Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19] 45,088 sequences; 567,661,845 total letters Query= NC_009904.1 Length=142072 Score E Sequences producing significant alignments: (Bits) Value seq16093 91.5 1e-13 seq4271 91.5 1e-13 >seq16093 Length=196541 Score = 91.5 bits (100), Expect = 1e-13 Identities = 72/84 (86%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 136988 TGCAGGTCTCGAACCTGCGACCGTTCG-GTTATGAGCCGAATGCTCTGACCAACTGAGCT 137046 |||||||||||||||||||||| |||| ||||| ||| | ||||| |||||||||||| Sbjct 126216 TGCAGGTCTCGAACCTGCGACC-TTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCT 126158 Query 137047 AAACGTCCTTAATATAATTAGTTG 137070 || | ||||||||| |||||||| Sbjct 126157 AATAGGCCTTAATATTATTAGTTG 126134 >seq4271 Length=7765 Score = 91.5 bits (100), Expect = 1e-13 Identities = 72/84 (86%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 136988 TGCAGGTCTCGAACCTGCGACCGTTCG-GTTATGAGCCGAATGCTCTGACCAACTGAGCT 137046 |||||||||||||||||||||| |||| ||||| ||| | ||||| |||||||||||| Sbjct 5411 TGCAGGTCTCGAACCTGCGACC-TTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCT 5353 Query 137047 AAACGTCCTTAATATAATTAGTTG 137070 || | ||||||||| |||||||| Sbjct 5352 AATAGGCCTTAATATTATTAGTTG 5329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454246242447360