Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19] 45,088 sequences; 567,661,845 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq15654 86.0 1e-11 >seq15654 Length=163759 Score = 86.0 bits (94), Expect = 1e-11 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || || || || || || || || | || || || | || Sbjct 112472 TGCAGATTTTCGTGAAGACCTTGACTGGGAAGACCATCACACTCGAGGTTGAGAGCAGCG 112531 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | ||||| || | || |||||| || || || || || || ||||| | Sbjct 112532 ATACGATCGACAATGTCAAGACAAAGATACAAGACAAGGAGGGAATACCGCCAGATCAGC 112591 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || || ||||||||||||||| | || || | ||||| |||| ||||||| Sbjct 112592 AGAGGCTGATCTTTGCAGGTAAACAACTCGAGGACGGGCGTACGTTGGCAGACTATAATA 112651 Query 146212 TACAAAAAGAATCGACTATCCA 146233 | || || |||||||| |||| Sbjct 112652 TTCAGAAGGAATCGACCCTCCA 112673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785723316616960