGGGATCCCGCCAGACCAA 505
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|||||| | ||||| || || ||||| | || |||| ||| || | | ||||||||
Sbjct 506 CAGCGGCTGATTTTCGCAGGAAAACAGCTCGAGGATGGTCGTACGCTTGCTGATTACAAC 565
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| || || || || || || ||
Sbjct 566 ATCCAGAAGGAGTCGACTCTTCA 588
>seq15816
Length=132008
Score = 116 bits (128), Expect = 3e-21
Identities = 150/205 (73%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || ||||||||||||||||| || ||||||| |||| || ||| ||
Sbjct 112795 ATGCAAATCTTCGTAAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGAGTTCC 112736
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || ||| |||||| || || ||||| || ||||| ||||
Sbjct 112735 GACACTATTGA--CAATGTCAAGACCAAAATCCAGGATAAGGAAGGCATCCCACCAGACC 112678
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || || | || ||||| || |||||| | || || | ||||| ||| || || |
Sbjct 112677 AGCAAAGGCTGATCTTTGCGGGTAAACAACTCGAGGACGGGCGCACGTTGGCAGACTATA 112618
Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201
||||||| || ||||| || || ||
Sbjct 112617 ATATTCAGAAGGAATCGACCCTCCA 112593
>seq13404
Length=35904
Score = 116 bits (128), Expect = 3e-21
Identities = 150/205 (73%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || ||||||||||||||||| || ||||||| |||| || ||| ||
Sbjct 5890 ATGCAAATCTTCGTAAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGAGTTCC 5949
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || || || ||| |||||| || || ||||| || ||||| ||||
Sbjct 5950 GACACGATTGA--CAATGTCAAGACCAAAATCCAGGATAAGGAAGGCATCCCACCAGACC 6007
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || || | || ||||| || |||||| | || |||| ||||| ||| || || |
Sbjct 6008 AGCAAAGGCTGATCTTTGCGGGTAAACAACTCGAGGATGGGCGCACGTTGGCAGACTATA 6067
Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201
||||||| || ||||| || || ||
Sbjct 6068 ATATTCAGAAGGAATCGACCCTCCA 6092
>seq14668
Length=62046
Score = 113 bits (124), Expect = 4e-20
Identities = 149/205 (73%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || ||||||||||||||||| || ||||||| |||| || ||| ||
Sbjct 42101 ATGCAAATCTTCGTAAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGAGTTCC 42160
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || || || ||| |||||| || || ||||| || ||||| ||||
Sbjct 42161 GACACAATTGA--CAATGTCAAGACCAAAATCCAGGATAAGGAAGGCATCCCACCAGACC 42218
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || || | || ||||| || |||||| | || || | ||||| ||| || || |
Sbjct 42219 AGCAAAGGCTGATCTTTGCTGGTAAACAACTCGAGGACGGGCGCACGTTGGCAGACTATA 42278
Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201
||||||| || ||||| || || ||
Sbjct 42279 ATATTCAGAAGGAATCGACCCTCCA 42303
>seq4575
Length=13488
Score = 113 bits (124), Expect = 4e-20
Identities = 149/205 (73%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || ||||||||||||||||| || ||||||| |||| || ||| ||
Sbjct 161 ATGCAAATCTTCGTAAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGAGTTCC 220
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || || || ||| |||||| || || ||||| || ||||| ||||
Sbjct 221 GACACGATTGA--CAATGTCAAGACCAAAATCCAGGATAAGGAAGGCATCCCACCAGACC 278
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || || | || ||||| || |||||| | || || | ||||| ||| || || |
Sbjct 279 AGCAAAGGCTGATCTTTGCTGGTAAACAACTCGAGGACGGGCGCACGTTGGCAGACTATA 338
Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201
||||||| || ||||| || || ||
Sbjct 339 ATATTCAGAAGGAATCGACCCTCCA 363
>seq13853
Length=43806
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| ||||| || || ||||||| | || |||||| |
Sbjct 9750 ATGCAAATTTTCGTGAAGACGTTGACAGGAAAGACCATCACCCTGGAGGTGGAGAGCAGT 9809
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| ||||| || ||| ||||| || ||||||||||| ||||||
Sbjct 9810 GACACGATCGACAATGTGAAGACCAAGATCCAGGACAAGGAGGGGATTCCACCGGACCAA 9869
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || | || ||||| || || || | ||||| | || ||| ||| ||| ||||||
Sbjct 9870 CAAAGGTTGATATTTGCAGGGAAGCAGATGGAAGACGGCCGTACTCTGGCCGACTACAAT 9929
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
||||| || || || || || ||
Sbjct 9930 ATTCAGAAGGAGTCGACCCTCCA 9952
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| ||||| || || ||||||| | || |||||| |
Sbjct 19790 ATGCAGATTTTCGTGAAGACGTTGACAGGAAAGACCATCACCCTGGAGGTGGAGAGCAGT 19849
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| ||||| || ||| ||||| || ||||||||||| ||||||
Sbjct 19850 GACACGATCGACAATGTGAAGACCAAGATCCAGGACAAGGAGGGGATTCCACCGGACCAA 19909
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || | || ||||| || || ||| | ||||| | || ||| ||| ||| ||||||
Sbjct 19910 CAAAGGTTGATATTTGCAGGGAAGCAAATGGAAGACGGCCGTACTCTGGCCGACTACAAT 19969
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
||||| || || || || || ||
Sbjct 19970 ATTCAGAAGGAGTCGACCCTCCA 19992
Score = 104 bits (114), Expect = 2e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||||||||| || || | ||||| | || |||||| ||
Sbjct 19334 ATGCAAATCTTCGTGAAGACTTTGACAGGAAAGACGATCACTCTAGAGGTGGAGAGCTCG 19393
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | ||| |||||| ||| ||||| || || || || || |||||
Sbjct 19394 GACACCATTGACAACGTCAAGACAAAAATTCA-GGACAAGGAGGGTATCCCCCCAGACCA 19452
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| | | || ||||| || || || | || || | ||| || ||| ||| |||||
Sbjct 19453 ACAGAGATTGATATTTGCTGGAAAGCAGCTCGAGGACGGTCGTACGTTGGCCGACTACAA 19512
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTG 25208
|||||||| ||||| || || ||| | |||
Sbjct 19513 CATTCAAAAGGAATCGACCCTCCATCTGGTG 19543
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||||||||| ||||| || || ||||||| |||| || |||
Sbjct 9522 ATGCAGATTTTTGTAAAGACCTTGACGGGGAAGACCATCACTCTCGAGGTTGAGAGCAGC 9581
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| | ||| ||| ||| ||||| || || || ||||| |||||
Sbjct 9582 GACACCATCGACAACGTCAAGACAAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAG 9641
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | ||||| || || || || | || |||| ||||| ||| ||| || ||
Sbjct 9642 CAGCGTTTGATTTTCGCAGGAAAGCAGCTCGAGGATGGGCGCACATTGGCCGACTATAAC 9701
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTG 25208
|||||||| || || || || ||| | |||
Sbjct 9702 ATTCAAAAGGAGTCAACTCTCCATCTGGTG 9731
Score = 96.9 bits (106), Expect = 3e-15
Identities = 150/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||||||||| ||||| | || || |||| |||||| ||
Sbjct 9296 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACGATTACTCTCGAGGTGGAGAGCTCG 9355
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | ||| |||||| ||| ||||| || || ||||| || |||||
Sbjct 9356 GACACCATTGACAACGTCAAGACAAAAATTCA-GGACAAGGAGGGTATTCCCCCAGACCA 9414
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| | | || ||||| || || || | || || | ||| || ||| ||| |||||
Sbjct 9415 ACAGAGATTGATATTTGCTGGAAAGCAGCTCGAGGACGGTCGTACATTGGCCGACTACAA 9474
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTG 25208
|||| |||| ||| || || ||| | |||
Sbjct 9475 CATTC--AAAGGATCGACCCTCCATCTGGTG 9503
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||||||||| ||||| | || || |||| || ||| ||
Sbjct 18878 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACGATTACTCTCGAGGTAGAGAGCTCG 18937
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | ||| | || | ||| || || || || ||||| || |||||
Sbjct 18938 GACACAATTGACAACGTTAAGACTAAGATTCAG-GATAAGGAGGGTATTCCTCCGGACCA 18996
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|| || | |||||||| || || ||| | || || | ||||| ||| ||||||||
Sbjct 18997 GCAAAGGTTGATTTTTGCTGGGAAGCAACTCGAGGACGGCCGCACATTGGCAGATTACAA 19056
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTG 25208
||||||||| || || || | || || |||
Sbjct 19057 TATTCAAAAGGAGTCTACTTTGCACTTGGTG 19087
>seq14446
Length=62709
Score = 105 bits (116), Expect = 6e-18
Identities = 153/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || |||||||||||||| || || | ||||| |||| || ||| ||
Sbjct 48270 ATGCAAATCTTCGTAAAGACTTTGACTGGCAAGACTATCACCCTCGAGGTTGAGAGTTCC 48211
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || ||| |||||| || || ||||| || ||||| ||||
Sbjct 48210 GACACTATTGA--CAATGTCAAGACCAAAATCCAGGATAAGGAAGGCATCCCACCAGACC 48153
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| || | || ||||| || ||||| | || || | ||||| | | || ||||
Sbjct 48152 AGCAGAGGCTCATCTTTGCTGGTAAACAGCTCGAGGACGGACGCACCCTTGCTGACTACA 48093
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| || || || ||||| || || ||||| || ||
Sbjct 48092 ACATCCAGAAGGAATCGACTCTCCATTTGGTCCT 48059
Score = 102 bits (112), Expect = 7e-17
Identities = 152/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||||| || || ||| |||| || |||| || |||
Sbjct 48042 ATGCAGATTTTCGTGAAGACTTTAACTGGGAAAACCATTACCCTCGAGGTCGAGAGCAGC 47983
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| ||||| || || ||| || ||| || || ||||| || ||||||||||
Sbjct 47982 GACACCATCGA--CAATGTCAAGACTAAGATCCAAGATAAGGAAGGCATCCCACCTGACC 47925
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| || | || |||||| | ||||| | || |||| || ||| ||| || ||||
Sbjct 47924 AGCAGAGGCTGATCTTTGCCTGGAAACAGCTCGAGGATGGCCGTACTTTGGCTGACTACA 47865
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| ||||| || |||||||| || || || || ||
Sbjct 47864 ACATTCAGAAGGAATCCACCCTTCACTTGGTTCT 47831
>seq22481
Length=674
Score = 102 bits (112), Expect = 7e-17
Identities = 152/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || ||||||||||||||||| || ||||||| |||| || ||| ||
Sbjct 143 ATGCAAATCTTCGTAAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGAGTTCC 202
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || || || ||| |||||| || || ||||| || ||||| ||||
Sbjct 203 GACACGATTGA--CAATGTCAAGACCAAAATCCAGGATAAGGAAGGCATCCCACCAGACC 260
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || || | || ||||| || ||||| | || || | ||||| ||| || ||||
Sbjct 261 AGCAAAGGCTGATCTTTGCTGGTAAACAGCTTGAGGACGGCCGCACCTTGGCTGACTACA 320
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| || || || || || || || || || || ||
Sbjct 321 ACATCCAGAAGGAGTCGACTCTTCACTTGGTCCT 354
>seq15779
Length=145502
Score = 102 bits (112), Expect = 7e-17
Identities = 152/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || || ||||| || ||||||| | || || || ||
Sbjct 121700 ATGCAAATCTTCGTCAAAACCTTAACCGGCAAGACCATCACTCTTGAGGTCGAAAGTTCC 121759
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||||||||| || || ||| ||| ||| ||||| |||||||| || || ||||
Sbjct 121760 GACACTATCGA--CAATGTCAAGACAAAGATCCAAGACAAGGAAGGGATCCCCCCAGACC 121817
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || || | || ||||| |||||||| | ||||| | |||||| | | || ||||
Sbjct 121818 AGCAAAGGCTGATCTTTGCTGGCAAACAGCTTGAAGACGGTCGCACCCTAGCTGACTACA 121877
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| ||||| || || || || || || || || ||
Sbjct 121878 ACATTCAGAAGGAGTCGACTCTTCACTTGGTTCT 121911
Score = 102 bits (112), Expect = 7e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||||||||| || || | ||||| | || || ||| |
Sbjct 122384 ATGCAAATCTTTGTGAAGACTTTGACGGGCAAGACTATCACCCTTGAGGTTGAGAGCAGT 122443
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| ||||| ||||| | || | ||| |||||||| || ||||| || |||||
Sbjct 122444 GACACCATCGACAATGTGAAGACCAAGATTCA-GGACAAAGAGGGTATTCCTCCAGACCA 122502
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | || ||||| || ||||| | || |||| |||||| | | || |||||
Sbjct 122503 GCAGAGGCTGATCTTTGCGGGGAAACAGCTTGAGGATGGGCGCACTTTAGCTGACTACAA 122562
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||| || || || || || || || || ||
Sbjct 122563 CATTCAGAAGGAGTCGACCCTTCACTTGGTCCT 122595
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| ||||| || || | ||||| | ||||| |||
Sbjct 122612 ATGCAGATCTTTGTCAAGACCTTGACTGGGAAGACTATCACTCTTGAAGTCGAGAGCAGC 122671
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| ||||| || ||| || || || || || || || |||||
Sbjct 122672 GACACGATCGACAATGTGAAGACGAAGATCCAGGATAAGGAGGGTATCCCGCCGGACCAG 122731
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || ||||| || || || || || |||| || || ||| |||||||||
Sbjct 122732 CAGAGGCTCATCTTTGCGGGAAAGCAGTTGGAGGATGGGCGTACGTTGGCTGATTACAAT 122791
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
||||| || |||||||| || ||
Sbjct 122792 ATTCAGAAGGAATCCACCCTTCA 122814
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/215 (69%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| ||||| || ||||| || || || ||| | || || | || || ||| |||
Sbjct 122156 ATGCAGATATTCGTGAAGACGTTAACTGGCAAAACGATTACCCTTGAGGTTGAGAGTTCT 122215
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| ||||| || || ||| || ||| || || || ||||| ||||||||||
Sbjct 122216 GACACCATCGA--CAATGTCAAGACTAAGATCCAAGATAAGGAGGGGATCCCACCTGACC 122273
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| || | || ||||| || || || | || || | || || ||| ||| || |
Sbjct 122274 AGCAGAGGCTGATCTTTGCTGGTAAGCAGCTTGAGGACGGGCGTACCTTGGCCGACTATA 122333
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211
| ||||| || || || || || || || || |||
Sbjct 122334 ACATTCAGAAGGAGTCGACTCTTCACTTGGTCCTA 122368
>seq15654
Length=163759
Score = 102 bits (112), Expect = 7e-17
Identities = 152/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || ||||||||||||||||| || ||||||| |||| || ||| ||
Sbjct 111559 ATGCAAATCTTCGTAAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGAGTTCC 111618
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || || || ||| |||||| || || ||||| || ||||| ||||
Sbjct 111619 GACACGATTGA--CAATGTCAAGACCAAAATCCAGGATAAGGAAGGCATCCCACCAGACC 111676
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || || | || ||||| || ||||| | || || | ||||| ||| || ||||
Sbjct 111677 AGCAAAGGCTGATCTTTGCTGGTAAACAGCTTGAGGACGGCCGCACCTTGGCTGACTACA 111736
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| || || || || || || || || || || ||
Sbjct 111737 ACATCCAGAAGGAGTCGACTCTTCACTTGGTCCT 111770
Score = 98.7 bits (108), Expect = 9e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || |||||||||||||| || || ||||||| |||| || |||
Sbjct 112015 ATGCAGATTTTCGTAAAGACTTTGACGGGAAAGACCATCACCCTCGAGGTCGAGAGCAGC 112074
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || ||||| | ||| | || | ||| || || || || || ||||| |||||
Sbjct 112075 GATACCATCGATAATGTAAAGACTAAGATTCA-AGATAAGGAGGGCATCCCACCGGACCA 112133
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | || ||||| || ||||| | || |||| ||| ||| ||| || |||||
Sbjct 112134 GCAGAGGCTGATCTTTGCTGGGAAACAGCTCGAGGATGGTCGTACTTTGGCTGACTACAA 112193
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||| || |||||||| || || || || ||
Sbjct 112194 CATTCAGAAGGAATCCACCCTTCACTTGGTCCT 112226
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/214 (70%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| || || || ||| | || || |||| || |||
Sbjct 111787 ATGCAGATCTTTGTTAAGACCTTAACTGGGAAAACGATTACCCTCGAGGTCGAGAGCAGC 111846
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || || || ||| || ||| || || || || || ||||||||||
Sbjct 111847 GACACAATTGA--CAATGTCAAGACTAAGATCCAAGATAAGGAGGGCATCCCACCTGACC 111904
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| || | || ||||| |||||||| | || |||| ||| ||| ||| || ||||
Sbjct 111905 AGCAGAGGCTGATCTTTGCTGGCAAACAGCTCGAGGATGGTCGTACTTTGGCTGACTACA 111964
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| ||||| || || ||||| || || || || ||
Sbjct 111965 ACATTCAGAAGGAGTCCACCCTTCACTTGGTCCT 111998
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || |||||||||||||| || || ||||||| | || || ||
Sbjct 112243 ATGCAGATTTTCGTAAAGACTTTGACTGGGAAGACCATCACCCTTGAGGTTGAAAGCAGC 112302
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| ||||| || ||| ||||| || || || ||||| |||||
Sbjct 112303 GACACGATCGACAATGTGAAGACGAAGATCCAGGACAAGGAGGGCATCCCACCAGACCAG 112362
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| | | || ||||| || ||||| | || || | ||| || ||| || ||||||
Sbjct 112363 CAGAGACTGATCTTTGCTGGGAAACAGCTCGAGGACGGTCGTACGTTGGCGGACTACAAT 112422
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTG 25208
|| ||||| || || || | || || |||
Sbjct 112423 ATCCAAAAGGAGTCTACTTTGCACTTGGTG 112452
>seq14479
Length=56811
Score = 96.9 bits (106), Expect = 3e-15
Identities = 147/207 (71%), Gaps = 8/207 (4%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| |||||||| || ||||||| |||| || ||| |||
Sbjct 51140 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACTCTCGAGGTCGAGAGCTCT 51081
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|||||||| || |||| || | |||||| || || || || ||||| || ||
Sbjct 51080 GACACTATTGACAACGTCA---AAAC-CAAAATCCAGGATAAGGAGGGTATTCCCCCAGA 51025
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||| || || |||| ||||| || || || | || |||| ||| ||| ||| ||| ||
Sbjct 51024 CCAGCAAAGGCTTATCTTTGCGGGAAAGCAGCTTGAGGATGGTCGTACTTTGGCCGACTA 50965
Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201
||| || || || || || || || ||
Sbjct 50964 CAACATCCAGAAGGAGTCTACCCTTCA 50938
>seq12168
Length=30050
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || | ||||||||||| || || | ||||| | || |||||| ||
Sbjct 8508 ATGCAGATCTTCTTGAAGACTTTGACAGGAAAGACGATCACGCTGGAGGTGGAGAGCTCG 8449
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | ||| |||||| ||| ||||| || || || || || |||||
Sbjct 8448 GACACCATTGACAACGTCAAGACAAAAATTCA-GGACAAGGAGGGTATCCCCCCAGACCA 8390
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| | | || ||||| || || || | || || | ||| || ||| ||| |||||
Sbjct 8389 ACAGAGATTGATATTTGCTGGAAAGCAGCTCGAGGACGGTCGTACGTTGGCCGACTACAA 8330
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTG 25208
|||||||| ||||| || || ||| | |||
Sbjct 8329 CATTCAAAAGGAATCGACCCTCCATCTGGTG 8299
>seq44981
Length=29031
Score = 89.7 bits (98), Expect = 4e-13
Identities = 115/157 (73%), Gaps = 4/157 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || ||||||||||||||||| || ||||||| |||| || ||| ||
Sbjct 10593 ATGCAAATCTTCGTAAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGAGTTCC 10534
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || || || ||| |||||| || || ||||| || ||||| ||||
Sbjct 10533 GACACGATTGA--CAATGTCAAGACCAAAATCCAGGATAAGGAAGGCATCCCACCAGACC 10476
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGA 25153
| || || | || ||||| || |||||| | || ||
Sbjct 10475 AGCAAAGGCTGATCTTTGCTGGTAAACAACTCGAGGA 10439
>seq44944
Length=25146
Score = 87.8 bits (96), Expect = 2e-12
Identities = 145/207 (70%), Gaps = 8/207 (4%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| |||||||| || ||||||| |||| || ||| |||
Sbjct 21008 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACTCTCGAGGTTGAGAGCTCT 20949
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|||||||| || |||| || | || ||| || || || || ||||| || ||
Sbjct 20948 GACACTATTGACAACGTCA---AAAC-CAAGATCCAGGATAAGGAGGGTATTCCCCCAGA 20893
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||| || || |||| ||||| || || || | || |||| ||| ||| ||| || ||
Sbjct 20892 CCAGCAAAGGCTTATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGTACTTTGGCTGACTA 20833
Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201
||| || || || || || || || ||
Sbjct 20832 CAACATCCAGAAGGAGTCTACCCTTCA 20806
>seq13580
Length=39997
Score = 87.8 bits (96), Expect = 2e-12
Identities = 140/196 (71%), Gaps = 5/196 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||||||||| ||||| | || || |||| |||||| ||
Sbjct 194 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACGATTACTCTCGAGGTGGAGAGCTCG 135
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | ||| |||||| ||| ||||| || || |||| || |||||
Sbjct 134 GACACCATTGACAACGTCAAGACAAAAATTCA-GGACAAGGAGGGTATTC--CCAGACCA 78
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACA-ATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | || ||||| || || || | || || | ||| || ||| ||| ||||
Sbjct 77 ACAGAGATTGATATTTGCTGGAAAGCAGCCTCGAGGACGGTCGTACATTGGCCGACTACA 18
Query 25177 ATATTCAAAAAGAATC 25192
| |||||||| |||||
Sbjct 17 ACATTCAAAAGGAATC 2
>seq44327
Length=9034
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || |||||||||||||| || || ||||||| | || || ||
Sbjct 7599 ATGCAGATTTTCGTAAAGACTTTGACTGGGAAGACCATCACCCTTGAGGTTGAAAGCAGC 7658
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| ||||| || ||| ||||| || || || ||||| |||||
Sbjct 7659 GACACGATCGACAATGTGAAGACGAAGATCCAGGACAAGGAGGGCATCCCACCAGACCAG 7718
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| | | || ||||| || ||||| | || || | ||| || ||| || ||||||
Sbjct 7719 CAGAGACTGATCTTTGCTGGGAAACAGCTCGAGGACGGTCGTACGTTGGCGGACTACAAT 7778
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTG 25208
|| ||||| || || || | || || |||
Sbjct 7779 ATCCAAAAGGAGTCTACTTTGCACTTGGTG 7808
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433089881930720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |