Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19]
45,088 sequences; 567,661,845 total letters
Query= NC_015279.1
Length=190789
Score E
Sequences producing significant alignments: (Bits) Value
seq11475 563 1e-155
seq15224 279 6e-70
seq8938 176 5e-39
seq15824 154 2e-32
seq12771 140 4e-28
seq12877 136 5e-27
seq10333 129 7e-25
seq13902 105 8e-18
seq14024 100 3e-16
seq15982 95.1 1e-14
seq45009 86.0 8e-12
seq15243 82.4 9e-11
seq14799 82.4 9e-11
>seq11475
Length=22225
Score = 563 bits (624), Expect = 1e-155
Identities = 737/1015 (73%), Gaps = 4/1015 (0%)
Strand=Plus/Minus
Query 181424 TTTGACATCCTTGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 181483
||||| || | ||||||||| | | ||||| || || ||||| || ||||||||
Sbjct 12883 TTTGATATTATGGATGACTGGTTACGTAGAGACCGTTTCGTTTTTGTAGGTTGGTCTGGT 12824
Query 181484 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGGGGCTGGCTCACTGGCACTACTTTT 181543
||| | || ||||| ||||||| | || | ||||| ||| | || || || || |||
Sbjct 12823 CTATTGCTCTTTCCTTGTGCTTATTTCGCTGTAGGGGGTTGGTTTACAGGTACGACGTTT 12764
Query 181544 GTTACGTCGTGGTACACCCACGGATTGGCGTCTTCCTACCTTGAGGG-TGCTAATTTCCT 181602
|| || || ||||| || || || ||||| ||| || | || || ||| |||||| |
Sbjct 12763 GTAACTTCATGGTATACTCATGGGTTGGCCAGTTCATATTTGGAAGGCTGC-AATTTCTT 12705
Query 181603 TACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 181662
|| || || || || || |||||| | | | | || ||| | | | || |||||
Sbjct 12704 AACCGCAGCCGTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTGCTGTGGGG 12645
Query 181663 TCCTGAAGCTCAGGGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGGCTTTTGT 181722
||||||||| || |||||||| || ||| ||| | || || || ||| |||||||
Sbjct 12644 TCCTGAAGCACAAGGCGATTTTACTCGTTGGTGTCAATTAGGCGGCCTGTGGACTTTTGT 12585
Query 181723 GGCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACTTGCTCG 181782
|| || || || || |||| || || ||||||||| | | ||||| |||||||||||
Sbjct 12584 TGCTCTTCATGGTGCTTTCGGACTAATAGGTTTTATGTTACGCCAATTCGAACTTGCTCG 12525
Query 181783 -TCTAATCGGAATCCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGCTGTATTCG 181841
||| || | | || || || ||||| || || || || || || |||||||| || |
Sbjct 12524 ATCTGTTCA-ATTGCGCCCTTATAATGCAATAGCATTCTCGGGCCCAATTGCTGTTTTTG 12466
Query 181842 TCTCTGTATTTCTCATCTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTTCG 181901
| |||||||| || || ||||| || || ||||| |||||||||||||||| ||||| |
Sbjct 12465 TTTCTGTATTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTG 12406
Query 181902 GTGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCA 181961
|||| || || ||||| || ||| | ||||| | || || ||||||||||||||||| |
Sbjct 12405 GTGTAGCAGCTATTTTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACGCTGA 12346
Query 181962 ATCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAATTC 182021
| || || ||||||||||| ||||||||| | |||| | ||| | || | || ||||
Sbjct 12345 ACCCTTTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCCGCTCTGCTATGCGCTATTC 12286
Query 182022 ACGGTGTGACCGTGGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATACTTTCAAAG 182081
| |||| ||||| || |||||| | | | || ||||| |||||||| ||| |
Sbjct 12285 ATGGTGCTACCGTAGAAAATACTTTATTCGAGGATGGTGATGGGGCAAATACATTCCGGG 12226
Query 182082 CATTCGATTCAACTCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGCTTCTGGT 182141
| || | ||||||||| |||||||| ||||||||||| || || ||||| || ||||
Sbjct 12225 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGTTTTTGGT 12166
Query 182142 CTCAGATCTTCGGTATTGCGTTTAGCAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTG 182201
| || || || || |||| ||| |||||| | ||||| |||||||||||| | ||||
Sbjct 12165 CCCAAATTTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 12106
Query 182202 TTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTC 182261
| || || | ||| | |||| ||| | | || | | ||||| || | ||||| |
Sbjct 12105 TACCAGTAACCGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTCTGGCCTTGAACCTAC 12046
Query 182262 GTGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAGAAGACCCAGAGTTCGAGACGT 182321
|||| |||||||| || ||||||||||| | ||| | ||||| || || || ||||| |
Sbjct 12045 GTGCCTATGACTTCGTTTCCCAAGAAATACGTGCAGCCGAAGATCCTGAATTTGAGACTT 11986
Query 182322 TCTACACAAAGAACATTCTCTTGAATGAAGGTCTGCGTGCATGGTTAGCACCAGTCGATC 182381
||||||| || || |||||||| ||||||||| | ||||| ||| | || | ||||
Sbjct 11985 TCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATC 11926
Query 182382 AACCACATGAGAACTTTGTGTTCCCTGAGGAAGTATTACCCAGAGGTAACGCACT 182436
| || ||||| ||| || | ||||||||||| || ||||| | || ||||| ||
Sbjct 11925 AGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 11871
>seq15224
Length=172684
Score = 279 bits (308), Expect = 6e-70
Identities = 304/404 (75%), Gaps = 0/404 (0%)
Strand=Plus/Plus
Query 180135 GCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAA 180194
|||||||| ||||| || || || || |||| || ||| | ||||||| | ||||||
Sbjct 89319 GCATATTCAGCTCCGGTTGCAGCGGCTACTGCCGTTTTCTTGATCTATCCAATTGGTCAA 89378
Query 180195 GGTTCATTCTCTGACGCAATGCCCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGTT 180254
|| || ||||| | ||||| | || |||||||| || ||||||| |||| ||||
Sbjct 89379 GGAAGCTTTTCTGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAACTTCATGATTGTA 89438
Query 180255 TTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGTC 180314
||||| || |||||||||||||| |||||||| || |||||| |||| ||||| |||||
Sbjct 89439 TTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTGGGTGTAGCTGGTGTA 89498
Query 180315 TTCGGCGGTTCACTGTTCTCCGCAATGCACGGTTCACTGGTTACCTCTTCACTGGTTCGT 180374
|||||||| || || || || ||||| ||||| |||| || ||| || || |
Sbjct 89499 TTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATTAGG 89558
Query 180375 GAAACCACTGAAACTGAGTCCCAGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACC 180434
|||||||| |||| ||| || || | ||||||| ||||||||||| ||||| ||
Sbjct 89559 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACT 89618
Query 180435 TACAACATCGTTGCTGCACATGGATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTTC 180494
|| || ||||| ||||| |||| || || ||||| |||||||||| ||||| |||
Sbjct 89619 TATAATATCGTAGCTGCTCATGTTTATTTTGGTCGATTGATCTTCCAATATGCTAGTTTC 89678
Query 180495 AACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGT 180538
||||| |||||||| | ||||||||| | || || ||||| ||
Sbjct 89679 AACAATTCCCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCGGT 89722
Score = 118 bits (130), Expect = 1e-21
Identities = 135/182 (74%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 180405 GGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACATGGATACTTC 180464
||||||| ||||||||||| ||||| || || || ||||| ||||| ||||| || ||
Sbjct 89734 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTT 89793
Query 180465 GGTCGTCTGATCTTC------CAGTATGCATCGTTCAACAACTCCCGTTCACTTCACTTC 180518
||||| |||||||| || ||||| |||||||| || ||||| | ||||||
Sbjct 89794 GGTCGATTGATCTTCCAATATCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTC 89853
Query 180519 TTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATG 180578
||| | || || ||||| || || || || ||||| ||||| | || | ||||| |||
Sbjct 89854 TTCTTAGCTGCTTGGCCGGTAGTCGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATG 89913
Query 180579 GC 180580
||
Sbjct 89914 GC 89915
>seq8938
Length=12132
Score = 176 bits (194), Expect = 5e-39
Identities = 237/328 (72%), Gaps = 4/328 (1%)
Strand=Plus/Minus
Query 182111 TATTCAATGGTTACAGCGAACCGCTTCTGGTCTCAGATCTTCGGTATTGCGTTTAGCAAT 182170
|||| ||| | || || ||||| || ||||| || | || || |||| ||| ||||
Sbjct 2048 TATTTAAT--TCACCGCTAACCGTTTTTGGTCCCAACTTTTTGGGGTTGCTTTTTCCAAT 1991
Query 182171 AAGAGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCC 182230
|| || ||||| |||||||||||| | ||||| || || | | | | |||| ||| |
Sbjct 1990 AAAAGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGTTTTATGGATGAGTGCT 1931
Query 182231 ATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAAATC 182290
| || | | ||||| || | ||||| ||||| |||||||| || |||||||||||
Sbjct 1930 CTTGGGGTAGTCGGTCTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCCCAAGAAATA 1871
Query 182291 A--GAGCATCAGAAGACCCAGAGTTCGAGACGTTCTACACAAAGAACATTCTCTTGAATG 182348
| ||| | ||||| || || || ||||| |||||||| || || |||||||| ||||
Sbjct 1870 TACGTGCAGCCGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAATG 1811
Query 182349 AAGGTCTGCGTGCATGGTTAGCACCAGTCGATCAACCACATGAGAACTTTGTGTTCCCTG 182408
||||| | ||||| ||| | | | ||||| || ||||| ||| || | |||||||
Sbjct 1810 AAGGTATTCGTGCTTGGATGGTGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTG 1751
Query 182409 AGGAAGTATTACCCAGAGGTAACGCACT 182436
|||| || ||||| | || ||||| ||
Sbjct 1750 AGGAGGTTCTACCCCGTGGAAACGCTCT 1723
>seq15824
Length=139560
Score = 154 bits (170), Expect = 2e-32
Identities = 182/243 (75%), Gaps = 4/243 (2%)
Strand=Plus/Minus
Query 181739 TTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACTTGCTCG-TCTAATCGGAATCCG 181797
|||| || || ||||||| | | ||||| ||||||||||| |||| | | | ||
Sbjct 61356 TTCGGACTAATAAGTTTTAT--TACGCCAATTCGAACTTGCTCGATCTATTTA-ATTGCG 61300
Query 181798 ACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGCTGTATTCGTCTCTGTATTTCTCAT 181857
|| || ||||| || || || || || || |||||||| || || |||||||| || ||
Sbjct 61299 CCCTTATAATGCAATAGCATTCTCGGGCCCAATTGCTGTTTTTGTTTCTGTATTCCTAAT 61240
Query 181858 CTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTTCGGTGTCGCGGCGATTTT 181917
||||| || | ||||| |||||||||||||||| ||||| ||||| || || |||||
Sbjct 61239 TTATCCACTAGATCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATTTT 61180
Query 181918 CCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGAT 181977
|| ||| | || || | || || |||||||||||||||| || | || ||||||||
Sbjct 61179 TCGATTCATCCTATTTTTTCAAGGGTTTCATAATTGGACGCAGAACTCTTTTCATATGAT 61120
Query 181978 GGG 181980
|||
Sbjct 61119 GGG 61117
>seq12771
Length=31889
Score = 140 bits (154), Expect = 4e-28
Identities = 181/247 (73%), Gaps = 6/247 (2%)
Strand=Plus/Minus
Query 181739 TTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACTTGCTCG-TCTAATCGGAATCCG 181797
|||| || || ||||||||| | | ||||| ||||||||||| ||| || | | ||
Sbjct 8615 TTCGGACTAATAGGTTTTATGTTACGCCAATTCGAACTTGCTCGATCTGTTCA-ATTGCG 8557
Query 181798 ACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGCTGTATTCGTCTCTGTATTTCTCAT 181857
|| || ||||| || || || || || | |||| ||| || || |||||||| || ||
Sbjct 8556 CCCTTATAATGCAATAGCATTCTCGGGCCAAATTGTTGTTTTTGTTTCTGTATTCCTAAT 8497
Query 181858 CTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTTCGG----TGTCGCGGCGA 181913
||||| || | ||||| |||||||||||||||| ||||| || ||| || | |
Sbjct 8496 TTATCCACTAGATCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTATGTAGCAACTA 8437
Query 181914 TTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATA 181973
|||| || | | | ||||| | | || ||||||||||||||| | || || || ||||
Sbjct 8436 TTTTTCGATCCATCCTCTTTTTTCGAGGGTTTCATAATTGGACGTTGAACCCTTTTCATA 8377
Query 181974 TGATGGG 181980
|||||||
Sbjct 8376 TGATGGG 8370
>seq12877
Length=40778
Score = 136 bits (150), Expect = 5e-27
Identities = 140/183 (77%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 182254 CAACCTTCGTGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAGAAGACCCAGAGTT 182313
|| |||| |||| |||||||| || ||||||||||| | ||| | ||||| || || ||
Sbjct 742 CACCCTTAGTGCCTATGACTTCGTTTCCCAAGAAATACGTGCAGCCGAAGATCCTGAATT 801
Query 182314 CGAGACGTTCTACACAAAGAACATTCTCTTGAATGAAGGTCTGCGTGCATGGTTAGCACC 182373
||||| |||||||| || || |||||||| ||||||||| | ||||| ||| | || |
Sbjct 802 TGAGACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCTTGGATGGCGGC 861
Query 182374 AGTCGATCAACCACATGAGAACTTTGTGTTCCCTGAGGAAGTATTACCCAGAGGTAACGC 182433
||||| || ||||| ||| || | ||||||||||| || ||||| | || |||||
Sbjct 862 TCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGC 921
Query 182434 ACT 182436
||
Sbjct 922 TCT 924
>seq10333
Length=16991
Score = 129 bits (142), Expect = 7e-25
Identities = 172/239 (72%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 181984 TGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAATTCACGGTGTGACCGTGGAGAATAC 182043
||||||| | |||| | ||| | || | || ||||| |||| ||||| || |||||
Sbjct 6646 TGCTGGTGTATTGGGCGCCGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATAC 6705
Query 182044 TCTGTATCAAGACGGTGACCAAGCAAATACTTTCAAAGCATTCGATTCAACTCAAGAAGA 182103
| | | | || ||||| |||||||| ||| || || | ||||||||| ||
Sbjct 6706 TTTATTCGAGGATGGTGATGGGGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGA 6765
Query 182104 AGAAACCTATTCAATGGTTACAGCGAACCGCTTCTGGTCTCAGATCTTCGGTATTGCGTT 182163
|||||| ||||||||||| || || ||||| || ||||| || || || || |||| ||
Sbjct 6766 AGAAACTTATTCAATGGTCACCGCTAACCGTTTTTGGTCCCAAATTTTTGGGGTTGCTTT 6825
Query 182164 TAGCAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTTTGGA 182222
| |||||| | ||||| |||||||||||| | ||||| || || | ||| | ||||
Sbjct 6826 TTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACAGGTTTATGGA 6884
>seq13902
Length=44788
Score = 105 bits (116), Expect = 8e-18
Identities = 248/364 (68%), Gaps = 14/364 (4%)
Strand=Plus/Minus
Query 181481 GGACTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGGGGCTGGCTCACTGGCACTACT 181540
|| ||| | || ||||| ||||||| | || | ||||| ||| | || | || ||
Sbjct 6444 GGTCTATTGCTCTTTCCTTGTGCTTAT-TCGCTGTAGGGGGTTGGTTTACAAGTACGACG 6386
Query 181541 TTTGTTACGTCGTGGTACACCCACGGATTGGCGTCTT--CC--TACCT---TGA--GGGT 181591
||||| || || ||||| || || || ||||| ||| || | | | ||| || |
Sbjct 6385 TTTGTAACCTCATGGTATACTCATGGGTTGGCCACTTGGCCAGTTCATATTTGAAAGGCT 6326
Query 181592 GCTAATTTCCTTACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTT 181651
| ||||||| | || || ||||| || || |||||| | | | | || ||| || ||
Sbjct 6325 G-TAATTTCTTAACCGCAGCTGTTTCCACTCCTGCTAATAGTTTAGCACACTCTTTTGTT 6267
Query 181652 CTA-CTTTGGGGTCCTGAAGCTCAGGGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACT 181710
| || ||| |||||||||| || |||||||| || ||| ||| | || || |
Sbjct 6266 GTTTCTGTGGAGTCCTGAAGCACAAGGCGATTTTACTCGTTGGTGTCAATTAGGCGGCCC 6207
Query 181711 CTGGGCTTTTGTGGCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATT 181770
||| ||||||| | || || || || ||| || || ||||||||| | | |||||
Sbjct 6206 GTGGACTTTTGTTGATCTTCATGGTGCTTTCAGACTAATAGGTTTTATGTTACGCCAATT 6147
Query 181771 TGAACTTGCTCG-TCTAATCGGAATCCGACCCTACAATGCGATTGCTTTTTCCGGTCCTA 181829
||||||||||| ||| || | | || || || ||||| || || || || || || |
Sbjct 6146 CGAACTTGCTCGATCTGTTC-AATTGCGCCCTTATAATGCAATAGCATTCTCGGGCCCAA 6088
Query 181830 TTGC 181833
||||
Sbjct 6087 TTGC 6084
>seq14024
Length=49420
Score = 100 bits (110), Expect = 3e-16
Identities = 245/366 (67%), Gaps = 9/366 (2%)
Strand=Plus/Plus
Query 181424 TTTGACATCCTTGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 181483
||||| || | ||||||||| | | || | || || ||||| || | ||| ||
Sbjct 34637 TTTGATATTATGGATGACTGGTTACGTAGAGATCATTTCGTTTTTGTAGGTTAGTCGGGT 34696
Query 181484 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGGGGCTGGCTCACT-----GGCACTA 181538
||| | || ||||| ||||||| |||| | ||||| ||| | | | || || |
Sbjct 34697 CTATTGCTCTTTCCTTGTGCTTATTTTGCTGTAGGGGGTTGGTTTAATTTACAGGTACGA 34756
Query 181539 CTTTTGTTACGTCGTGGTACACCCACGGATTGGCGTCTTCCTACCTTGAGGG-TGCTAAT 181597
| ||||| || || ||||| || || || |||| ||| || | || || ||| |||
Sbjct 34757 CGTTTGTAACTTCATGGTATACTCATGGGATGGCCAGTTCATATTTGGAAGGCTGC-AAT 34815
Query 181598 TTCCTTACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTT 181657
||| | || || | || || |||||| | | | | || ||| || || | ||
Sbjct 34816 TTCTTAACCGCAATCGATTCTACTCCTGCTAATAGTTTAGCACACTCT-TTGTTGTTGTT 34874
Query 181658 -TGGGGTCCTGAAGCTCAGGGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGGC 181716
|||||||||||||| || |||||||| || ||| ||| | || || | ||| |
Sbjct 34875 GTGGGGTCCTGAAGCACAAGGCGATTTTACTCGTTGGCGTCAATTAGGCGGCCAGTGGAC 34934
Query 181717 TTTTGTGGCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACT 181776
|||||| || || || || || |||| || || ||| ||||| | | ||||| ||||
Sbjct 34935 TTTTGTTGCTCTTCATGGTGCTTTCGGACTAATAGGTCTTATGTTACGCCAATTCAAACT 34994
Query 181777 TGCTCG 181782
||||||
Sbjct 34995 TGCTCG 35000
>seq15982
Length=164312
Score = 95.1 bits (104), Expect = 1e-14
Identities = 183/269 (68%), Gaps = 11/269 (4%)
Strand=Plus/Plus
Query 182177 TGGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGT 182236
|| || |||||||||||| | ||||| || | | ||| | |||| ||| | | |
Sbjct 21389 TGATTACATTTCTTTATGTTGTTTGTACCAATAACCGGTTTATGGATGAGTGCTCTTGAG 21448
Query 182237 ATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAAATCAGAGCA 182296
| | ||| | || | ||||| ||||| |||||||| || |||||||| | | | |||
Sbjct 21449 TTAGTCGGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCCCAAGATAAC-GTGCA 21507
Query 182297 TCAGAAGACCCAGAGTTCGAGACGTTCTACACAAAGAACATTCTCTTGAATGAAGG---- 182352
| ||||| || | || ||||| |||||||| | || |||||| | ||||||||
Sbjct 21508 GCTGAAGATCCTAAATTTGAGACTTTCTACACCAGAAATATTCTC-TCAATGAAGGTATT 21566
Query 182353 -----TCTGCGTGCATGGTTAGCACCAGTCGATCAACCACATGAGAACTTTGTGTTCCCT 182407
| | ||||| ||| | || | ||||| || ||||| ||| || | ||||||
Sbjct 21567 CAGGTTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCT 21626
Query 182408 GAGGAAGTATTACCCAGAGGTAACGCACT 182436
||| | | ||||| | || ||||| ||
Sbjct 21627 GAGAAGGCTCTACCCTGTGGAAACGCTCT 21655
>seq45009
Length=33691
Score = 86.0 bits (94), Expect = 8e-12
Identities = 126/176 (72%), Gaps = 2/176 (1%)
Strand=Plus/Minus
Query 181659 GGGGTCCTGAAGCTCAGGGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGGCTT 181718
|| |||||||||| || |||||||| || ||| ||| | || || | ||| |||
Sbjct 13923 GGNGTCCTGAAGCACAAGGCGATTTTACTCGTTGGTGTCAATTAGGCGGCCCGTGGACTT 13864
Query 181719 TTGTGGCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACTTG 181778
|||| || || || || || |||| || || ||||||||| | | ||||| |||||||
Sbjct 13863 TTGTTGCTCTTCATGGTGCTTTCGGACTAATAGGTTTTATGTTACGCCAATTCGAACTTG 13804
Query 181779 CTCG-TCTAATCGGAATCCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGC 181833
|||| ||| || | | || || || ||||| || || || || || || |||||
Sbjct 13803 CTCGATCTGTTC-AATTGCGCCCTTATAATGCAATAGCATTCTCGGGCCCAATTGC 13749
>seq15243
Length=83818
Score = 82.4 bits (90), Expect = 9e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313
|||||||||||||||| || ||||| | || ||||||| | ||||||||||||| |||
Sbjct 60133 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGATTGGTCGTAGGTTCGAAT 60074
Query 141314 CCTACCTGGGGAG 141326
||||| |||||||
Sbjct 60073 CCTACTTGGGGAG 60061
>seq14799
Length=93102
Score = 82.4 bits (90), Expect = 9e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313
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Sbjct 51483 TTCCTTAGTAGCTCAGTGGTAGAGCGGTCGACTGTTAACTGATTGGTCGTAGGTTCGAAT 51542
Query 141314 CCTACCTGGGGAG 141326
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Sbjct 51543 CCTACTTGGGGAG 51555
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 610052780363520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |