Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19]
45,088 sequences; 567,661,845 total letters
Query= NC_020486.1
Length=171211
Score E
Sequences producing significant alignments: (Bits) Value
seq11475 531 6e-146
seq15224 279 6e-70
seq8938 156 5e-33
seq15982 136 4e-27
seq14024 134 2e-26
seq5553 132 5e-26
seq13902 125 8e-24
seq10333 125 8e-24
seq45009 96.9 4e-15
>seq11475
Length=22225
Score = 531 bits (588), Expect = 6e-146
Identities = 731/1016 (72%), Gaps = 6/1016 (1%)
Strand=Plus/Minus
Query 162117 TTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGA 162176
|||||| | | || |||||| | |||||||||||||||||||| || ||||||||
Sbjct 12883 TTTGATATTATGGATGACTGGTTACGTAGAGACCGTTTCGTTTTTGTAGGTTGGTCTGGT 12824
Query 162177 CTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTC 162236
|| | || ||||| ||||||| | ||| | ||||||||| |||| || || || ||
Sbjct 12823 CTATTGCTCTTTCCTTGTGCTTATTTCGCTGTAGGGGGTTGGTTTACAGGTACGACGTTT 12764
Query 162237 GTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGG-TGCAAACTTTCT 162295
|| || ||||||||||| || | || ||||| ||| | || || ||||| |||||
Sbjct 12763 GTAACTTCATGGTATACTCATGGGTTGGCCAGTTCATATTTGGAAGGCTGCAA--TTTCT 12706
Query 162296 TA-CTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGG 162354
|| | || || ||||||||||| || | | | | || ||| | || | || ||||
Sbjct 12705 TAACCGCAGCCGTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTGCTGTGGG 12646
Query 162355 GTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTG 162414
||||||| | ||||| || || | || ||||| ||| | || || || ||||||||||
Sbjct 12645 GTCCTGAAGCACAAGGCGATTTTACTCGTTGGTGTCAATTAGGCGGCCTGTGGACTTTTG 12586
Query 162415 TGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCAC 162474
| || || || || || || | ||| |||||||| ||| | ||||| || ||||| || |
Sbjct 12585 TTGCTCTTCATGGTGCTTTCGGACTAATAGGTTTTATGTTACGCCAATTCGAACTTGCTC 12526
Query 162475 GA-CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTC 162533
|| || || | | || ||||| ||||| || || ||||| || || |||||||| ||
Sbjct 12525 GATCTGTTCAAT-TGCGCCCTTATAATGCAATAGCATTCTCGGGCCCAATTGCTGTTTTT 12467
Query 162534 GTTAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTC 162593
||| ||| || || || ||||| | || ||||| |||||||| || || ||
Sbjct 12466 GTTTCTGTATTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTT 12407
Query 162594 GGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTA 162653
|| || ||||| || || |||||| | ||||| | |||||||| ||||| ||||||||
Sbjct 12406 GGTGTAGCAGCTATTTTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACGCTG 12347
Query 162654 AATCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATT 162713
|| |||||||| |||||||| || || ||| | | || | || |||| | ||||||
Sbjct 12346 AACCCTTTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCCGCTCTGCTATGCGCTATT 12287
Query 162714 CATGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAA 162773
||||| | || || |||||||| | | ||| ||||| || ||||| || ||
Sbjct 12286 CATGGTGCTACCGTAGAAAATACTTTATTCGAGGATGGTGATGGGGCAAATACATTCCGG 12227
Query 162774 GCATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGG 162833
|| ||| || | || || | |||||||| ||||| ||||| || || ||||| || |||
Sbjct 12226 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGTTTTTGG 12167
Query 162834 TCACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTT 162893
|| || ||||| || |||||||| || || |||||||| |||||||||||| | |||
Sbjct 12166 TCCCAAATTTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 12107
Query 162894 GTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTT 162953
|| || || | ||| | |||| ||| || | || | | || || || | || ||
Sbjct 12106 GTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTCTGGCCTTGAACCTA 12047
Query 162954 CGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACG 163013
||||| || ||||| || || |||||| | ||||| || ||||| ||||| ||||||||
Sbjct 12046 CGTGCCTATGACTTCGTTTCCCAAGAAATACGTGCAGCCGAAGATCCTGAATTTGAGACT 11987
Query 163014 TTCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGAC 163073
||||| || || || ||||| | |||||||| |||| || ||| | || | ||
Sbjct 11986 TTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCTTGGATGGCGGCTCAAGAT 11927
Query 163074 CAACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129
|| |||||||| ||| || | |||||||| ||||| | || | || ||||||||
Sbjct 11926 CAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 11871
>seq15224
Length=172684
Score = 279 bits (308), Expect = 6e-70
Identities = 304/404 (75%), Gaps = 0/404 (0%)
Strand=Plus/Plus
Query 161263 GCATACTCTGCTCCTGTCGCTGCAGCGAGTGCAGTGTTCCTGGTCTATCCTTTCGGTCAA 161322
||||| || ||||| || || || || | ||| || ||| || ||||||| | ||||||
Sbjct 89319 GCATATTCAGCTCCGGTTGCAGCGGCTACTGCCGTTTTCTTGATCTATCCAATTGGTCAA 89378
Query 161323 GGTTCTTTCTCTGATGCAATGCCTCTGGGCATCTCTGGTACGTTCAACTACATGCTTGTC 161382
|| || ||||||| |||||| | || || |||||||| ||||||| |||| ||||
Sbjct 89379 GGAAGCTTTTCTGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAACTTCATGATTGTA 89438
Query 161383 TTCCAAGCAGAGCACAACATTCTCATGCACCCCTTCCATATGCTCGGCGTAGCAGGTGTG 161442
||||| || ||||||||||| || |||||||| || || ||| | || ||||| |||||
Sbjct 89439 TTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTGGGTGTAGCTGGTGTA 89498
Query 161443 TTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTACCTCTTCGCTGGTTCGT 161502
|| ||||| || || || ||||| ||||| ||||| |||| || ||| || || |
Sbjct 89499 TTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATTAGG 89558
Query 161503 GAAACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 161562
|||||||| ||||| || || || | ||||||| || |||||||| ||||| ||
Sbjct 89559 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACT 89618
Query 161563 TACAACATCGTTGCTGCCCACGGGTACTTCGGTCGTCTGATTTTCCAATACGCTTCCTTC 161622
|| || ||||| ||||| || | || || ||||| |||| |||||||| ||| |||
Sbjct 89619 TATAATATCGTAGCTGCTCATGTTTATTTTGGTCGATTGATCTTCCAATATGCTAGTTTC 89678
Query 161623 AACAACTCCCGCTCGCTGCACTTCTTCCTTGCTGCTTGGCCTGT 161666
||||| ||||| || | ||||||||| | ||||||||||| ||
Sbjct 89679 AACAATTCCCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCGGT 89722
Score = 113 bits (124), Expect = 5e-20
Identities = 134/182 (74%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 161533 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTC 161592
||||||| || |||||||| ||||| || || || ||||| ||||| || || || ||
Sbjct 89734 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTT 89793
Query 161593 GGTCGTCTGATTTTCCAATAC------GCTTCCTTCAACAACTCCCGCTCGCTGCACTTC 161646
||||| |||| |||||||| ||| |||||||| || || || | ||||||
Sbjct 89794 GGTCGATTGATCTTCCAATATCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTC 89853
Query 161647 TTCCTTGCTGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATG 161706
||| | ||||||||||| || || || || ||||| ||||| | || | ||||| |||
Sbjct 89854 TTCTTAGCTGCTTGGCCGGTAGTCGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATG 89913
Query 161707 GC 161708
||
Sbjct 89914 GC 89915
Score = 98.7 bits (108), Expect = 1e-15
Identities = 116/157 (74%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 161005 ATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAACATCATCTCT 161064
|| || || ||||||||||| || | || || || | || |||||||| || || |||
Sbjct 89156 ATTGATGGGATTCGTGAACCTGTTTCGGGATCTCTACTTTACGGAAACAATATTATTTCT 89215
Query 161065 GGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCATCTGGGAAGCA 161124
||||| |||| ||| ||||| ||||| || |||| || || || || |||||||||
Sbjct 89216 GGTGCCATTATTCCTACTTCTGCAGCTATAGGGTTGCATTTTTATCCAATATGGGAAGCA 89275
Query 161125 GCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTT 161161
||| | | || || ||| | || || ||||||||||
Sbjct 89276 GCATCTGTTGATGAGTGGTTATATAATGGTGGTCCTT 89312
Score = 96.9 bits (106), Expect = 4e-15
Identities = 156/222 (70%), Gaps = 13/222 (6%)
Strand=Plus/Plus
Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGT----TGGTT-------GGT 160924
|| ||||||||| | || ||||| || ||||||||||| | ||||| |||
Sbjct 88921 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATCGGATGGTTTGGAGATGGT 88980
Query 160925 TCGGCGTCCTGATGATTCCCTGCTTGCTCGCTGCTACCATTTGT-TTCATCATTGCCTTC 160983
| || || |||||||||| || | |||| || | ||| || || || ||||||
Sbjct 88981 TTGGTGTTTTGATGATTCCTACATTATTGACTGCAACT-TCTGTATTTATTATAGCCTTC 89039
Query 160984 GTTGGTGCTCCCCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATG 161043
||| |||||| || || | || || || ||||||||||| || | || || || |
Sbjct 89040 ATTGCTGCTCCGCCAGTCAATATTGATGGGATTCGTGAACCTGTTTCGGGATCTCTACTT 89099
Query 161044 TATGGAAACAACATCATCTCTGGTGCTGTTATCCCTTCTTCT 161085
|| |||||||| || || |||||||| |||| ||| |||||
Sbjct 89100 TACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCT 89141
>seq8938
Length=12132
Score = 156 bits (172), Expect = 5e-33
Identities = 230/325 (71%), Gaps = 2/325 (1%)
Strand=Plus/Minus
Query 162816 ACTGCGAACCGCTTCTGGTCACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTG 162875
|| || ||||| || ||||| || |||| || |||||||| || || |||||||
Sbjct 2038 ACCGCTAACCGTTTTTGGTCCCAACTTTTTGGGGTTGCTTTTTCCAATAAAAGTTGGTTA 1979
Query 162876 CATTTCTTTATGCTCTTTGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATT 162935
|||||||||||| | ||||| || || | | | | |||| ||| || | || | |
Sbjct 1978 CATTTCTTTATGTTATTTGTACCAGTAACCGTTTTATGGATGAGTGCTCTTGGGGTAGTC 1919
Query 162936 GGACTCGCTCTCAATCTTCGTGCTTACGACTTTGTATCTCAAGAA--GTTCGTGCGGCAG 162993
|| || || | || || ||||| || ||||| || || |||||| | ||||| || |
Sbjct 1918 GGTCTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCCCAAGAAATATACGTGCAGCCG 1859
Query 162994 AAGACCCTGAGTTTGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAG 163053
|||| ||||| |||||||| ||||| || || || ||||| | |||||||| |||| |
Sbjct 1858 AAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTG 1799
Query 163054 CATGGTTAGCACCAGTGGACCAACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGC 163113
| ||| | | | || || |||||||| ||| || | |||||||| ||||| | |
Sbjct 1798 CTTGGATGGTGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTAC 1739
Query 163114 CAAGAGGCAACGCTCTATGATATAA 163138
| | || |||||||| | ||| ||
Sbjct 1738 CCCGTGGAAACGCTCTTTAATAGAA 1714
>seq15982
Length=164312
Score = 136 bits (150), Expect = 4e-27
Identities = 299/437 (68%), Gaps = 17/437 (4%)
Strand=Plus/Plus
Query 162157 TTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTT 162216
||||||| || |||||| | || | |||||||| || | || | || | |||||||
Sbjct 19970 TTTTTGTAGGGTGGTCTAGTCTATTGCTTTTTCCT--TGTTCATTTCGCCGTAGGGGGTT 20027
Query 162217 GGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCAC----GGACTTGCGAGTTCC 162272
|| ||| ||| || || || || || ||||||||||| || | || ||||
Sbjct 20028 GGTTTATTGGTACGACGTTTGTAACTTCATGGTATACTCAATCATGGGTTGGCCCGTTCA 20087
Query 162273 TATCTTGAGGGT-GCAAACTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGACGCTATGG 162330
||| | || ||| |||| ||||||| | || || |||||||||| || || | | |
Sbjct 20088 TATTTGGAAGGTTGCAA--TTTCTTAACCGCAGCCGTTTCTACTCATGCTAACAGTTTAG 20145
Query 162331 GTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCC 162390
|| ||| | || || | ||||| ||| | ||||| | || | || ||||| |
Sbjct 20146 CACACTCTTTGTTG-TTGT---GGGTCTTGAAGCACAAGGCGGTTTTACTCGTTGGTGTC 20201
Query 162391 AACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCA 162450
|| || |||| || ||||||||||| | || || || || |||| ||| |||||||| |
Sbjct 20202 AA-TTAGGGGCCTGTGGACTTTTGTTACTCTTCATGGTGCTTTTGGACTAATAGGTTTTA 20260
Query 162451 TGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTTACAATGCTATTGCT 162509
|| | ||||| || |||| || ||| || || | | | |||| | ||| |||||
Sbjct 20261 TGTTACGCCAATTCGAACATGCGCGATCTGTTCAAT-TGTGCTCTTATAGTGCAATTGCA 20319
Query 162510 TTCTCAGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATCTATCCTTTGGGACAATCG 162569
|||||||| || |||| || || ||| ||| || || || ||||| | || |||||
Sbjct 20320 TTCTCAGGCCCAATTGTCGTTTTGGTTTATGTATTCCTAATTTATCCACTAGGTCAATCT 20379
Query 162570 TCCTGGTTCTTCGCACC 162586
||||| || || ||
Sbjct 20380 AGTTGGTTTTTTGCGCC 20396
>seq14024
Length=49420
Score = 134 bits (148), Expect = 2e-26
Identities = 252/367 (69%), Gaps = 9/367 (2%)
Strand=Plus/Plus
Query 162117 TTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGA 162176
|||||| | | || |||||| | ||||| | |||||||||||| || | ||| ||
Sbjct 34637 TTTGATATTATGGATGACTGGTTACGTAGAGATCATTTCGTTTTTGTAGGTTAGTCGGGT 34696
Query 162177 CTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACT-----GGGACTA 162231
|| | || ||||| ||||||| ||||| | ||||||||| ||| | || || |
Sbjct 34697 CTATTGCTCTTTCCTTGTGCTTATTTTGCTGTAGGGGGTTGGTTTAATTTACAGGTACGA 34756
Query 162232 CTTTCGTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGG-TGCAAAC 162290
| || || || ||||||||||| || | || ||||| ||| | || || |||||
Sbjct 34757 CGTTTGTAACTTCATGGTATACTCATGGGATGGCCAGTTCATATTTGGAAGGCTGCAA-- 34814
Query 162291 TTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCT 162349
||||||| | || | ||||||||| || | | | | || ||| | || | |
Sbjct 34815 TTTCTTAACCGCAATCGATTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTGTT 34874
Query 162350 ATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGAC 162409
||||||||||| | ||||| || || | || ||| | ||| | || || | |||||
Sbjct 34875 GTGGGGTCCTGAAGCACAAGGCGATTTTACTCGTTGGCGTCAATTAGGCGGCCAGTGGAC 34934
Query 162410 TTTTGTGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACT 162469
|||||| || || || || || || | ||| |||||| | ||| | ||||| || ||||
Sbjct 34935 TTTTGTTGCTCTTCATGGTGCTTTCGGACTAATAGGTCTTATGTTACGCCAATTCAAACT 34994
Query 162470 GGCACGA 162476
|| |||
Sbjct 34995 TGCTCGA 35001
>seq5553
Length=10595
Score = 132 bits (146), Expect = 5e-26
Identities = 298/437 (68%), Gaps = 17/437 (4%)
Strand=Plus/Plus
Query 162157 TTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTT 162216
||||| | || |||||| | || | |||||||| || | || | || | |||||||
Sbjct 5480 TTTTTTTAGGGTGGTCTAGTCTATTGCTTTTTCCT--TGTTCATTTCGCCGTAGGGGGTT 5537
Query 162217 GGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCAC----GGACTTGCGAGTTCC 162272
|| ||| ||| || || || || || ||||||||||| || | || ||||
Sbjct 5538 GGTTTATTGGTACGACGTTTGTAACTTCATGGTATACTCAATCATGGGTTGGCCCGTTCA 5597
Query 162273 TATCTTGAGGGT-GCAAACTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGACGCTATGG 162330
||| | || ||| |||| ||||||| | || || |||||||||| || || | | |
Sbjct 5598 TATTTGGAAGGTTGCAA--TTTCTTAACCGCAGCCGTTTCTACTCATGCTAACAGTTTAG 5655
Query 162331 GTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCC 162390
|| ||| | || || | ||||| ||| | ||||| | || | || ||||| |
Sbjct 5656 CACACTCTTTGTTG-TTGT---GGGTCTTGAAGCACAAGGCGGTTTTACTCGTTGGTGTC 5711
Query 162391 AACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCA 162450
|| || |||| || ||||||||||| | || || || || |||| ||| |||||||| |
Sbjct 5712 AA-TTAGGGGCCTGTGGACTTTTGTTACTCTTCATGGTGCTTTTGGACTAATAGGTTTTA 5770
Query 162451 TGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTTACAATGCTATTGCT 162509
|| | ||||| || |||| || ||| || || | | | |||| | ||| |||||
Sbjct 5771 TGTTACGCCAATTCGAACATGCGCGATCTGTTCAAT-TGTGCTCTTATAGTGCAATTGCA 5829
Query 162510 TTCTCAGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATCTATCCTTTGGGACAATCG 162569
|||||||| || |||| || || ||| ||| || || || ||||| | || |||||
Sbjct 5830 TTCTCAGGCCCAATTGTCGTTTTGGTTTATGTATTCCTAATTTATCCACTAGGTCAATCT 5889
Query 162570 TCCTGGTTCTTCGCACC 162586
||||| || || ||
Sbjct 5890 AGTTGGTTTTTTGCGCC 5906
>seq13902
Length=44788
Score = 125 bits (138), Expect = 8e-24
Identities = 265/383 (69%), Gaps = 22/383 (6%)
Strand=Plus/Minus
Query 162183 CTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACG 162242
|| ||||| ||||||| | ||| | ||||||||| |||| | || || || || ||
Sbjct 6435 CTCTTTCCTTGTGCTTAT-TCGCTGTAGGGGGTTGGTTTACAAGTACGACGTTTGTAACC 6377
Query 162243 AGTTGGTATACTCACGG-------ACTTG-CGAGTTCCTATCTTGA--GGGTGCAAACTT 162292
||||||||||| || ||||| | ||||| ||| |||| || || || ||
Sbjct 6376 TCATGGTATACTCATGGGTTGGCCACTTGGCCAGTTCATAT-TTGAAAGGCTGTAA--TT 6320
Query 162293 TCTTA-CTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCT-GCTTCTA 162350
||||| | || || ||||| ||||| || | | | | || ||| || | | ||||
Sbjct 6319 TCTTAACCGCAGCTGTTTCCACTCCTGCTAATAGTTTAGCACACTCTTTTGTTGTTTCTG 6260
Query 162351 TGGGGTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACT 162410
||| ||||||| | ||||| || || | || ||||| ||| | || || | ||||||
Sbjct 6259 TGGAGTCCTGAAGCACAAGGCGATTTTACTCGTTGGTGTCAATTAGGCGGCCCGTGGACT 6200
Query 162411 TTTGTGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTG 162470
||||| | || || || || || ||| |||||||| ||| | ||||| || |||||
Sbjct 6199 TTTGTTGATCTTCATGGTGCTTTCAGACTAATAGGTTTTATGTTACGCCAATTCGAACTT 6140
Query 162471 GCACGA-CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTG---C 162526
|| ||| || || | | || ||||| ||||| || || ||||| || || |||| |
Sbjct 6139 GCTCGATCTGTTCAAT-TGCGCCCTTATAATGCAATAGCATTCTCGGGCCCAATTGCAAC 6081
Query 162527 TGTATTCGTTAGTGTTTTTCTTA 162549
| |||| | || |||||| |||
Sbjct 6080 TTTATTTTTGAG-GTTTTTATTA 6059
>seq10333
Length=16991
Score = 125 bits (138), Expect = 8e-24
Identities = 162/224 (72%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 162700 TGCTCTCTGCTATTCATGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAG 162759
|||| | ||||||||||| | || || |||||||| | | ||| ||||| || |
Sbjct 6669 TGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTATTCGAGGATGGTGATGGGG 6728
Query 162760 CAAACACTTTTAAAGCATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTG 162819
|||| || || || ||| || | || || | |||||||| ||||| ||||| || |
Sbjct 6729 CAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCG 6788
Query 162820 CGAACCGCTTCTGGTCACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATT 162879
| ||||| || ||||| || ||||| || |||||||| || || |||||||| ||||
Sbjct 6789 CTAACCGTTTTTGGTCCCAAATTTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATT 6848
Query 162880 TCTTTATGCTCTTTGTTCCCGTCATGGGTCTCTGGACAAGTTCT 162923
|||||||| | ||||| || || | ||| | |||| ||| ||
Sbjct 6849 TCTTTATGTTATTTGTACCAGTAACAGGTTTATGGATGAGTGCT 6892
>seq45009
Length=33691
Score = 96.9 bits (106), Expect = 4e-15
Identities = 145/202 (72%), Gaps = 6/202 (3%)
Strand=Plus/Minus
Query 162352 GGGGTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTT 162411
|| ||||||| | ||||| || || | || ||||| ||| | || || | |||||||
Sbjct 13923 GGNGTCCTGAAGCACAAGGCGATTTTACTCGTTGGTGTCAATTAGGCGGCCCGTGGACTT 13864
Query 162412 TTGTGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGG 162471
|||| || || || || || || | ||| |||||||| ||| | ||||| || ||||| |
Sbjct 13863 TTGTTGCTCTTCATGGTGCTTTCGGACTAATAGGTTTTATGTTACGCCAATTCGAACTTG 13804
Query 162472 CACGA-CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTG---CT 162527
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Sbjct 13803 CTCGATCTGTTCAAT-TGCGCCCTTATAATGCAATAGCATTCTCGGGCCCAATTGCAACT 13745
Query 162528 GTATTCGTTAGTGTTTTTCTTA 162549
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Sbjct 13744 TTATTTTTGAG-GTTTTTATTA 13724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547438489678080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |