Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19]
45,088 sequences; 567,661,845 total letters
Query= NC_021536.1
Length=171797
Score E
Sequences producing significant alignments: (Bits) Value
seq11475 619 1e-172
seq15224 271 8e-68
seq8938 196 5e-45
seq10333 165 9e-36
seq14024 154 2e-32
seq12877 136 4e-27
seq15982 127 2e-24
seq5553 123 3e-23
seq12771 116 4e-21
seq15824 114 1e-20
seq13902 107 2e-18
>seq11475
Length=22225
Score = 619 bits (686), Expect = 1e-172
Identities = 753/1017 (74%), Gaps = 8/1017 (1%)
Strand=Plus/Minus
Query 152359 TTTGATGTCCTGGATGACTGGCTTAAG-AGAGACCGTTTCGTTTTTGTTGGTTGGTCTGG 152417
|||||| | ||||||||||| ||| | |||||||||||||||||||| |||||||||||
Sbjct 12883 TTTGATATTATGGATGACTGG-TTACGTAGAGACCGTTTCGTTTTTGTAGGTTGGTCTGG 12825
Query 152418 ACTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTT 152477
|| | || ||||| ||||||| | ||| | || |||||| |||| || || || ||
Sbjct 12824 TCTATTGCTCTTTCCTTGTGCTTATTTCGCTGTAGGGGGTTGGTTTACAGGTACGACGTT 12765
Query 152478 CGCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGC-GCAAACTTTC 152536
| || ||||||||||| |||||||| ||||| ||| |||| ||| |||| ||||
Sbjct 12764 TGTAACTTCATGGTATACTCATGGGTTGGCCAGTTCATATTTGGAAGGCTGCAA--TTTC 12707
Query 152537 TTA-CTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTCTCTGG 152595
||| | || || ||||||||||| || || | | | || ||| | || | || |||
Sbjct 12706 TTAACCGCAGCCGTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTGCTGTGG 12647
Query 152596 GGTCCTGAGGCTCAAGGGGATTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGGCTTTT 152655
|||||||| || ||||| ||||| | ||| ||| | || || || ||| |||||
Sbjct 12646 GGTCCTGAAGCACAAGGCGATTTTACTCGTTGGTGTCAATTAGGCGGCCTGTGGACTTTT 12587
Query 152656 GTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAACTGGCA 152715
|| || || || || ||||||| ||||| ||||| ||| | ||||| || ||||| ||
Sbjct 12586 GTTGCTCTTCATGGTGCTTTCGGACTAATAGGTTTTATGTTACGCCAATTCGAACTTGCT 12527
Query 152716 CG-TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTT 152774
|| ||| || | | || || || ||||| || || ||||| || || || ||||||||
Sbjct 12526 CGATCTGTTCAAT-TGCGCCCTTATAATGCAATAGCATTCTCGGGCCCAATTGCTGTTTT 12468
Query 152775 TGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTT 152834
|||| || || || || || || || |||||||| ||||||| || || || |||
Sbjct 12467 TGTTTCTGTATTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTT 12408
Query 152835 CGGGGTCGCAGCAATCTTCCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGGACATT 152894
|| || ||||| || || |||||| | ||||| ||||||| || || || ||||| |
Sbjct 12407 TGGTGTAGCAGCTATTTTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACGCT 12348
Query 152895 GAATCCGTTTCATATGATGGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCTGCCAT 152954
||| || |||||||||||||| ||||| ||| | ||||| | || |||| | || ||
Sbjct 12347 GAACCCTTTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCCGCTCTGCTATGCGCTAT 12288
Query 152955 TCATGGTGTTACAGTAGAGAATACTTTGTATCAAGATGGTGAACAAGCAAACACTTTCAA 153014
|||||||| ||| ||||| |||||||| | | |||||||| ||||| || |||
Sbjct 12287 TCATGGTGCTACCGTAGAAAATACTTTATTCGAGGATGGTGATGGGGCAAATACATTCCG 12228
Query 153015 AGCTTTCGACAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTG 153074
||||| || ||||||| ||||| || ||||| ||||| || ||||||||||| ||
Sbjct 12227 GGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGTTTTTG 12168
Query 153075 GTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTT 153134
|||||| || ||||| |||||||| ||||||||| ||| | |||||||||||| | ||
Sbjct 12167 GTCCCAAATTTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 12108
Query 153135 TGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCT 153194
|||||| || | ||| | |||| | || |||| | | ||||| || | || ||
Sbjct 12107 TGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTCTGGCCTTGAACCT 12048
Query 153195 TCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAATTTGAGAC 153254
||||| || || || || || |||||||| | || | ||||||||||||||||||||
Sbjct 12047 ACGTGCCTATGACTTCGTTTCCCAAGAAATACGTGCAGCCGAAGATCCTGAATTTGAGAC 11988
Query 153255 GTTCTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTGTTGA 153314
||||| || || ||||| || || || |||||| ||||||||||| |||| || ||
Sbjct 11987 TTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCTTGGATGGCGGCTCAAGA 11928
Query 153315 CCAACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCACGAGGCAACGCTCT 153371
|| |||||||| ||| | | |||||||| ||||| | || || || ||||||||
Sbjct 11927 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 11871
>seq15224
Length=172684
Score = 271 bits (300), Expect = 8e-68
Identities = 303/405 (75%), Gaps = 0/405 (0%)
Strand=Plus/Plus
Query 151225 TGCATACTCTGCTCCAGTTGCTGCTGCGAGTGCAGTGTTCCTCGTCTATCCTTTCGGTCA 151284
|||||| || ||||| ||||| || || | ||| || ||| | ||||||| | |||||
Sbjct 89318 TGCATATTCAGCTCCGGTTGCAGCGGCTACTGCCGTTTTCTTGATCTATCCAATTGGTCA 89377
Query 151285 AGGTTCTTTCTCTGATGCAATGCCCCTGGGTATTTCTGGCACATTCAACTACATGCTTGT 151344
||| || ||||||| ||||| | || |||||||| || ||||||| |||| ||||
Sbjct 89378 AGGAAGCTTTTCTGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAACTTCATGATTGT 89437
Query 151345 CTTCCAAGCAGAGCACAACATTCTGATGCACCCCTTCCATATGCTTGGTGTGGCTGGTGT 151404
||||| || ||||||||||| || |||||||| || || ||| | ||||| ||||||||
Sbjct 89438 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTGGGTGTAGCTGGTGT 89497
Query 151405 CTTCGGTGGATCGCTCTTCTCGGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCG 151464
||||| || || || || || ||||| ||||| |||| |||||| || || |
Sbjct 89498 ATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATTAG 89557
Query 151465 TGAGACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGAC 151524
|| ||||| ||||| || || || | ||||||| || |||||||| ||||| ||
Sbjct 89558 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAAC 89617
Query 151525 CTACAACATCGTTGCCGCACACGGTTACTTTGGTCGTCTCATCTTCCAATACGCTTCCTT 151584
|| || ||||| || || || | ||| |||||||| | ||||||||||| ||| ||
Sbjct 89618 TTATAATATCGTAGCTGCTCATGTTTATTTTGGTCGATTGATCTTCCAATATGCTAGTTT 89677
Query 151585 CAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGT 151629
||||||||||||||| | ||||||||| | || || ||||| ||
Sbjct 89678 CAACAATTCCCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCGGT 89722
Score = 131 bits (144), Expect = 2e-25
Identities = 138/182 (76%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 151496 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCACACGGTTACTTT 151555
||||||| || |||||||| ||||| || || || ||||| || || || ||||| |||
Sbjct 89734 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTT 89793
Query 151556 GGTCGTCTCATCTTCCAATAC------GCTTCCTTCAACAATTCCCGTTCGCTGCACTTC 151609
||||| | ||||||||||| ||| ||||||||||| ||||| | ||||||
Sbjct 89794 GGTCGATTGATCTTCCAATATCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTC 89853
Query 151610 TTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCAGCACCATG 151669
||| | || || ||||| || |||||||| ||||| ||||| | ||| | ||||| |||
Sbjct 89854 TTCTTAGCTGCTTGGCCGGTAGTCGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATG 89913
Query 151670 GC 151671
||
Sbjct 89914 GC 89915
Score = 122 bits (134), Expect = 1e-22
Identities = 121/157 (77%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 150968 ATCGATGGCATCCGTGAACCCGTTGCTGGTTCTCTGATGTACGGTAACAACATCATCTCT 151027
|| ||||| || |||||||| ||| | || ||||| | ||||| ||||| || || |||
Sbjct 89156 ATTGATGGGATTCGTGAACCTGTTTCGGGATCTCTACTTTACGGAAACAATATTATTTCT 89215
Query 151028 GGTGCTGTTGTTCCTTCTTCTAACGCTATCGGTCTGCACTTCTATCCCATCTGGGAAGCA 151087
||||| || ||||| ||||| ||||| || |||| || ||||| || |||||||||
Sbjct 89216 GGTGCCATTATTCCTACTTCTGCAGCTATAGGGTTGCATTTTTATCCAATATGGGAAGCA 89275
Query 151088 GCCTCTCTCGATGAATGGCTCTACAACGGTGGTCCTT 151124
|| ||| | ||||| ||| | || || ||||||||||
Sbjct 89276 GCATCTGTTGATGAGTGGTTATATAATGGTGGTCCTT 89312
>seq8938
Length=12132
Score = 196 bits (216), Expect = 5e-45
Identities = 237/322 (74%), Gaps = 2/322 (1%)
Strand=Plus/Minus
Query 153058 ACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTT 153117
|| ||||||||||| |||||||| | ||||| |||||||| ||||||| | ||| |
Sbjct 2038 ACCGCTAACCGTTTTTGGTCCCAACTTTTTGGGGTTGCTTTTTCCAATAAAAGTTGGTTA 1979
Query 153118 CATTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATT 153177
|||||||||||| | |||||||| || | | | | |||| | || |||| | |
Sbjct 1978 CATTTCTTTATGTTATTTGTACCAGTAACCGTTTTATGGATGAGTGCTCTTGGGGTAGTC 1919
Query 153178 GGTCTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAAATCA--GGGCGTCAG 153235
||||| || | || || ||||| || || || || || |||||||| | || | |
Sbjct 1918 GGTCTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCCCAAGAAATATACGTGCAGCCG 1859
Query 153236 AAGATCCTGAATTTGAGACGTTCTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTG 153295
||||||||||||||||||| ||||| || || ||||| || || || |||||| ||||||
Sbjct 1858 AAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTG 1799
Query 153296 CTTGGTTGGCACCTGTTGACCAACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGC 153355
||||| ||| || || || |||||||| ||| | | |||||||| ||||| | |
Sbjct 1798 CTTGGATGGTGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTAC 1739
Query 153356 CACGAGGCAACGCTCTGTGATA 153377
| || || |||||||| | |||
Sbjct 1738 CCCGTGGAAACGCTCTTTAATA 1717
>seq10333
Length=16991
Score = 165 bits (182), Expect = 9e-36
Identities = 180/239 (75%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 152919 TGCAGGTATTTTGGGAGGGGCCTTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATAC 152978
||| ||| | ||||| | || |||| | || |||||||||| ||| ||||| |||||
Sbjct 6646 TGCTGGTGTATTGGGCGCCGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATAC 6705
Query 152979 TTTGTATCAAGATGGTGAACAAGCAAACACTTTCAAAGCTTTCGACAGCACTCAAGAAGA 153038
||| | | |||||||| ||||| || ||| ||||| || ||||||| ||
Sbjct 6706 TTTATTCGAGGATGGTGATGGGGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGA 6765
Query 153039 AGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTT 153098
||| || ||||| ||||| || ||||||||||| |||||||| || ||||| |||||||
Sbjct 6766 AGAAACTTATTCAATGGTCACCGCTAACCGTTTTTGGTCCCAAATTTTTGGGGTTGCTTT 6825
Query 153099 TAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGA 153157
| ||||||||| ||| | |||||||||||| | |||||||| || | ||| | ||||
Sbjct 6826 TTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACAGGTTTATGGA 6884
>seq14024
Length=49420
Score = 154 bits (170), Expect = 2e-32
Identities = 258/367 (70%), Gaps = 11/367 (3%)
Strand=Plus/Plus
Query 152359 TTTGATGTCCTGGATGACTGGCTTAAG-AGAGACCGTTTCGTTTTTGTTGGTTGGTCTGG 152417
|||||| | ||||||||||| ||| | ||||| | |||||||||||| |||| ||| ||
Sbjct 34637 TTTGATATTATGGATGACTGG-TTACGTAGAGATCATTTCGTTTTTGTAGGTTAGTCGGG 34695
Query 152418 ACTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACT-----GGGACT 152472
|| | || ||||| ||||||| ||||| | || |||||| ||| | || ||
Sbjct 34696 TCTATTGCTCTTTCCTTGTGCTTATTTTGCTGTAGGGGGTTGGTTTAATTTACAGGTACG 34755
Query 152473 ACTTTCGCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGC-GCAAA 152531
|| || | || ||||||||||| ||| |||| ||||| ||| |||| ||| ||||
Sbjct 34756 ACGTTTGTAACTTCATGGTATACTCATGGGATGGCCAGTTCATATTTGGAAGGCTGCAA- 34814
Query 152532 CTTTCTT-ACTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTC 152590
|||||| || || | ||||||||| || || | | | || ||| | || |
Sbjct 34815 -TTTCTTAACCGCAATCGATTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTGT 34873
Query 152591 TCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGG 152650
| ||||||||||| || ||||| ||||| | ||| ||| | || || | |||
Sbjct 34874 TGTGGGGTCCTGAAGCACAAGGCGATTTTACTCGTTGGCGTCAATTAGGCGGCCAGTGGA 34933
Query 152651 CTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAAC 152710
||||||| || || || || ||||||| ||||| ||| | ||| | ||||| || |||
Sbjct 34934 CTTTTGTTGCTCTTCATGGTGCTTTCGGACTAATAGGTCTTATGTTACGCCAATTCAAAC 34993
Query 152711 TGGCACG 152717
| || ||
Sbjct 34994 TTGCTCG 35000
>seq12877
Length=40778
Score = 136 bits (150), Expect = 4e-27
Identities = 141/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 153193 CTTCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAATTTGAG 153252
||| |||| || || || || || |||||||| | || | ||||||||||||||||||
Sbjct 746 CTTAGTGCCTATGACTTCGTTTCCCAAGAAATACGTGCAGCCGAAGATCCTGAATTTGAG 805
Query 153253 ACGTTCTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTGTT 153312
|| ||||| || || ||||| || || || |||||| ||||||||||| |||| ||
Sbjct 806 ACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCTTGGATGGCGGCTCAA 865
Query 153313 GACCAACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCACGAGGCAACGCTCTG 153372
|| || |||||||| ||| | | |||||||| ||||| | || || || ||||||||
Sbjct 866 GATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTT 925
Query 153373 TGATA 153377
| |||
Sbjct 926 TAATA 930
>seq15982
Length=164312
Score = 127 bits (140), Expect = 2e-24
Identities = 302/442 (68%), Gaps = 27/442 (6%)
Strand=Plus/Plus
Query 152399 TTTTTGTTGGTTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTT 152458
||||||| || |||||| | || | |||||||| || | || | || | || ||||
Sbjct 19970 TTTTTGTAGGGTGGTCTAGTCTATTGCTTTTTCCT--TGTTCATTTCGCCGTAGGGGGTT 20027
Query 152459 GGCTTACTGGGACTACTTTCGCGACGAGTTGGTATACTCAC----GGGTTGGCAAGTTCC 152514
|| ||| ||| || || || | || ||||||||||| |||||||| ||||
Sbjct 20028 GGTTTATTGGTACGACGTTTGTAACTTCATGGTATACTCAATCATGGGTTGGCCCGTTCA 20087
Query 152515 TATCTGGAGGGC-GCAAACTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGATGCTATGG 152572
||| |||| || |||| ||||||| | || || |||||||||| ||||||
Sbjct 20088 TATTTGGAAGGTTGCAA--TTTCTTAACCGCAGCCGTTTCTACTC------ATGCTAACA 20139
Query 152573 GT----CATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCAAGG-GGATTTCGTCAGATG 152627
|| || ||||| || | | |||| || ||| || ||||| || ||| || | ||
Sbjct 20140 GTTTAGCACACTCTT-TGTTGTTGTGGG-TCTTGAAGCACAAGGCGGTTTTACTC-GTTG 20196
Query 152628 GATTCAGCTCGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGG 152687
| ||| | || || || ||| ||||||| | || || || ||||| | ||||| ||
Sbjct 20197 GTGTCAATTAGG-GGCCTGTGGACTTTTGTTACTCTTCATGGTGCTTTTGGACTAATAGG 20255
Query 152688 TTTCATGCTTCGCCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGCTA 152746
||| ||| | ||||| || |||| || || ||| || | | | | || | ||| |
Sbjct 20256 TTTTATGTTACGCCAATTCGAACATGCGCGATCTGTTCAAT-TGTGCTCTTATAGTGCAA 20314
Query 152747 TTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTC 152806
|||| ||||| || || || | ||||| ||| || || || || || || || ||||
Sbjct 20315 TTGCATTCTCAGGCCCAATTGTCGTTTTGGTTTATGTATTCCTAATTTATCCACTAGGTC 20374
Query 152807 AATCGAGTTGGTTTTTCGCTCC 152828
|||| ||||||||||| || ||
Sbjct 20375 AATCTAGTTGGTTTTTTGCGCC 20396
Score = 93.3 bits (102), Expect = 5e-14
Identities = 179/262 (68%), Gaps = 9/262 (3%)
Strand=Plus/Plus
Query 153118 CATTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATT 153177
|||||||||||| |||||||||| | | ||| | |||| | || ||| | |
Sbjct 21395 CATTTCTTTATGTTGTTTGTACCAATAACCGGTTTATGGATGAGTGCTCTTGAGTTAGTC 21454
Query 153178 GGTCTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAA 153237
||| | || | || || ||||| || || || || || ||||| | | | || | |||
Sbjct 21455 GGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCCCAAGATAAC-GTGCAGCTGAA 21513
Query 153238 GATCCTGAATTTGAGACGTTCTATACGAAGAATATCCTTT---TGAACGAA-----GGTC 153289
|||||| |||||||||| ||||| || | ||||| || | |||| | | | |
Sbjct 21514 GATCCTAAATTTGAGACTTTCTACACCAGAAATATTCTCTCAATGAAGGTATTCAGGTTA 21573
Query 153290 TTCGTGCTTGGTTGGCACCTGTTGACCAACCTCATGAGAACTTCGTGTTCCCTGAAGAGG 153349
||||||||||| |||| || || || |||||||| ||| | | |||||||| |||
Sbjct 21574 TTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGAAGG 21633
Query 153350 TATTGCCACGAGGCAACGCTCT 153371
| || | || ||||||||
Sbjct 21634 CTCTACCCTGTGGAAACGCTCT 21655
>seq5553
Length=10595
Score = 123 bits (136), Expect = 3e-23
Identities = 301/442 (68%), Gaps = 27/442 (6%)
Strand=Plus/Plus
Query 152399 TTTTTGTTGGTTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTT 152458
||||| | || |||||| | || | |||||||| || | || | || | || ||||
Sbjct 5480 TTTTTTTAGGGTGGTCTAGTCTATTGCTTTTTCCT--TGTTCATTTCGCCGTAGGGGGTT 5537
Query 152459 GGCTTACTGGGACTACTTTCGCGACGAGTTGGTATACTCAC----GGGTTGGCAAGTTCC 152514
|| ||| ||| || || || | || ||||||||||| |||||||| ||||
Sbjct 5538 GGTTTATTGGTACGACGTTTGTAACTTCATGGTATACTCAATCATGGGTTGGCCCGTTCA 5597
Query 152515 TATCTGGAGGGC-GCAAACTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGATGCTATGG 152572
||| |||| || |||| ||||||| | || || |||||||||| ||||||
Sbjct 5598 TATTTGGAAGGTTGCAA--TTTCTTAACCGCAGCCGTTTCTACTC------ATGCTAACA 5649
Query 152573 GT----CATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCAAGG-GGATTTCGTCAGATG 152627
|| || ||||| || | | |||| || ||| || ||||| || ||| || | ||
Sbjct 5650 GTTTAGCACACTCTT-TGTTGTTGTGGG-TCTTGAAGCACAAGGCGGTTTTACTC-GTTG 5706
Query 152628 GATTCAGCTCGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGG 152687
| ||| | || || || ||| ||||||| | || || || ||||| | ||||| ||
Sbjct 5707 GTGTCAATTAGG-GGCCTGTGGACTTTTGTTACTCTTCATGGTGCTTTTGGACTAATAGG 5765
Query 152688 TTTCATGCTTCGCCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGCTA 152746
||| ||| | ||||| || |||| || || ||| || | | | | || | ||| |
Sbjct 5766 TTTTATGTTACGCCAATTCGAACATGCGCGATCTGTTCAAT-TGTGCTCTTATAGTGCAA 5824
Query 152747 TTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTC 152806
|||| ||||| || || || | ||||| ||| || || || || || || || ||||
Sbjct 5825 TTGCATTCTCAGGCCCAATTGTCGTTTTGGTTTATGTATTCCTAATTTATCCACTAGGTC 5884
Query 152807 AATCGAGTTGGTTTTTCGCTCC 152828
|||| ||||||||||| || ||
Sbjct 5885 AATCTAGTTGGTTTTTTGCGCC 5906
>seq12771
Length=31889
Score = 116 bits (128), Expect = 4e-21
Identities = 177/249 (71%), Gaps = 6/249 (2%)
Strand=Plus/Minus
Query 152672 CTTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAACTGGCACG-TCTCATCGGTATC 152730
|||||| ||||| ||||| ||| | ||||| || ||||| || || ||| || | |
Sbjct 8617 CTTTCGGACTAATAGGTTTTATGTTACGCCAATTCGAACTTGCTCGATCTGTTCAAT-TG 8559
Query 152731 CGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTC 152790
|| || || ||||| || || ||||| || | || | |||||||||| || || ||
Sbjct 8558 CGCCCTTATAATGCAATAGCATTCTCGGGCCAAATTGTTGTTTTTGTTTCTGTATTCCTA 8499
Query 152791 ATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTC----GCAGC 152846
|| || || || | |||||| ||||||| || || || ||| || || ||| |
Sbjct 8498 ATTTATCCACTAGATCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTATGTAGCAAC 8439
Query 152847 AATCTTCCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGGACATTGAATCCGTTTCA 152906
|| || |||| | | ||||| ||| ||| || || || ||||| ||||| || |||||
Sbjct 8438 TATTTTTCGATCCATCCTCTTTTTTCGAGGGTTTCATAATTGGACGTTGAACCCTTTTCA 8379
Query 152907 TATGATGGG 152915
|||||||||
Sbjct 8378 TATGATGGG 8370
>seq15824
Length=139560
Score = 114 bits (126), Expect = 1e-20
Identities = 174/244 (71%), Gaps = 4/244 (2%)
Strand=Plus/Minus
Query 152673 TTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAACTGGCACG-TCTCATCGGTATCC 152731
||||| ||||| |||| || | ||||| || ||||| || || ||| | | | |
Sbjct 61357 TTTCGGACTAATAAGTTTTAT--TACGCCAATTCGAACTTGCTCGATCTATTTAAT-TGC 61301
Query 152732 GTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCA 152791
| || || ||||| || || ||||| || || || |||||||||||| || || || |
Sbjct 61300 GCCCTTATAATGCAATAGCATTCTCGGGCCCAATTGCTGTTTTTGTTTCTGTATTCCTAA 61241
Query 152792 TCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCAATCT 152851
| || || || | |||||| ||||||| || || || ||| || || ||||| || |
Sbjct 61240 TTTATCCACTAGATCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATTT 61181
Query 152852 TCCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGGACATTGAATCCGTTTCATATGA 152911
| |||||| | || || ||||||| || || || ||||| ||| | ||||||||||
Sbjct 61180 TTCGATTCATCCTATTTTTTCAAGGGTTTCATAATTGGACGCAGAACTCTTTTCATATGA 61121
Query 152912 TGGG 152915
||||
Sbjct 61120 TGGG 61117
>seq13902
Length=44788
Score = 107 bits (118), Expect = 2e-18
Identities = 241/355 (68%), Gaps = 14/355 (4%)
Strand=Plus/Minus
Query 152425 CTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGCGACG 152484
|| ||||| ||||||| | ||| | || |||||| |||| | || || || | ||
Sbjct 6435 CTCTTTCCTTGTGCTTAT-TCGCTGTAGGGGGTTGGTTTACAAGTACGACGTTTGTAACC 6377
Query 152485 AGTTGGTATACTCACGGG--------TTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTC 152536
||||||||||| ||| ||||| ||||| ||| || | ||| || ||||
Sbjct 6376 TCATGGTATACTCATGGGTTGGCCACTTGGCCAGTTCATATTTGAAAGGCTGTAA-TTTC 6318
Query 152537 TT-ACTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTT-CTGCTTCTCTG 152594
|| || || || ||||| ||||| || || | | | || ||| || || |||| ||
Sbjct 6317 TTAACCGCAGCTGTTTCCACTCCTGCTAATAGTTTAGCACACTCTTTTGTTGTTTCTGTG 6258
Query 152595 GGGTCCTGAGGCTCAAGGGGATTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGGCTTT 152654
| ||||||| || ||||| ||||| | ||| ||| | || || | ||| ||||
Sbjct 6257 GAGTCCTGAAGCACAAGGCGATTTTACTCGTTGGTGTCAATTAGGCGGCCCGTGGACTTT 6198
Query 152655 TGTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAACTGGC 152714
||| | || || || |||||| ||||| ||||| ||| | ||||| || ||||| ||
Sbjct 6197 TGTTGATCTTCATGGTGCTTTCAGACTAATAGGTTTTATGTTACGCCAATTCGAACTTGC 6138
Query 152715 ACG-TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGC 152768
|| ||| || | | || || || ||||| || || ||||| || || || ||
Sbjct 6137 TCGATCTGTTCAAT-TGCGCCCTTATAATGCAATAGCATTCTCGGGCCCAATTGC 6084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 549312632815360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |