Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19]
45,088 sequences; 567,661,845 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq13853 114 1e-20
seq12168 111 1e-19
seq16149 109 4e-19
seq14479 109 4e-19
seq15779 105 5e-18
seq44944 100 2e-16
seq13717 98.7 8e-16
seq15753 96.9 3e-15
seq15654 93.3 3e-14
seq15600 93.3 3e-14
seq13580 93.3 3e-14
seq37662 87.8 1e-12
seq5777 82.4 6e-11
>seq13853
Length=43806
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| || || | ||| ||||| ||||| ||||| || ||||| ||||| | || | |
Sbjct 19549 ACGCAACACCAGATGGAGGGTCGATTCCTTTTGAATGTTGTAGTCGGCCAACGTACGACC 19490
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
|| || | ||||| || ||||||||||| | |||||| || || || || || || ||
Sbjct 19489 GTCCTCGAGCTGCTTTCCAGCAAATATCAATCTCTGTTGGTCTGGGGGGATACCCTCCTT 19430
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|| ||||||||| || || | || | ||||| || | ||||| || |||||||
Sbjct 19429 GTCCTGAATTTTTGTCTTGACGTTGTCAATGGTGTCCGAGCTCTCCACCTCTAGAGTGAT 19370
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||| || || || ||||| || || || || |||||
Sbjct 19369 CGTCTTTCCTGTCAAAGTCTTCACGAAGATTTGCAT 19334
Score = 107 bits (118), Expect = 2e-18
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| || || | ||| ||||| ||| |||| | || ||||| ||||| | || | |
Sbjct 9509 ACGCAACACCAGATGGAGGGTCGATCCTTT--GAATGTTGTAGTCGGCCAATGTACGACC 9452
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
|| || | ||||| || ||||||||||| | |||||| || || ||||| || || ||
Sbjct 9451 GTCCTCGAGCTGCTTTCCAGCAAATATCAATCTCTGTTGGTCTGGGGGAATACCCTCCTT 9392
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|| ||||||||| || || | || | ||||| || | ||||| || ||||| |
Sbjct 9391 GTCCTGAATTTTTGTCTTGACGTTGTCAATGGTGTCCGAGCTCTCCACCTCGAGAGTAAT 9332
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||| || || || ||||| || || || ||||||||
Sbjct 9331 CGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 9296
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| || || || || |||||||| ||||| | ||| | | | || |||| ||||
Sbjct 19992 TGGAGGGTCGACTCCTTCTGAATATTGTAGTCGGCCAGAGTACGGCCGTCTTCCATTTGC 19933
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| |||||||||||||| | ||||| || || ||||| || || || || || || ||
Sbjct 19932 TTCCCTGCAAATATCAACCTTTGTTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTG 19873
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | |||||| | ||||| || || |||| || || || ||
Sbjct 19872 GTCTTCACATTGTCGATCGTGTCACTGCTCTCCACCTCCAGGGTGATGGTCTTTCCTGTC 19813
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
|| || || || || ||||||||
Sbjct 19812 AACGTCTTCACGAAAATCTGCAT 19790
Score = 102 bits (112), Expect = 6e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| || || || || | ||||| || ||||| ||||||||||| || | || | | |
Sbjct 19093 ACGCAACACCAAGTGCAAAGTAGACTCCTTTTGAATATTGTAATCTGCCAATGTGCGGCC 19034
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
|| || | |||||| || ||||| ||||| | || || || || ||||| || || ||
Sbjct 19033 GTCCTCGAGTTGCTTCCCAGCAAAAATCAACCTTTGCTGGTCCGGAGGAATACCCTCCTT 18974
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
||| ||||| || || || | || | ||||| || | || || || ||||| |
Sbjct 18973 ATCCTGAATCTTAGTCTTAACGTTGTCAATTGTGTCCGAGCTCTCTACCTCGAGAGTAAT 18914
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||| || || || ||||| || || || ||||||||
Sbjct 18913 CGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 18878
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || | |||||| || || | ||| || || || || ||||| || || || |||||
Sbjct 9748 CCACCACGTAAACGCAACACCAGATGGAGAGTTGACTCCTTTTGAATGTTATAGTCGGCC 9689
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | |||| || | ||||| ||||| || ||||||||||| || || || ||
Sbjct 9688 AATGTGCGCCCATCCTCGAGCTGCTTTCCTGCGAAAATCAAACGCTGCTGGTCCGGTGGG 9629
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||| || || || || || ||| || || | || | ||||| | || ||
Sbjct 9628 ATGCCCTCCTTGTCCTGGATCTTTGTCTTGACGTTGTCGATGGTGTCGCTGCTCTCAACC 9569
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| ||||||| || || || || || || |||||||| ||||||||
Sbjct 9568 TCGAGAGTGATGGTCTTCCCCGTCAAGGTCTTTACAAAAATCTGCAT 9522
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| || || || || |||||||| ||||| | ||| | | | || |||| |||
Sbjct 9952 TGGAGGGTCGACTCCTTCTGAATATTGTAGTCGGCCAGAGTACGGCCGTCTTCCATCTGC 9893
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| |||||||||||||| | ||||| || || ||||| || || || || || || ||
Sbjct 9892 TTCCCTGCAAATATCAACCTTTGTTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTG 9833
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | |||||| | ||||| || || |||| || || || ||
Sbjct 9832 GTCTTCACATTGTCGATCGTGTCACTGCTCTCCACCTCCAGGGTGATGGTCTTTCCTGTC 9773
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
|| || || || || || |||||
Sbjct 9772 AACGTCTTCACGAAAATTTGCAT 9750
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || | |||||| || || | ||| || || || || ||||| || || || |||||
Sbjct 19788 CCACCACGTAAACGCAACACCAGATGGAGAGTTGACTCCTTTTGAATGTTATAGTCGGCC 19729
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | |||| || | ||||| ||||| || ||||||||||| || || || ||
Sbjct 19728 AATGTGCGCCCATCCTCGAGCTGCTTTCCTGCGAAAATCAAACGCTGCTGGTCCGGTGGG 19669
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||| || || || || || ||| || || | || | ||||| | || ||
Sbjct 19668 ATGCCCTCCTTGTCCTGGATCTTTGTCTTGACGTTGTCGATGGTGTCGCTGCTCTCAACC 19609
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || |||| || || || || || || || || || ||||||||
Sbjct 19608 TCGAGGGTGATAGTCTTCCCAGTCAAGGTCTTCACGAAAATCTGCAT 19562
>seq12168
Length=30050
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| || || | ||| ||||| ||||| ||||| || ||||| ||||| | || | |
Sbjct 8293 ACGCAACACCAGATGGAGGGTCGATTCCTTTTGAATGTTGTAGTCGGCCAACGTACGACC 8352
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
|| || | ||||| || ||||||||||| | |||||| || || || || || || ||
Sbjct 8353 GTCCTCGAGCTGCTTTCCAGCAAATATCAATCTCTGTTGGTCTGGGGGGATACCCTCCTT 8412
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|| ||||||||| || || | || | ||||| || | ||||| || || ||||
Sbjct 8413 GTCCTGAATTTTTGTCTTGACGTTGTCAATGGTGTCCGAGCTCTCCACCTCCAGCGTGAT 8472
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||| || || || ||||| || | || ||||||||
Sbjct 8473 CGTCTTTCCTGTCAAAGTCTTCAAGAAGATCTGCAT 8508
>seq16149
Length=224952
Score = 109 bits (120), Expect = 4e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| ||||| || || || ||||| ||||||| || | | | || || | ||
Sbjct 103665 TGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGTGTACGGCCGTCTTCAAGCTGT 103606
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || || | ||| ||||| ||||| || |||||||| || |||||||||||
Sbjct 103605 TTTCCGGCGAAGATGAGACGTTGTTGGTCGGGAGGGATGCCTTCCTTGTCTTGAATTTTG 103546
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | ||||| || | ||| || || | || | ||| || || |||
Sbjct 103545 GTCTTCACATTGTCGATGGTGTCGGAGGATTCAACCTCCAATGTTATCGTCTTCCCCGTT 103486
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| ||||| || |||||||||||
Sbjct 103485 AGGGTTTTCACGAATATCTGCAT 103463
>seq14479
Length=56811
Score = 109 bits (120), Expect = 4e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||||||||| || || || || ||||| ||||| | ||| | |||| || | |||
Sbjct 50938 TGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGACCATCCTCAAGCTGC 50997
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || ||||| || | | || || || || ||||| || || ||||| || |||||
Sbjct 50998 TTTCCCGCAAAGATAAGCCTTTGCTGGTCTGGGGGAATACCCTCCTTATCCTGGATTTTG 51057
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| || | || | ||||||||| | || || || ||||||| || ||||||||
Sbjct 51058 GTTTTGACGTTGTCAATAGTGTCAGAGCTCTCGACCTCGAGAGTGATGGTCTTGCCGGTC 51117
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
|| || || || || ||||||||
Sbjct 51118 AAGGTCTTGACGAAGATCTGCAT 51140
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || ||||||||||| || || || || ||||| || || | ||| | | | || ||
Sbjct 51388 ACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTGCGGCCGTCCTCG 51447
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| |||||| || || || |||| ||| || || || || || || ||||| || || ||
Sbjct 51448 AGTTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCTGGGGGGATCCCTTCCTTGTCCTGG 51507
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
||||| || ||| | || | ||||| || | || || || ||||||| || |||
Sbjct 51508 ATTTTGGTCTTGACATTGTCGATTGTGTCGGAACTCTCGACCTCGAGAGTGATTGTCTTG 51567
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | || || || || || |||||
Sbjct 51568 CCAGTGAGGGTCTTAACGAAGATTTGCAT 51596
>seq15779
Length=145502
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 101252 AAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311
||||| | ||| || ||||| || || || || || || ||||| || || | || |
Sbjct 121917 AAACGGAGAACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGCTAGGGTGCGA 121858
Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371
| || || | || || || ||||| |||| | || || || || || || |||||
Sbjct 121857 CCGTCTTCAAGCTGTTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGGGGGATCCCTTCC 121798
Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431
|| ||||| || ||| || ||| | || | |||||| || |||| || |||||||||
Sbjct 121797 TTGTCTTGGATCTTTGTCTTGACATTGTCGATAGTGTCGGAACTTTCGACCTCAAGAGTG 121738
Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
| || ||||||||||| ||||| || || || |||||
Sbjct 121737 ATGGTCTTGCCGGTTAAGGTTTTGACGAAGATTTGCAT 121700
Score = 105 bits (116), Expect = 5e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||||| || || ||||| || || || || || || || || ||||| | || | |
Sbjct 122371 ACGTAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTATAGTCGGCCAAGGTACGCCC 122312
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
|| || | |||||||| ||||| |||| | ||| || || || || || || || ||
Sbjct 122311 GTCCTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGTGGGATCCCCTCCTT 122252
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|||||| || || || ||| | || | |||||||| | || || ||||| || |
Sbjct 122251 ATCTTGGATCTTAGTCTTGACATTGTCGATGGTGTCAGAACTCTCAACCTCAAGGGTAAT 122192
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||||||| ||||| || || || |||||||||||
Sbjct 122191 CGTTTTGCCAGTTAACGTCTTCACGAATATCTGCAT 122156
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|||||||| ||||| || || ||||||||||| || | || | |||| ||||| |||
Sbjct 122814 TGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCCAACGTACGCCCATCCTCCAACTGC 122755
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || ||||| || | | ||| || || ||||| || || || ||||| || || ||
Sbjct 122754 TTTCCCGCAAAGATGAGCCTCTGCTGGTCCGGCGGGATACCCTCCTTATCCTGGATCTTC 122695
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | ||||| | || ||||||||||||| || || || ||
Sbjct 122694 GTCTTCACATTGTCGATCGTGTCGCTGCTCTCGACTTCAAGAGTGATAGTCTTCCCAGTC 122635
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
|| || || ||||| ||||||||
Sbjct 122634 AAGGTCTTGACAAAGATCTGCAT 122612
>seq44944
Length=25146
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||||||||| || || || || ||||| || || | ||| | |||| || | |||
Sbjct 20806 TGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTACGACCATCCTCAAGCTGC 20865
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || ||||| || | | || || || || ||||| || || ||||| || || ||
Sbjct 20866 TTTCCAGCAAAGATAAGCCTTTGCTGGTCTGGGGGAATACCCTCCTTATCCTGGATCTTG 20925
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| || | || | ||||||||| | || || || ||||||| || ||||||||
Sbjct 20926 GTTTTGACGTTGTCAATAGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTGCCGGTC 20985
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
|| || || || || ||||||||
Sbjct 20986 AAGGTCTTGACGAAGATCTGCAT 21008
>seq13717
Length=68558
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || ||||| || || || || || || ||||| || |||| || | | | || ||
Sbjct 35026 ACCAAGTGAAGTGTTGACTCCTTCTGGATGTTGTAGTCAGCGAGTGTACGGCCGTCTTCA 35085
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| || || || || || || | ||| ||||| || || ||||||||||| || |||||
Sbjct 35086 AGCTGTTTTCCGGCGAAAATGAGACGTTGTTGGTCTGGTGGAATGCCTTCCTTGTCTTGG 35145
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || ||| ||| | || | ||||| || | ||| || || || || | ||| ||
Sbjct 35146 ATCTTGGTTTTCACATTGTCGATGGTGTCTGAGGATTCAACCTCTAGGGTTATCGTCTTC 35205
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| |||| ||||| || || ||||||||
Sbjct 35206 CCTGTTAGGGTTTTCACGAAGATCTGCAT 35234
>seq15753
Length=130878
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| || || ||||| ||||| ||||| ||||| || ||||| ||||| | || | |
Sbjct 123935 ACGCAACACCAAATGGAGGGTCGATTCCTTTTGAATGTTGTAGTCGGCCAACGTACGACC 123994
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
|| || | ||||| || ||||||||||| | |||||| || || || || || | ||
Sbjct 123995 GTCTTCGAGCTGCTTTCCAGCAAATATCAATCTCTGTTGGTCTGGAGGGATACCCCCCTT 124054
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|| |||||||| || || | || | ||||| || | ||||| || || ||||
Sbjct 124055 GTCCGGAATTTTTGTCTTGACGTTGTCAATGGTGTCCGAGCTCTCCACCTCTAGCGTGAT 124114
Query 101434 CGTTTTGCCGGTTAAAGT 101451
||| || || || |||||
Sbjct 124115 CGTCTTTCCTGTCAAAGT 124132
>seq15654
Length=163759
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || |||||||| ||||| || || || ||||| || || | ||| | |||| ||
Sbjct 112223 ACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCAGCCAAAGTACGACCATCCTCG 112164
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| || || || ||||| |||| | ||| || || || || ||||| || |||||||||
Sbjct 112163 AGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGA 112104
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || |||||| | || | || || | || || || || |||| || ||
Sbjct 112103 ATCTTAGTCTTTACATTATCGATGGTATCGCTGCTCTCGACCTCGAGGGTGATGGTCTTT 112044
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || ||||| ||||| || ||||||||
Sbjct 112043 CCCGTCAAAGTCTTTACGAAAATCTGCAT 112015
>seq15600
Length=115454
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| || || ||||||||||| || || || || | ||||| || || | || | |
Sbjct 103266 ACGCAAGACCAAATGAAGGGTGGACTCCTTCTGAACGTTGTAGTCAGCCAATGTACGACC 103207
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| || | || || |||||||| || | ||| || ||||| | || || ||||| ||
Sbjct 103206 ATCCTCGAGCTGTTTTCCTGCAAAGATTAGACGTTGCTGATCTGTGGGGATCCCTTCCTT 103147
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
||||| || || || ||| | || | ||||| || | || || || ||||| |
Sbjct 103146 CTCTTGGATCTTCGTCTTGACATTGTCGATTGTGTCGGAGCTCTCGACATCGAGAGTCAT 103087
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| ||||| |||| ||||| ||||| || |||||
Sbjct 103086 GGTCTTGCCAGTTAGGGTTTTGACAAAGATTTGCAT 103051
>seq13580
Length=39997
Score = 93.3 bits (102), Expect = 3e-14
Identities = 139/195 (71%), Gaps = 3/195 (2%)
Strand=Plus/Plus
Query 101276 GATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAAT-TGCTTACCTGC 101334
||||| ||||| || ||||| ||||| | || | | || || | ||||| || ||
Sbjct 2 GATTCCTTTTGAATGTTGTAGTCGGCCAATGTACGACCGTCCTCGAGGCTGCTTTCCAGC 61
Query 101335 AAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTAC 101394
||||||||| | |||||| || | ||||| || || || || ||||||||| || ||
Sbjct 62 AAATATCAATCTCTGTTGGTCTG--GGAATACCCTCCTTGTCCTGAATTTTTGTCTTGAC 119
Query 101395 AATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTT 101454
| || | ||||| || | ||||| || ||||| | ||| || || || ||||| ||
Sbjct 120 GTTGTCAATGGTGTCCGAGCTCTCCACCTCGAGAGTAATCGTCTTACCAGTCAAAGTCTT 179
Query 101455 TACAAATATCTGCAT 101469
|| || ||||||||
Sbjct 180 GACGAAAATCTGCAT 194
>seq37662
Length=1545
Score = 87.8 bits (96), Expect = 1e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| || || ||||||||||| || || || || | || || || || | || | |
Sbjct 267 ACGCAAGACCAAATGAAGGGTGGACTCCTTCTGAACGTTATAGTCAGCCAATGTACGACC 326
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| || | || || |||||||| || | ||| || ||||| | || || ||||| ||
Sbjct 327 ATCCTCGAGCTGTTTTCCTGCAAAGATTAGACGTTGCTGATCTGTGGGGATCCCTTCCTT 386
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
||||| || || || ||| | || | ||||| || | || || || ||||| |
Sbjct 387 CTCTTGGATCTTCGTCTTGACATTGTCGATTGTGTCGGAGCTCTCGACATCGAGAGTCAT 446
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| ||||| |||| ||||| ||||| || |||||
Sbjct 447 GGTCTTGCCAGTTAGGGTTTTGACAAAGATTTGCAT 482
>seq5777
Length=13417
Score = 82.4 bits (90), Expect = 6e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || ||||||||||| | |||||| || || || || || || || || |||||||||
Sbjct 13417 TTTCCAGCAAATATCAATCTCTGTTGGTCTGGGGGGATACCCTCCTTGTCCTGAATTTTT 13358
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | ||||| || | ||||| || || |||| ||| || || ||
Sbjct 13357 GTCTTGACGTTGTCAATGGTGTCCGAGCTCTCCACCTCCAGCGTGATCGTCTTTCCTGTC 13298
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
||||| || || || ||||||||
Sbjct 13297 AAAGTCTTCACGAAGATCTGCAT 13275
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396060641056416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |