Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19]
45,088 sequences; 567,661,845 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq11475 480 1e-130
seq15224 269 4e-67
seq15824 149 8e-31
seq15982 138 2e-27
seq10333 136 5e-27
seq12771 134 2e-26
seq5553 134 2e-26
seq8938 125 1e-23
seq14024 113 6e-20
seq13902 109 7e-19
seq45009 91.5 2e-13
>seq11475
Length=22225
Score = 480 bits (532), Expect = 1e-130
Identities = 723/1021 (71%), Gaps = 6/1021 (1%)
Strand=Plus/Plus
Query 23386 ATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCAATTACAGGAAAGTTTTCGTGTGGTT 23445
|| ||||||| || || | || || | |||||| | || |||||| || || |
Sbjct 11866 ATTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 11925
Query 23446 GGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGA 23505
| || || | |||||| |||| | || | || || | ||||||||| |||||||
Sbjct 11926 GATCTTGAGCCGCCATCCAAGCACGAATACCTTCATTTAAGAGAATATTTTTGGTGTAGA 11985
Query 23506 AGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCAC 23565
| |||||| | | |||||| || ||||| || ||||| || || ||||| ||||
Sbjct 11986 AAGTCTCAAATTCAGGATCTTCGGCTGCACGTATTTCTTGGGAAACGAAGTCATAGGCAC 12045
Query 23566 GAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAA 23625
| || || | || || || | | |||| || | | ||| | ||| | || || |
Sbjct 12046 GTAGGTTCAAGGCCAGACCGACTACCCCAAGAGCACTCATCCATAAACCGGTTACTGGTA 12105
Query 23626 CAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTG 23685
|||| ||||||||||| || |||||||| |||||| ||| |||||||| || ||||| |
Sbjct 12106 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAAATTTGGG 12165
Query 23686 ACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACG 23745
|||||||||| || || || ||||| ||||| || || || | ||||| | | || |
Sbjct 12166 ACCAAAAACGGTTAGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAG 12225
Query 23746 CTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCAT 23805
| || || |||||| || ||||| || | | ||||| || || ||| | ||||
Sbjct 12226 CCCGGAATGTATTTGCCCCATCACCATCCTCGAATAAAGTATTTTCTACGGTAGCACCAT 12285
Query 23806 GAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGT 23865
||||||| | || || || | |||| || ||||||||||||||||||||| || ||||
Sbjct 12286 GAATAGCGCATAGCAGAGCGGCGCCCAATACACCAGCAACTCCCATCATATGAAAAGGGT 12345
Query 23866 TGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACAC 23925
| |||||||| |||||||| || || | ||||| | ||| | ||||| || || ||||
Sbjct 12346 TCAGCGTCCAATTATGAAACCCTTGAAAAAAGAGGATGAATCGAAAAATAGCTGCTACAC 12405
Query 23926 CGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACA 23985
| ||||| ||||||||||||||| || || || | ||||| || ||||||||||| |
Sbjct 12406 CAAAACTAGGCGCAAAGAACCAACCAGATTGACCTAGTGGATAAATTAGGAATACAGAAA 12465
Query 23986 CGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA- 24044
| || |||||||| || || || || || || ||||| || || || | | || |||
Sbjct 12466 CAAAAACAGCAATTGGGCCCGAGAATGCTATTGCATTATAAGGGCGCAATTGAA-CAGAT 12524
Query 24045 CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCA 24104
|| || ||||| || || ||||||||||||||||| ||| | || ||||| || ||||||
Sbjct 12525 CGAGCAAGTTCGAATTGGCGTAACATAAAACCTATTAGTCCGAAAGCACCATGAAGAGCA 12584
Query 24105 ACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGA 24164
||||| | ||| || || || | ||| ||| || ||| || ||||| | ||||||
Sbjct 12585 ACAAAAGTCCACAGGCCGCCTAATTGACACCAACGAGTAAAATCGCCTTGTGCTTCAGGA 12644
Query 24165 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCG-T 24223
||||| || | | | ||| || | | | | |||||| || || || ||||| | |
Sbjct 12645 CCCCACAGCAACAACAAAGAGTGTGCTAAACTATTAGCAGGAGTAGAAACGGCTGCGGTT 12704
Query 24224 AAGAAAGTTAGCA-CCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTAA 24282
|||||| | ||| || || | ||| ||||| || | ||||| || ||||| || |
Sbjct 12705 AAGAAA--TTGCAGCCTTCCAAATATGAACTGGCCAACCCATGAGTATACCATGAAGTTA 12762
Query 24283 CAAAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAGGA 24342
|||| | || || |||| |||||| || | || | ||||||| |||| || | |
Sbjct 12763 CAAACGTCGTACCTGTAAACCAACCCCCTACAGCGAAATAAGCACAAGGAAAGAGCAATA 12822
Query 24343 GTCCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATGTCAA 24402
| ||||||||||| ||||| || || || || | | |||||| |||| || ||||
Sbjct 12823 GACCAGACCAACCTACAAAAACGAAACGGTCTCTACGTAACCAGTCATCCATAATATCAA 12882
Query 24403 A 24403
|
Sbjct 12883 A 12883
>seq15224
Length=172684
Score = 269 bits (298), Expect = 4e-67
Identities = 302/404 (75%), Gaps = 0/404 (0%)
Strand=Plus/Minus
Query 26926 ACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTTGAATGAAGCATATTGG 26985
|| ||||| ||||| | ||||||||| || ||||| || |||||||| ||||||||||
Sbjct 89722 ACCGGCCAAGCAGCTAAGAAGAAGTGTAAAGAACGGGAATTGTTGAAACTAGCATATTGG 89663
Query 26986 AAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTAGGTCTCTTCTTCTTGA 27045
|||||||| ||||| || || |||| || || ||||| || || || ||||| ||||||
Sbjct 89662 AAGATCAATCGACCAAAATAAACATGAGCAGCTACGATATTATAAGTTTCTTCCTCTTGA 89603
Query 27046 CCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTCACGGACGAGTGAAGAT 27105
|| || | ||||| | || || ||| |||| || || || | | | |||
Sbjct 89602 CCAAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTAATCAAACTAGAA 89543
Query 27106 GTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAATACCCCAGCAACACCG 27165
|| |||| || ||||||||| || || || || |||||||| ||||| |||||
Sbjct 89542 GTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCGCCGAATACACCAGCTACACCC 89483
Query 27166 AGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAATACAAGCATGTAGTTA 27225
| |||||| || |||||||||||||| ||||| || ||||||||||||| |||| ||||
Sbjct 89482 AACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAAGTTG 89423
Query 27226 AAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACCTTGACCGAAAGGATAG 27285
||||||||||| || || | ||||||| |||| || || |||||||| | ||||||
Sbjct 89422 AAAGTACCAGAAATTCCTAAAGGCATACCATCAGAAAAGCTTCCTTGACCAATTGGATAG 89363
Query 27286 ACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGC 27329
| | ||| || ||| | || || || || ||||| ||||||||
Sbjct 89362 ATCAAGAAAACGGCAGTAGCCGCTGCAACCGGAGCTGAATATGC 89319
Score = 120 bits (132), Expect = 4e-22
Identities = 128/169 (76%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 27431 AAGGACCACCGTTATACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGT 27490
|||||||||| ||||| ||||||||||| | |||||||||||||| ||||| || || |
Sbjct 89312 AAGGACCACCATTATATAACCACTCATCAACAGATGCTGCTTCCCATATTGGATAAAAAT 89253
Query 27491 GGAGACCGATTGCATTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACA 27550
| | || || || ||| | || | || ||||||||||| || ||||| || || |
Sbjct 89252 GCAACCCTATAGCTGCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAA 89193
Query 27551 TAAGTGAACCAGCAACGGGTTCACGAATACCGTCAATATCGACGGGTGG 27599
|| || || | ||| ||||||||||| || ||||||| ||| || ||
Sbjct 89192 GTAGAGATCCCGAAACAGGTTCACGAATCCCATCAATATTGACTGGCGG 89144
Score = 118 bits (130), Expect = 1e-21
Identities = 135/182 (74%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 26884 GCCATCGTGGATACACCAAGTGCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGG 26943
||||| ||| | ||| | || || ||||| || || || || ||||| ||||| | |
Sbjct 89915 GCCATAGTGCTAATACCTAAAGCAGTAAACCAAATACCGACTACCGGCCAAGCAGCTAAG 89856
Query 26944 AAGAAGTGCAAGGAACGTGAGTTGTTGAATGAAGCATATTG------GAAGATCAAACGA 26997
|||||||| || ||||| || |||||||| ||||||||| ||||||||| |||
Sbjct 89855 AAGAAGTGTAAAGAACGAGAATTGTTGAAACTAGCATATTGATATTGGAAGATCAATCGA 89796
Query 26998 CCGAAGTAGCCATGTGCTGCGACGATGTTGTAGGTCTCTTCTTCTTGACCGAACTTATAA 27057
|| || || ||||| || || ||||| || || || ||||| |||||||| || | |||
Sbjct 89795 CCAAAATAACCATGAGCAGCTACGATATTATAAGTTTCTTCCTCTTGACCAAATCTGTAA 89736
Query 27058 CC 27059
||
Sbjct 89735 CC 89734
Score = 96.9 bits (106), Expect = 5e-15
Identities = 113/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 27523 GCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCAACGGGTTCACGAATACCG 27582
||||||||||| || ||||| || || | || || || | ||| ||||||||||| ||
Sbjct 89125 GCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCCGAAACAGGTTCACGAATCCCA 89066
Query 27583 TCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA-GCAGACAGTTGCTGCTAA 27641
||||||| ||| || || || || ||||| || | ||| || |||| |||||| | ||
Sbjct 89065 TCAATATTGACTGGCGGAGCAGCAATGAAGGCTATAATAAATACAGA-AGTTGCAGTCAA 89007
Query 27642 CAGTGTTGGGATCATCAGTACACCGAACCA 27671
| ||| || ||||||| ||||| |||||
Sbjct 89006 TAATGTAGGAATCATCAAAACACCAAACCA 88977
>seq15824
Length=139560
Score = 149 bits (164), Expect = 8e-31
Identities = 185/250 (74%), Gaps = 4/250 (2%)
Strand=Plus/Plus
Query 23846 TCCCATCATATGGAAGGGGTTGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAA 23905
|||||||||||| || | ||| ||||||| |||||||| || || | || || | |||
Sbjct 61116 TCCCATCATATGAAAAGAGTTCTGCGTCCAATTATGAAACCCTTGAAAAAATAGGATGAA 61175
Query 23906 CCTGAAAATCGCCGCAACACCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGG 23965
| ||||| || || ||||| ||||| ||||||||||||||| || || | | ||
Sbjct 61176 TCGAAAAATAGCTGCTACACCAAAACTAGGCGCAAAGAACCAACCAGATTGATCTAGTGG 61235
Query 23966 ATAGATGAGGAATACAGACACGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTA 24025
||| || ||||||||||| || || |||||||| || || || || || || ||||| ||
Sbjct 61236 ATAAATTAGGAATACAGAAACAAAAACAGCAATTGGGCCCGAGAATGCTATTGCATTATA 61295
Query 24026 GGGACGGATTCCAATTAGA-CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTG 24084
|| || | | || |||| || || ||||| || || |||| ||||||| ||| |||
Sbjct 61296 AGGGCGCAAT-TAAATAGATCGAGCAAGTTCGAATTGGCGTA--ATAAAACTTATTAGTC 61352
Query 24085 CAAAGGCACC 24094
| || ||||
Sbjct 61353 CGAAAACACC 61362
>seq15982
Length=164312
Score = 138 bits (152), Expect = 2e-27
Identities = 314/464 (68%), Gaps = 15/464 (3%)
Strand=Plus/Minus
Query 23910 AAAATCGCCGCAACACCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAG 23969
||||| || | | ||| ||||| |||||||| |||||| || || || | |||||
Sbjct 20420 AAAATAGCTGTTATACCAAAACTAGGCGCAAAAAACCAACTAGATTGACCTAGTGGATAA 20361
Query 23970 ATGAGGAATACAGACACGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGA 24029
|| ||||||||| | || || || |||| || || || || ||||| ||| | || |
Sbjct 20360 ATTAGGAATACATAAACCAAAACGACAATTGGGCCTGAGAATGCAATTGCACTATAAGAG 20301
Query 24030 CGGATTCCAATTAGA-CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAA 24088
| | | || ||| || || |||| || || ||||||||||||||||| ||| ||||
Sbjct 20300 CACAATTGAAC-AGATCGCGCATGTTCGAATTGGCGTAACATAAAACCTATTAGTCCAAA 20242
Query 24089 GGCACCGTGGAGAGCAACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTC 24148
||||| || |||| |||||| | ||| || || || | ||| ||| || ||| |
Sbjct 20241 AGCACCATGAAGAGTAACAAAAGTCCACAGGCC-CCTAATTGACACCAACGAGTAAAACC 20183
Query 24149 CCCTTGAGACTCAGGACCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGT 24208
||||| | ||| ||||| || | || ||| || | | | || |||| | ||
Sbjct 20182 GCCTTGTGCTTCAAGACCCACAACAACAA----AGAGTGTGCTAAACTGTTAGCATGAGT 20127
Query 24209 CGAGACAGCTGCCG-TAAGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCA---- 24263
|| || ||||| | ||||||| || ||| || | ||| |||| || | |||
Sbjct 20126 AGAAACGGCTGCGGTTAAGAAA-TTGCAACCTTCCAAATATGAACGGGCCAACCCATGAT 20068
Query 24264 TGGGTGTACCAACTCGTAACAAAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAA 24323
|| || ||||| || ||||| | || ||| ||| |||||| || | ||| | || |
Sbjct 20067 TGAGTATACCATGAAGTTACAAACGTCGTACCAATAAACCAACCCCCTACGGCGAAATGA 20008
Query 24324 GCAGTGGGAAGAAGTAGGAGTCCAGACCAACCCACAAAGACAAA 24367
|| |||| ||| | || | |||||| || ||||| | |||
Sbjct 20007 ACA--AGGAAAAAGCAATAGACTAGACCACCCTACAAAAAAAAA 19966
>seq10333
Length=16991
Score = 136 bits (150), Expect = 5e-27
Identities = 173/238 (73%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 23606 CCAAAGACCCATGACAGGAACAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAA 23665
||| | ||| | || || ||||| ||||||||||| || |||||||| |||||| |||
Sbjct 6883 CCATAAACCTGTTACTGGTACAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAA 6824
Query 23666 CGCAACCCCGAAGATTTGTGACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTC 23725
|||||||| || ||||| ||||||||||| || || || ||||| ||||| || || ||
Sbjct 6823 AGCAACCCCAAAAATTTGGGACCAAAAACGGTTAGCGGTGACCATTGAATAAGTTTCTTC 6764
Query 23726 CTCCTGAGTGGAATCGAACGCTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGT 23785
| ||||| | | || || || || |||||| || ||||| || | | ||
Sbjct 6763 AGCTTGAGTTGGGTTAAAAGCCCGGAATGTATTTGCCCCATCACCATCCTCGAATAAAGT 6704
Query 23786 ATTCTCGACAGTAACTCCATGAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCA 23843
||| || || ||| | ||||||||||| | || || || | |||| || |||||||
Sbjct 6703 ATTTTCTACGGTAGCACCATGAATAGCGCATAGCAGAGCGGCGCCCAATACACCAGCA 6646
>seq12771
Length=31889
Score = 134 bits (148), Expect = 2e-26
Identities = 184/254 (72%), Gaps = 6/254 (2%)
Strand=Plus/Plus
Query 23846 TCCCATCATATGGAAGGGGTTGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAA 23905
|||||||||||| || ||||| | |||||| |||||||| || | | ||||| | | |
Sbjct 8369 TCCCATCATATGAAAAGGGTTCAACGTCCAATTATGAAACCCTCGAAAAAAGAGGATGGA 8428
Query 23906 CCTGAAAATCGCCGCAACA----CCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCA 23961
| ||||| | || ||| || ||||| ||||||||||||||| || || | |
Sbjct 8429 TCGAAAAATAGTTGCTACATACACCAAAACTAGGCGCAAAGAACCAACCAGATTGATCTA 8488
Query 23962 AAGGATAGATGAGGAATACAGACACGAATACAGCAATAGGACCAGAAAAAGCAATCGCAT 24021
||||| || ||||||||||| || || ||| |||| | || || || || || ||||
Sbjct 8489 GTGGATAAATTAGGAATACAGAAACAAAAACAACAATTTGGCCCGAGAATGCTATTGCAT 8548
Query 24022 TGTAGGGACGGATTCCAATTAGA-CGTGCCAGTTCAAACTGACGTAACATAAAACCTATA 24080
| || || || | | || ||| || || ||||| || || |||||||||||||||||
Sbjct 8549 TATAAGGGCGCAATTGAA-CAGATCGAGCAAGTTCGAATTGGCGTAACATAAAACCTATT 8607
Query 24081 AGTGCAAAGGCACC 24094
||| | || | |||
Sbjct 8608 AGTCCGAAAGTACC 8621
>seq5553
Length=10595
Score = 134 bits (148), Expect = 2e-26
Identities = 313/464 (67%), Gaps = 15/464 (3%)
Strand=Plus/Minus
Query 23910 AAAATCGCCGCAACACCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAG 23969
||||| || | | ||| ||||| |||||||| |||||| || || || | |||||
Sbjct 5930 AAAATAGCTGTTATACCAAAACTAGGCGCAAAAAACCAACTAGATTGACCTAGTGGATAA 5871
Query 23970 ATGAGGAATACAGACACGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGA 24029
|| ||||||||| | || || || |||| || || || || ||||| ||| | || |
Sbjct 5870 ATTAGGAATACATAAACCAAAACGACAATTGGGCCTGAGAATGCAATTGCACTATAAGAG 5811
Query 24030 CGGATTCCAATTAGA-CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAA 24088
| | | || ||| || || |||| || || ||||||||||||||||| ||| ||||
Sbjct 5810 CACAATTGAAC-AGATCGCGCATGTTCGAATTGGCGTAACATAAAACCTATTAGTCCAAA 5752
Query 24089 GGCACCGTGGAGAGCAACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTC 24148
||||| || |||| |||||| | ||| || || || | ||| ||| || ||| |
Sbjct 5751 AGCACCATGAAGAGTAACAAAAGTCCACAGGCC-CCTAATTGACACCAACGAGTAAAACC 5693
Query 24149 CCCTTGAGACTCAGGACCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGT 24208
||||| | ||| ||||| || | || ||| || | | | || |||| | ||
Sbjct 5692 GCCTTGTGCTTCAAGACCCACAACAACAA----AGAGTGTGCTAAACTGTTAGCATGAGT 5637
Query 24209 CGAGACAGCTGCCG-TAAGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCA---- 24263
|| || ||||| | ||||||| || ||| || | ||| |||| || | |||
Sbjct 5636 AGAAACGGCTGCGGTTAAGAAA-TTGCAACCTTCCAAATATGAACGGGCCAACCCATGAT 5578
Query 24264 TGGGTGTACCAACTCGTAACAAAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAA 24323
|| || ||||| || ||||| | || ||| ||| |||||| || | ||| | || |
Sbjct 5577 TGAGTATACCATGAAGTTACAAACGTCGTACCAATAAACCAACCCCCTACGGCGAAATGA 5518
Query 24324 GCAGTGGGAAGAAGTAGGAGTCCAGACCAACCCACAAAGACAAA 24367
|| |||| ||| | || | |||||| || | ||| | |||
Sbjct 5517 ACA--AGGAAAAAGCAATAGACTAGACCACCCTAAAAAAAAAAA 5476
>seq8938
Length=12132
Score = 125 bits (138), Expect = 1e-23
Identities = 221/321 (69%), Gaps = 2/321 (1%)
Strand=Plus/Plus
Query 23386 ATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCAATTACAGGAAAGTTTTCGTGTGGTT 23445
|| ||||||| || || | || || | |||||| | || |||||| || || |
Sbjct 1718 ATTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 1777
Query 23446 GGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGA 23505
| || || || |||||| |||| | || | || || | ||||||||| |||||||
Sbjct 1778 GATCTTGAGCCACCATCCAAGCACGAATACCTTCATTTAAGAGAATATTTTTGGTGTAGA 1837
Query 23506 AGGTCTCATACGAACCATCTTCAGCAGCACGAATCT--CTTGACTCACAAAATCATAAGC 23563
| |||||| | | |||||| || ||||| || | |||| || || ||||| ||
Sbjct 1838 AAGTCTCAAATTCAGGATCTTCGGCTGCACGTATATTTCTTGGGAAACGAAGTCATAGGC 1897
Query 23564 ACGAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGG 23623
||| || || | || || || | | |||| || | | ||| | | | | || ||
Sbjct 1898 ACGTAGGTTCAAGGCCAGACCGACTACCCCAAGAGCACTCATCCATAAAACGGTTACTGG 1957
Query 23624 AACAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTG 23683
||||| ||||||||||| || ||||||| |||||| ||| |||||||| || | |||
Sbjct 1958 TACAAATAACATAAAGAAATGTAACCAACTTTTATTGGAAAAAGCAACCCCAAAAAGTTG 2017
Query 23684 TGACCAAAAACGATTTGCTGT 23704
||||||||||| || || ||
Sbjct 2018 GGACCAAAAACGGTTAGCGGT 2038
>seq14024
Length=49420
Score = 113 bits (124), Expect = 6e-20
Identities = 249/367 (68%), Gaps = 11/367 (3%)
Strand=Plus/Minus
Query 24045 CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCA 24104
|| || |||| || || |||||||||| |||||| ||| | || ||||| || ||||||
Sbjct 35000 CGAGCAAGTTTGAATTGGCGTAACATAAGACCTATTAGTCCGAAAGCACCATGAAGAGCA 34941
Query 24105 ACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGA 24164
||||| | ||| | || || | ||| |||| || ||| || ||||| | ||||||
Sbjct 34940 ACAAAAGTCCACTGGCCGCCTAATTGACGCCAACGAGTAAAATCGCCTTGTGCTTCAGGA 34881
Query 24165 CCCCA-AAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCG- 24222
||||| || | || || ||| || | | | | |||||| || || | ||| |
Sbjct 34880 CCCCACAACAACAACAA-AGAGTGTGCTAAACTATTAGCAGGAGTAGAATCGATTGCGGT 34822
Query 24223 TAAGAAAGTTAGCA-CCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTA 24281
||||||| | ||| || || | ||| ||||| || | ||||| || ||||| ||
Sbjct 34821 TAAGAAA--TTGCAGCCTTCCAAATATGAACTGGCCATCCCATGAGTATACCATGAAGTT 34764
Query 24282 ACAAAAGCTGTGCC-----AGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAA 24336
||||| | || || | ||| |||||| || | |||| ||||||| |||| |
Sbjct 34763 ACAAACGTCGTACCTGTAAATTAAACCAACCCCCTACAGCAAAATAAGCACAAGGAAAGA 34704
Query 24337 GTAGGAGTCCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGA 24396
| | || || ||| |||| ||||| || || |||| | | |||||| |||| |
Sbjct 34703 GCAATAGACCCGACTAACCTACAAAAACGAAATGATCTCTACGTAACCAGTCATCCATAA 34644
Query 24397 TGTCAAA 24403
| |||||
Sbjct 34643 TATCAAA 34637
>seq13902
Length=44788
Score = 109 bits (120), Expect = 7e-19
Identities = 239/346 (69%), Gaps = 18/346 (5%)
Strand=Plus/Plus
Query 23994 GCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA-CGTGCCAG 24052
||||| || || || || || || ||||| || || || | | || ||| || || ||
Sbjct 6084 GCAATTGGGCCCGAGAATGCTATTGCATTATAAGGGCGCAATTGAAC-AGATCGAGCAAG 6142
Query 24053 TTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCAACAAAGGA 24112
||| || || ||||||||||||||||| ||| || ||||| || ||| ||||||| |
Sbjct 6143 TTCGAATTGGCGTAACATAAAACCTATTAGTCTGAAAGCACCATGAAGATCAACAAAAGT 6202
Query 24113 CCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGACCCCAAAG 24172
||| | || || | ||| ||| || ||| || ||||| | ||||||| ||| ||
Sbjct 6203 CCACGGGCCGCCTAATTGACACCAACGAGTAAAATCGCCTTGTGCTTCAGGACTCCACAG 6262
Query 24173 -TAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCG-TAAGAAAG 24230
| || || ||| || | | | | |||||| || || |||||||| | |||||||
Sbjct 6263 AAACAACAAAAGAGTGTGCTAAACTATTAGCAGGAGTGGAAACAGCTGCGGTTAAGAAA- 6321
Query 24231 TTAGCACCC--TCAAGATAGGAACTAG-CAAGT-------CCATGGGTGTACCAACTCGT 24280
||| || || |||| ||| ||||| | ||||| ||||| || ||||| ||
Sbjct 6322 TTA-CAGCCTTTCAA-ATATGAACTGGCCAAGTGGCCAACCCATGAGTATACCATGAGGT 6379
Query 24281 AACAAAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCA 24326
||||| | || | |||| |||||| || | || | |||||||
Sbjct 6380 TACAAACGTCGTACTTGTAAACCAACCCCCTACAGCGA-ATAAGCA 6424
>seq45009
Length=33691
Score = 91.5 bits (100), Expect = 2e-13
Identities = 127/176 (72%), Gaps = 2/176 (1%)
Strand=Plus/Plus
Query 23994 GCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA-CGTGCCAG 24052
||||| || || || || || || ||||| || || || | | || ||| || || ||
Sbjct 13749 GCAATTGGGCCCGAGAATGCTATTGCATTATAAGGGCGCAATTGAAC-AGATCGAGCAAG 13807
Query 24053 TTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCAACAAAGGA 24112
||| || || ||||||||||||||||| ||| | || ||||| || ||||||||||| |
Sbjct 13808 TTCGAATTGGCGTAACATAAAACCTATTAGTCCGAAAGCACCATGAAGAGCAACAAAAGT 13867
Query 24113 CCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGACCCC 24168
||| | || || | ||| ||| || ||| || ||||| | ||||||| ||
Sbjct 13868 CCACGGGCCGCCTAATTGACACCAACGAGTAAAATCGCCTTGTGCTTCAGGACNCC 13923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665119327356160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |