Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19]
45,088 sequences; 567,661,845 total letters
Query= NC_019516.1
Length=161440
Score E
Sequences producing significant alignments: (Bits) Value
seq11475 535 4e-147
seq15224 302 5e-77
seq8938 163 3e-35
seq15824 158 1e-33
seq10333 145 8e-30
seq12771 143 3e-29
seq15982 122 9e-23
seq5553 118 1e-21
seq12877 104 2e-17
seq14024 96.9 4e-15
seq13902 87.8 2e-12
>seq11475
Length=22225
Score = 535 bits (592), Expect = 4e-147
Identities = 722/1001 (72%), Gaps = 6/1001 (1%)
Strand=Plus/Minus
Query 9815 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGA 9874
||||| || | ||||||||| | |||| || || |||||||| |||||||||||
Sbjct 12883 TTTGATATTATGGATGACTGGTTACGTAGAGACCGTTTCGTTTTTGTAGGTTGGTCTGGT 12824
Query 9875 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTT 9934
||| | || ||||| ||||||| | || | || || ||| |||| || || ||||||
Sbjct 12823 CTATTGCTCTTTCCTTGTGCTTATTTCGCTGTAGGGGGTTGGTTTACAGGTACGACGTTT 12764
Query 9935 GTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGG-TGCTAATTTCCT 9993
|| || ||||| ||||| || | || ||| || | || || ||| |||||| |
Sbjct 12763 GTAACTTCATGGTATACTCATGGGTTGGCCAGTTCATATTTGGAAGGCTGC-AATTTCTT 12705
Query 9994 TACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 10053
|| || || || || || |||||| || | | | || ||| | | | || |||||
Sbjct 12704 AACCGCAGCCGTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTGCTGTGGGG 12645
Query 10054 TCCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGT 10113
|||||| | || || ||||| || ||| || | || || || ||| |||||||
Sbjct 12644 TCCTGAAGCACAAGGCGATTTTACTCGTTGGTGTCAATTAGGCGGCCTGTGGACTTTTGT 12585
Query 10114 GGCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAG 10173
|| || || || || |||| |||| || |||||||||||||| || || || || |
Sbjct 12584 TGCTCTTCATGGTGCTTTCGGACTAATAGGTTTTATGTTACGCCAATTCGAACTTGCTCG 12525
Query 10174 ATTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGT 10233
|| || | | || ||||| ||||| || || || || || || ||||||||||||||
Sbjct 12524 ATCTGTTCAATTGCGCCCTTATAATGCAATAGCATTCTCGGGCCCAATTGCTGTTTTTGT 12465
Query 10234 CAGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGG 10293
||| ||||| || |||||||| || || ||| |||||||||||||||| ||||| ||
Sbjct 12464 TTCTGTATTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 12405
Query 10294 CGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAA 10353
|| || || ||||| || ||| | ||||| | || || ||||||||||||||||| ||
Sbjct 12404 TGTAGCAGCTATTTTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACGCTGAA 12345
Query 10354 TCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCA 10413
|| || ||||||||||||||||||||| || |||| | || || |||| || || ||
Sbjct 12344 CCCTTTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCCGCTCTGCTATGCGCTATTCA 12285
Query 10414 CGGAGTCACTGTAGAAAACACACTTTATC--AAGATGGCGAACAAGCAAACACTTTCAAA 10471
|| | || |||||||| || ||||| | ||||| || ||||| || |||
Sbjct 12284 TGGTGCTACCGTAGAAAATAC--TTTATTCGAGGATGGTGATGGGGCAAATACATTCCGG 12227
Query 10472 GCTTTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGG 10531
|||||| | ||||||| ||||| || ||||| ||||| || ||||||||||| |||
Sbjct 12226 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGTTTTTGG 12167
Query 10532 TCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTT 10591
||||| || ||||| |||||||| ||||||||| ||| | |||||||||||| | |||
Sbjct 12166 TCCCAAATTTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 12107
Query 10592 GTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTT 10651
||||| || | ||| | |||| | || |||| | | ||||| || | || ||
Sbjct 12106 GTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTCTGGCCTTGAACCTA 12047
Query 10652 CGTGCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACG 10711
||||| || || || || || ||||| || | || | ||||||||||||||||||||
Sbjct 12046 CGTGCCTATGACTTCGTTTCCCAAGAAATACGTGCAGCCGAAGATCCTGAATTTGAGACT 11987
Query 10712 TTCTATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGAC 10771
||||| || || ||||| || | || |||||| ||||||| |||||||| | ||
Sbjct 11986 TTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCTTGGATGGCGGCTCAAGAT 11927
Query 10772 CAACCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812
|| || || |||| | || | ||||| || || ||||| ||
Sbjct 11926 CAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 11886
>seq15224
Length=172684
Score = 302 bits (334), Expect = 5e-77
Identities = 310/405 (77%), Gaps = 0/405 (0%)
Strand=Plus/Plus
Query 8634 TGCATACTCTGCTCCTGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCA 8693
|||||| || ||||| ||||| || ||| |||| || ||| | ||||||| |||||||
Sbjct 89318 TGCATATTCAGCTCCGGTTGCAGCGGCTACTGCCGTTTTCTTGATCTATCCAATTGGTCA 89377
Query 8694 AGGTTCGTTCTCTGATGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGT 8753
||| || ||||||||||||||| | || || || ||||| ||||||| ||| ||||
Sbjct 89378 AGGAAGCTTTTCTGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAACTTCATGATTGT 89437
Query 8754 CTTCCAGGCTGAGCACAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGT 8813
||||||||||||||||||||||| |||||||| || |||||| | ||||| ||||||||
Sbjct 89438 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTGGGTGTAGCTGGTGT 89497
Query 8814 CTTCGGCGGATCTCTCTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCG 8873
|||||||| || || ||| || ||||||||||| | || |||||| || || |
Sbjct 89498 ATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATTAG 89557
Query 8874 TGAGACCACCGAAACCGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAAC 8933
|| ||||| |||| || ||| || | || |||| || |||||||| || |||||
Sbjct 89558 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAAC 89617
Query 8934 TTACAACATTGTTGCCGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTT 8993
||| || || || || ||||||| || |||||||| ||||||||||||||||| |||
Sbjct 89618 TTATAATATCGTAGCTGCTCATGTTTATTTTGGTCGATTGATCTTCCAATATGCTAGTTT 89677
Query 8994 TAACAATTCTAGAAGCTTGCATTTCTTCCTCGCTGCGTGGCCTGT 9038
|||||||| | || || |||||| | ||||| ||||| ||
Sbjct 89678 CAACAATTCCCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCGGT 89722
Score = 111 bits (122), Expect = 2e-19
Identities = 121/161 (75%), Gaps = 6/161 (4%)
Strand=Plus/Plus
Query 8905 GGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGCTACTTT 8964
|| |||| || |||||||| || |||||||| || || || || |||||||| || |||
Sbjct 89734 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTT 89793
Query 8965 GGTCGCTTGATCTTC------CAATATGCATCTTTTAACAATTCTAGAAGCTTGCATTTC 9018
||||| ||||||||| |||||||| ||| ||||||||| | || || |||
Sbjct 89794 GGTCGATTGATCTTCCAATATCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTC 89853
Query 9019 TTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGC 9059
||| | ||||| ||||| || || || || |||||||| ||
Sbjct 89854 TTCTTAGCTGCTTGGCCGGTAGTCGGTATTTGGTTTACTGC 89894
Score = 100 bits (110), Expect = 3e-16
Identities = 117/158 (74%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 8377 ATCGACGGCATCCGCGAACCAGTTGCTGGATCTCTCATGTACGGTAACAACATCATCTCT 8436
|| || || || || ||||| ||| | |||||||| | ||||| ||||| || || |||
Sbjct 89156 ATTGATGGGATTCGTGAACCTGTTTCGGGATCTCTACTTTACGGAAACAATATTATTTCT 89215
Query 8437 GGTGCAGTTGTTCCCAGCTCTAACGCAATTGGCCTCCACTTCTACCCCATCTGGGAAGCC 8496
||||| || |||| | ||| || || || | || || || || || ||||||||
Sbjct 89216 GGTGCCATTATTCCTACTTCTGCAGCTATAGGGTTGCATTTTTATCCAATATGGGAAGCA 89275
Query 8497 GCTTCTCTTGATGAGTGGCTCTACAACGGTGGTCCTTA 8534
|| ||| ||||||||||| | || || |||||||||||
Sbjct 89276 GCATCTGTTGATGAGTGGTTATATAATGGTGGTCCTTA 89313
>seq8938
Length=12132
Score = 163 bits (180), Expect = 3e-35
Identities = 230/322 (71%), Gaps = 2/322 (1%)
Strand=Plus/Minus
Query 10514 ACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTT 10573
|| ||||||||||| |||||||| | ||||| |||||||| ||||||| | ||| |
Sbjct 2038 ACCGCTAACCGTTTTTGGTCCCAACTTTTTGGGGTTGCTTTTTCCAATAAAAGTTGGTTA 1979
Query 10574 CATTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATT 10633
|||||||||||| | |||||||| || | | | | |||| | || |||| | |
Sbjct 1978 CATTTCTTTATGTTATTTGTACCAGTAACCGTTTTATGGATGAGTGCTCTTGGGGTAGTC 1919
Query 10634 GGTCTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAG--AGATCAGGGCGTCAG 10691
||||| || | || || ||||| || || || || || |||| | || | || | |
Sbjct 1918 GGTCTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCCCAAGAAATATACGTGCAGCCG 1859
Query 10692 AAGATCCTGAATTTGAGACGTTCTATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTG 10751
||||||||||||||||||| ||||| || || ||||| || | || |||||| ||||||
Sbjct 1858 AAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTG 1799
Query 10752 CATGGATGGCACCAGTTGACCAACCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTC 10811
| ||||||| | || || || || |||| | || | ||||| || || ||||| |
Sbjct 1798 CTTGGATGGTGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTAC 1739
Query 10812 CTAGAGGTAATGCACTGTGATA 10833
| | || || || || | |||
Sbjct 1738 CCCGTGGAAACGCTCTTTAATA 1717
>seq15824
Length=139560
Score = 158 bits (174), Expect = 1e-33
Identities = 168/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 10151 TTACGCCAGTTTGAGCTGGCGAGATTAATTGGAATCCGACCTTACAATGCTATCGCGTTT 10210
|||||||| || || || || ||| ||| | | || ||||| ||||| || || ||
Sbjct 61337 TTACGCCAATTCGAACTTGCTCGATCTATTTAATTGCGCCCTTATAATGCAATAGCATTC 61278
Query 10211 TCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGT 10270
|| || || |||||||||||||| ||| ||||| || |||||||| | || ||| ||
Sbjct 61277 TCGGGCCCAATTGCTGTTTTTGTTTCTGTATTCCTAATTTATCCACTAGATCAATCTGGT 61218
Query 10271 TGGTTCTTTGCGCCGAGTTTCGGCGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAG 10330
|||||||||||||| ||||| || || || || ||||| || ||| | || || | ||
Sbjct 61217 TGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATTTTTCGATTCATCCTATTTTTTCAA 61158
Query 10331 GGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGA 10372
|| |||||||||||||||| || | || ||||||||||||
Sbjct 61157 GGGTTTCATAATTGGACGCAGAACTCTTTTCATATGATGGGA 61116
>seq10333
Length=16991
Score = 145 bits (160), Expect = 8e-30
Identities = 178/241 (74%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 10375 TGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACTGTAGAAAACAC 10434
||||||| || |||| | || || |||| || || || || | || |||||||| ||
Sbjct 6646 TGCTGGTGTATTGGGCGCCGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATAC 6705
Query 10435 ACTTTATC--AAGATGGCGAACAAGCAAACACTTTCAAAGCTTTTGATAGCACTCAAGAA 10492
||||| | ||||| || ||||| || ||| |||||| | |||||||
Sbjct 6706 --TTTATTCGAGGATGGTGATGGGGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCT 6763
Query 10493 GAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCT 10552
||||| || ||||| ||||| || ||||||||||| |||||||| || ||||| |||||
Sbjct 6764 GAAGAAACTTATTCAATGGTCACCGCTAACCGTTTTTGGTCCCAAATTTTTGGGGTTGCT 6823
Query 10553 TTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGG 10612
||| ||||||||| ||| | |||||||||||| | |||||||| || | ||| | |||
Sbjct 6824 TTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACAGGTTTATGG 6883
Query 10613 A 10613
|
Sbjct 6884 A 6884
>seq12771
Length=31889
Score = 143 bits (158), Expect = 3e-29
Identities = 176/240 (73%), Gaps = 4/240 (2%)
Strand=Plus/Minus
Query 10137 TAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGATTAATTGGAATCCGACCTTACA 10196
|||| || |||||||||||||| || || || || ||| || | | || ||||| |
Sbjct 8608 TAATAGGTTTTATGTTACGCCAATTCGAACTTGCTCGATCTGTTCAATTGCGCCCTTATA 8549
Query 10197 ATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTCATCTATCCAC 10256
|||| || || || || || | |||| ||||||||| ||| ||||| || |||||||
Sbjct 8548 ATGCAATAGCATTCTCGGGCCAAATTGTTGTTTTTGTTTCTGTATTCCTAATTTATCCAC 8489
Query 10257 TCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGG----CGTCGCGGCGATTTTCCGC 10312
| | || ||| |||||||||||||||| ||||| || || || | ||||| ||
Sbjct 8488 TAGATCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTATGTAGCAACTATTTTTCGA 8429
Query 10313 TTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGA 10372
| | | ||||| | | || ||||||||||||||| | || || || ||||||||||||
Sbjct 8428 TCCATCCTCTTTTTTCGAGGGTTTCATAATTGGACGTTGAACCCTTTTCATATGATGGGA 8369
>seq15982
Length=164312
Score = 122 bits (134), Expect = 9e-23
Identities = 297/447 (66%), Gaps = 11/447 (2%)
Strand=Plus/Plus
Query 9851 TTTGTTTTTGTGGGTTGGTCTGGACTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGT 9910
||| ||||||| || |||||| | ||| | |||||||| || | || | || | ||
Sbjct 19966 TTTTTTTTTGTAGGGTGGTCTAGTCTATTGCTTTTTCCT--TGTTCATTTCGCCGTAGGG 20023
Query 9911 GGCTGGCTTACTGGCACTACGTTTGTCACGAGTTGGTACACTCAC----GGACTTGCAAG 9966
|| ||| ||| ||| || |||||||| || ||||| ||||| || | || |
Sbjct 20024 GGTTGGTTTATTGGTACGACGTTTGTAACTTCATGGTATACTCAATCATGGGTTGGCCCG 20083
Query 9967 TAGTTACCTTGAGGGTGCTAATTTCCTTACAGCGGCTGTCTCAACGCCTGCTGATGCTAT 10026
| || | || ||| |||||| | || || || || || || | |||| | | |
Sbjct 20084 TTCATATTTGGAAGGTTGCAATTTCTTAACCGCAGCCGTTTCTACTCATGCTAACAGTTT 20143
Query 10027 GGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGAGATTTCGTCCGCTGGAT 10086
| || ||| || | || ||||| ||| | || || | ||| || |||
Sbjct 20144 AGCACACTCT----TTGTTGTTGTGGGTCTTGAAGCACAAGGCGGTTTTACTCGTTGGTG 20199
Query 10087 CCAGCTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGAGCCTTCGCTTTAATCGGCTT 10146
|| || |||| || ||| ||||||| | || || || || || | |||| || ||
Sbjct 20200 TCAA-TTAGGGGCCTGTGGACTTTTGTTACTCTTCATGGTGCTTTTGGACTAATAGGTTT 20258
Query 10147 TATGTTACGCCAGTTTGAGCTGGCGAGATTAATTGGAATCCGACCTTACAATGCTATCGC 10206
|||||||||||| || || | ||| ||| || | | | |||| | ||| || ||
Sbjct 20259 TATGTTACGCCAATTCGAACATGCGCGATCTGTTCAATTGTGCTCTTATAGTGCAATTGC 20318
Query 10207 GTTTTCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTCATCTATCCACTCGGACAGTC 10266
|| || || || |||| ||||| || ||| ||||| || |||||||| || || ||
Sbjct 20319 ATTCTCAGGCCCAATTGTCGTTTTGGTTTATGTATTCCTAATTTATCCACTAGGTCAATC 20378
Query 10267 TAGTTGGTTCTTTGCGCCGAGTTTCGG 10293
||||||||| |||||||| ||||| ||
Sbjct 20379 TAGTTGGTTTTTTGCGCCTAGTTTTGG 20405
>seq5553
Length=10595
Score = 118 bits (130), Expect = 1e-21
Identities = 296/447 (66%), Gaps = 11/447 (2%)
Strand=Plus/Plus
Query 9851 TTTGTTTTTGTGGGTTGGTCTGGACTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGT 9910
||| ||||| | || |||||| | ||| | |||||||| || | || | || | ||
Sbjct 5476 TTTTTTTTTTTAGGGTGGTCTAGTCTATTGCTTTTTCCT--TGTTCATTTCGCCGTAGGG 5533
Query 9911 GGCTGGCTTACTGGCACTACGTTTGTCACGAGTTGGTACACTCAC----GGACTTGCAAG 9966
|| ||| ||| ||| || |||||||| || ||||| ||||| || | || |
Sbjct 5534 GGTTGGTTTATTGGTACGACGTTTGTAACTTCATGGTATACTCAATCATGGGTTGGCCCG 5593
Query 9967 TAGTTACCTTGAGGGTGCTAATTTCCTTACAGCGGCTGTCTCAACGCCTGCTGATGCTAT 10026
| || | || ||| |||||| | || || || || || || | |||| | | |
Sbjct 5594 TTCATATTTGGAAGGTTGCAATTTCTTAACCGCAGCCGTTTCTACTCATGCTAACAGTTT 5653
Query 10027 GGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGAGATTTCGTCCGCTGGAT 10086
| || ||| || | || ||||| ||| | || || | ||| || |||
Sbjct 5654 AGCACACTCT----TTGTTGTTGTGGGTCTTGAAGCACAAGGCGGTTTTACTCGTTGGTG 5709
Query 10087 CCAGCTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGAGCCTTCGCTTTAATCGGCTT 10146
|| || |||| || ||| ||||||| | || || || || || | |||| || ||
Sbjct 5710 TCAA-TTAGGGGCCTGTGGACTTTTGTTACTCTTCATGGTGCTTTTGGACTAATAGGTTT 5768
Query 10147 TATGTTACGCCAGTTTGAGCTGGCGAGATTAATTGGAATCCGACCTTACAATGCTATCGC 10206
|||||||||||| || || | ||| ||| || | | | |||| | ||| || ||
Sbjct 5769 TATGTTACGCCAATTCGAACATGCGCGATCTGTTCAATTGTGCTCTTATAGTGCAATTGC 5828
Query 10207 GTTTTCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTCATCTATCCACTCGGACAGTC 10266
|| || || || |||| ||||| || ||| ||||| || |||||||| || || ||
Sbjct 5829 ATTCTCAGGCCCAATTGTCGTTTTGGTTTATGTATTCCTAATTTATCCACTAGGTCAATC 5888
Query 10267 TAGTTGGTTCTTTGCGCCGAGTTTCGG 10293
||||||||| |||||||| ||||| ||
Sbjct 5889 TAGTTGGTTTTTTGCGCCTAGTTTTGG 5915
>seq12877
Length=40778
Score = 104 bits (114), Expect = 2e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 10649 CTTCGTGCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAG 10708
||| |||| || || || || || ||||| || | || | ||||||||||||||||||
Sbjct 746 CTTAGTGCCTATGACTTCGTTTCCCAAGAAATACGTGCAGCCGAAGATCCTGAATTTGAG 805
Query 10709 ACGTTCTATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTT 10768
|| ||||| || || ||||| || | || |||||| ||||||| |||||||| |
Sbjct 806 ACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCTTGGATGGCGGCTCAA 865
Query 10769 GACCAACCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCCTAGAGGTAATGCACTG 10828
|| || || || |||| | || | ||||| || || ||||| || | || || || ||
Sbjct 866 GATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTT 925
Query 10829 TGATA 10833
| |||
Sbjct 926 TAATA 930
>seq14024
Length=49420
Score = 96.9 bits (106), Expect = 4e-15
Identities = 237/354 (67%), Gaps = 9/354 (3%)
Strand=Plus/Plus
Query 9815 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGA 9874
||||| || | ||||||||| | |||||| || |||||||| |||| ||| ||
Sbjct 34637 TTTGATATTATGGATGACTGGTTACGTAGAGATCATTTCGTTTTTGTAGGTTAGTCGGGT 34696
Query 9875 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACT-----GGCACTA 9929
||| | || ||||| ||||||| |||| | || || ||| ||| | || || |
Sbjct 34697 CTATTGCTCTTTCCTTGTGCTTATTTTGCTGTAGGGGGTTGGTTTAATTTACAGGTACGA 34756
Query 9930 CGTTTGTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGG-TGCTAAT 9988
||||||| || ||||| ||||| || | || ||| || | || || ||| |||
Sbjct 34757 CGTTTGTAACTTCATGGTATACTCATGGGATGGCCAGTTCATATTTGGAAGGCTGC-AAT 34815
Query 9989 TTCCTTACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTT 10048
||| | || || | || || |||||| || | | | || ||| || || | ||
Sbjct 34816 TTCTTAACCGCAATCGATTCTACTCCTGCTAATAGTTTAGCACACTCT-TTGTTGTTGTT 34874
Query 10049 -TGGGGTCCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGC 10107
||||||||||| | || || ||||| || ||| || | || || | ||| |
Sbjct 34875 GTGGGGTCCTGAAGCACAAGGCGATTTTACTCGTTGGCGTCAATTAGGCGGCCAGTGGAC 34934
Query 10108 TTTTGTGGCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTT 10161
|||||| || || || || || |||| |||| || ||||||||||||| ||
Sbjct 34935 TTTTGTTGCTCTTCATGGTGCTTTCGGACTAATAGGTCTTATGTTACGCCAATT 34988
>seq13902
Length=44788
Score = 87.8 bits (96), Expect = 2e-12
Identities = 242/364 (66%), Gaps = 14/364 (4%)
Strand=Plus/Minus
Query 9872 GGACTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACG 9931
|| ||| | || ||||| ||||||| | || | || || ||| |||| | || |||
Sbjct 6444 GGTCTATTGCTCTTTCCTTGTGCTTAT-TCGCTGTAGGGGGTTGGTTTACAAGTACGACG 6386
Query 9932 TTTGTCACGAGTTGGTACACTCACGG-------ACTTG-CAAGTAGTTACCTTGA--GGG 9981
||||| || ||||| ||||| || ||||| | ||| || |||| ||
Sbjct 6385 TTTGTAACCTCATGGTATACTCATGGGTTGGCCACTTGGCCAGTTCATAT-TTGAAAGGC 6327
Query 9982 TGCTAATTTCCTTACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCT 10041
|| ||||||| | || || ||||| || || |||||| || | | | || ||| || |
Sbjct 6326 TG-TAATTTCTTAACCGCAGCTGTTTCCACTCCTGCTAATAGTTTAGCACACTCTTTTGT 6268
Query 10042 TCTA-CTTTGGGGTCCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGAC 10100
| | || ||| ||||||| | || || ||||| || ||| || | || || |
Sbjct 6267 TGTTTCTGTGGAGTCCTGAAGCACAAGGCGATTTTACTCGTTGGTGTCAATTAGGCGGCC 6208
Query 10101 TCTGGGCTTTTGTGGCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGT 10160
||| ||||||| | || || || || ||| |||| || |||||||||||||| |
Sbjct 6207 CGTGGACTTTTGTTGATCTTCATGGTGCTTTCAGACTAATAGGTTTTATGTTACGCCAAT 6148
Query 10161 TTGAGCTGGCGAGATTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTA 10220
| || || || ||| || | | || ||||| ||||| || || || || || || |
Sbjct 6147 TCGAACTTGCTCGATCTGTTCAATTGCGCCCTTATAATGCAATAGCATTCTCGGGCCCAA 6088
Query 10221 TTGC 10224
||||
Sbjct 6087 TTGC 6084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 516188911872000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |