Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dianthus_20caryophyllus_20[genbank_20GCA_5F000512335.1_202013-12-19]
45,088 sequences; 567,661,845 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq13853 114 8e-21
seq37662 111 1e-19
seq13717 111 1e-19
seq44944 105 4e-18
seq14479 105 4e-18
seq12168 100 2e-16
seq16149 96.9 2e-15
seq16084 89.7 3e-13
seq15753 89.7 3e-13
seq14446 89.7 3e-13
seq7873 89.7 3e-13
seq15779 84.2 1e-11
>seq13853
Length=43806
Score = 114 bits (126), Expect = 8e-21
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | ||||| ||||||| ||| ||||| ||| ||||| ||||| || ||||
Sbjct 9749 ACCACCACGTAAACGCAACACCAGATGGAGAGTTGACTCCTTTTGAATGTTATAGTCGGC 9690
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| |||||| | || || | || ||||| || ||||||||||||||||| || | ||
Sbjct 9689 CAATGTGCGCCCATCCTCGAGCTGCTTTCCTGCGAAAATCAAACGCTGCTGGTCCGGTGG 9630
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| || || ||| | || | ||| | ||||||||| || |
Sbjct 9629 GATGCCCTCCTTGTCCTGGATCTT-TGTCTTGACGTTGTCGATGGTGTCGCTGCTCTCAA 9571
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || || || || || || |||||||| |||||||||
Sbjct 9570 CCTCGAGAGTGATGGTCTTCCCCGTCAAGGTCTTTACAAAAATCTGCATA 9521
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | ||||| ||||||| ||| ||||| ||| ||||| ||||| || ||||
Sbjct 19789 ACCACCACGTAAACGCAACACCAGATGGAGAGTTGACTCCTTTTGAATGTTATAGTCGGC 19730
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| |||||| | || || | || ||||| || ||||||||||||||||| || | ||
Sbjct 19729 CAATGTGCGCCCATCCTCGAGCTGCTTTCCTGCGAAAATCAAACGCTGCTGGTCCGGTGG 19670
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| || || ||| | || | ||| | ||||||||| || |
Sbjct 19669 GATGCCCTCCTTGTCCTGGATCTT-TGTCTTGACGTTGTCGATGGTGTCGCTGCTCTCAA 19611
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || || || || || || || || || |||||||||
Sbjct 19610 CCTCGAGGGTGATAGTCTTCCCAGTCAAGGTCTTCACGAAAATCTGCATA 19561
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | | ||| || ||||| || | ||| ||| || || ||||| ||||| |
Sbjct 19332 CCACCACGGAGACGCAAGACCAAGTGCAAAGTCGACTCCTTCTGAATGTTATAATCAGCC 19273
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| || || | || || | ||| || ||||||||||||| | |||||||||| | ||
Sbjct 19272 AAAGTACGACCATCCTCAAGTTGCTTCCCGGCAAAAATCAGCCTCTGCTGATCTGGGGGA 19213
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || || || |||||| || | ||||| ||| | ||||||| || ||
Sbjct 19212 ATGCCCTCCTTATCCTGAATTTT-GGTCTTAACATTGTCGATGGTGTCGGAGCTCTCAAC 19154
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||| || ||||| || || || | |||||| || |||||||||||
Sbjct 19153 CTCAAGGGTAATCGTCTTTCCAGTCAGCGTTTTCACGAAGATCTGCAT 19106
Score = 87.8 bits (96), Expect = 1e-12
Identities = 168/243 (69%), Gaps = 10/243 (4%)
Strand=Plus/Minus
Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570
|||||| || ||||| | | ||| | ||||| || || || ||| ||||| |||
Sbjct 18888 AAAATCTGCATCCCACCACGTAGACGAAGAACCAAGTGAAGGGTCGACTCCTTTTGGATG 18829
Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630
|||||||| | | || || |||| || | ||||| || ||||| |||| ||| |||
Sbjct 18828 TTGTAATCAGCCAAAGTACGGCCGTCTTCAAGCTGTTTACCAGCAAAGATCAGACGTTGC 18769
Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689
|| || | || | ||||| ||||| ||||| ||||| |||| ||| | |||||
Sbjct 18768 TGGTCCGGGGGAATTCCTTCCTTGTCTTGGATTTT-TGTTTTGACATTGTCGATCGTGTC 18710
Query 33690 ---GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTG 33746
||| ||| || || | ||||| || || || |||| ||||| || ||||| ||
Sbjct 18709 AGAGCT---TTCGACTTCTAGAGTGATTGTCTTGCCGGTTAGGGTTTTCACGAAGATTTG 18653
Query 33747 CAT 33749
|||
Sbjct 18652 CAT 18650
Score = 84.2 bits (92), Expect = 1e-11
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | | ||| |||||||| || | ||| ||| ||||| || |||||||| |
Sbjct 19104 CCACCACGGAGACGCAACACCAAGTGCAAAGTAGACTCCTTTTGAATATTGTAATCTGCC 19045
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| |||||| |||| || | ||| || || ||||||||||| | ||||| || | ||
Sbjct 19044 AATGTGCGGCCGTCCTCGAGTTGCTTCCCAGCAAAAATCAACCTTTGCTGGTCCGGAGGA 18985
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCA 33700
| ||| || || || ||| || || | ||| | ||| | ||||| | | | || |
Sbjct 18984 ATACCCTCCTTATCCTGAATCTT-AGTCTTAACGTTGTCAATTGTGTC-CGAGCTCTCTA 18927
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | || ||||| ||||| || || || || || || ||||||||
Sbjct 18926 CCTCGAGAGTAATCGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 18878
Score = 82.4 bits (90), Expect = 5e-11
Identities = 167/243 (69%), Gaps = 10/243 (4%)
Strand=Plus/Minus
Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570
|||||| || ||||| | | ||| | ||||| || || || ||| ||||| |||
Sbjct 9306 AAAATCTGCATCCCACCACGTAGACGAAGAACCAAGTGAAGGGTCGACTCCTTTTGGATG 9247
Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630
|||||||| | | || || |||| || | ||||| || ||||| |||| ||| |||
Sbjct 9246 TTGTAATCAGCCAAAGTACGGCCGTCTTCAAGCTGTTTACCAGCAAAGATCAGACGTTGC 9187
Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689
|| || | || | ||||| ||||| ||||| ||||| |||| ||| | |||||
Sbjct 9186 TGGTCCGGGGGAATTCCTTCCTTGTCTTGGATTTT-TGTTTTGACATTGTCGATCGTGTC 9128
Query 33690 ---GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTG 33746
||| ||| || || | ||||| || || | |||| ||||| || ||||| ||
Sbjct 9127 AGAGCT---TTCGACTTCTAGAGTGATTGTCTTGTCGGTTAGGGTTTTCACGAAGATTTG 9071
Query 33747 CAT 33749
|||
Sbjct 9070 CAT 9068
>seq37662
Length=1545
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||||| || |||||||| || || || |||||| || ||||||||||| |
Sbjct 27 ACCACCTCTCAGTCGCAACACCAAGTGGAGCGTAGACTCTTTCTGGATGTTGTAATCAGC 86
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || || |||| || | |||||||| || |||||||| | ||||||||| | ||
Sbjct 87 AAGCGTACGACCGTCCTCAAGCTGTTTTCCCGCGAAAATCAACCTCTGCTGATCAGGAGG 146
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || || || || || | | ||| | ||| | |||||| ||| |
Sbjct 147 GATCCCCTCCTTATCTTGAACCTT-GGACTTAACGTTGTCAATGGTGTCCGAACTTTCAA 205
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | |||||||| || ||||| | |||||| |||||||| ||||||
Sbjct 206 CTTCCAAGGTGATCGTCTTCCCTGTCAGCGTTTTCACAAAGATTTGCATA 255
>seq13717
Length=68558
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | | ||| | |||||| || || || ||| || || |||||||| || | |
Sbjct 35008 CCACCACGGAGACGAAGCACCAAGTGAAGTGTTGACTCCTTCTGGATGTTGTAGTCAGCG 35067
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
||||| || |||| || | ||||||||||| ||||| | ||| || || ||| | ||
Sbjct 35068 AGTGTACGGCCGTCTTCAAGCTGTTTTCCGGCGAAAATGAGACGTTGTTGGTCTGGTGGA 35127
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||| ||||| || || |||| |||| ||| | |||||| ||||| ||
Sbjct 35128 ATGCCTTCCTTGTCTTGGATCTT-GGTTTTCACATTGTCGATGGTGTCTGAGGATTCAAC 35186
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | || ||||| || ||||||| ||||| || |||||||||||
Sbjct 35187 CTCTAGGGTTATCGTCTTCCCTGTTAGGGTTTTCACGAAGATCTGCAT 35234
>seq44944
Length=25146
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| || | ||| ||||||||||| ||||| ||| || || |||||||| ||||
Sbjct 20553 ACCACCCCTGAGACGCAACACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGC 20612
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| | || || | || ||||| ||||| || | | |||||| || | ||
Sbjct 20613 CAGGGTGCGACCATCCTCGAGCTGCTTTCCCGCAAAGATAAGCCTCTGCTGGTCCGGTGG 20672
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||| ||||| ||| ||| || | ||| | ||| | |||||||| || |
Sbjct 20673 GATCCCTTCCTTGTCCTGAATCTTC-GTCTTAACGTTGTCAATCGTGTCGCTGCTCTCAA 20731
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| |||| || || || || || || || || || || ||||||||||||
Sbjct 20732 CCTCAAGGGTAATGGTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCATA 20781
Score = 91.5 bits (100), Expect = 1e-13
Identities = 138/194 (71%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617
||| || || || ||||| |||| | ||||| |||| ||||| || || || |||||
Sbjct 20361 CTCCTTCTGGATATTGTAGTCGGCCAAGGTGCGACCGTCCTCCAACTGCTTCCCCGCAAA 20420
Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677
||||| | |||||| || | || | || || ||||| || || |||| |||
Sbjct 20421 AATCAGCCTCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTAGTCTTCA-CAT 20479
Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736
||| | |||||||| ||||| || | |||||||| || || || ||||| || |
Sbjct 20480 TGTCGATCGTGTCGCTGCTCTCCACTTCCAGGGTGATCGTCTTGCCGGTCAACGTCTTCA 20539
Query 33737 CAAAGATCTGCATA 33750
||||||||||||||
Sbjct 20540 CAAAGATCTGCATA 20553
Score = 84.2 bits (92), Expect = 1e-11
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || ||| | ||||| || || ||| ||| || || |||||||| ||||
Sbjct 21009 ACCACCACGCAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 21068
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| | || || | ||| ||||| ||||| |||| ||| ||||| ||| | ||
Sbjct 21069 AAGAGTGCGGCCATCCTCGAGTTGCTTTCCAGCAAAGATCAGACGTTGCTGGTCTGGGGG 21128
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| ||||| || | || | ||| | ||||| || |
Sbjct 21129 GATGCCCTCCTTGTCTTGGATTTTG-GTCTTGACGTTGTCGATTGTGTCAGAACTCTCTA 21187
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || || || || || || || || ||||||||||||
Sbjct 21188 CCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATA 21237
>seq14479
Length=56811
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| || | ||| ||||||||||| ||||| ||| || || |||||||| ||||
Sbjct 50685 ACCACCCCTGAGACGCAACACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGC 50744
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| | || || | || ||||| ||||| || | | |||||| || | ||
Sbjct 50745 CAGGGTGCGACCATCCTCGAGCTGCTTTCCCGCAAAGATAAGCCTCTGCTGGTCCGGTGG 50804
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||| ||||| ||| ||| || | ||| | ||| | |||||||| || |
Sbjct 50805 GATCCCTTCCTTGTCCTGAATCTTC-GTCTTAACGTTGTCAATCGTGTCGCTGCTCTCAA 50863
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| |||| || || || || || || || || || || ||||||||||||
Sbjct 50864 CCTCAAGGGTAATGGTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCATA 50913
Score = 86.0 bits (94), Expect = 4e-12
Identities = 137/194 (71%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617
||| || || || ||||| |||| | ||||| |||| ||||| || || || |||||
Sbjct 50493 CTCCTTCTGGATATTGTAGTCGGCCAAGGTGCGACCGTCCTCCAACTGCTTCCCAGCAAA 50552
Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677
|||| | |||||| || | || | || || ||||| || || |||| |||
Sbjct 50553 GATCAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTAGTCTTCA-CAT 50611
Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736
||| | |||||||| ||||| || | |||||||| || || || ||||| || |
Sbjct 50612 TGTCGATCGTGTCGCTGCTCTCCACTTCCAGGGTGATCGTCTTGCCGGTCAACGTCTTCA 50671
Query 33737 CAAAGATCTGCATA 33750
||||||||||||||
Sbjct 50672 CAAAGATCTGCATA 50685
Score = 84.2 bits (92), Expect = 1e-11
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || ||| | ||||| || || ||| ||| || || |||||||| ||||
Sbjct 51141 ACCACCACGCAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 51200
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| | || || | ||| ||||| ||||| |||| ||| ||||| ||| | ||
Sbjct 51201 AAGAGTGCGGCCATCCTCGAGTTGCTTTCCAGCAAAGATCAGACGTTGCTGGTCTGGGGG 51260
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| ||||| || | || | ||| | ||||| || |
Sbjct 51261 GATGCCCTCCTTGTCTTGGATTTTG-GTCTTGACGTTGTCGATTGTGTCAGAACTCTCGA 51319
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || || || || || || || || ||||||||||||
Sbjct 51320 CCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATA 51369
>seq12168
Length=30050
Score = 100 bits (110), Expect = 2e-16
Identities = 156/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593
||| ||||||| ||| || || || ||||| |||||||| |||| | || || |
Sbjct 8293 ACGCAACACCAGATGGAGGGTCGATTCCTTTTGAATGTTGTAGTCGGCCAACGTACGACC 8352
Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653
||| || | || ||||| ||||| ||||| | ||| || ||| | || | ||| || ||
Sbjct 8353 GTCCTCGAGCTGCTTTCCAGCAAATATCAATCTCTGTTGGTCTGGGGGGATACCCTCCTT 8412
Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGAT-TCCACGTCAACCGTG 33711
||| |||||| ||| | || | |||| |||||| | | | ||||| || | ||||
Sbjct 8413 GTCCTGAATTTT-TGTCTTGACGTTGTCAATGGTGTC-CGAGCTCTCCACCTCCAGCGTG 8470
Query 33712 ATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
||||| || ||||| || || || | |||||||||||
Sbjct 8471 ATCGTCTTTCCTGTCAAAGTCTTCAAGAAGATCTGCAT 8508
>seq16149
Length=224952
Score = 96.9 bits (106), Expect = 2e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618
|| || || |||||||| |||| |||||| || |||| || | ||||||||||| ||
Sbjct 103653 TCCTTCTGGATGTTGTAGTCGGCGAGTGTACGGCCGTCTTCAAGCTGTTTTCCGGCGAAG 103594
Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678
|| | ||| || || || | || | ||||| ||||| |||||| || | ||||
Sbjct 103593 ATGAGACGTTGTTGGTCGGGAGGGATGCCTTCCTTGTCTTGAATTTT-GGTCTTCACATT 103535
Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737
||| | ||||||| ||||| || || | || ||||| || || |||| ||||| ||
Sbjct 103534 GTCGATGGTGTCGGAGGATTCAACCTCCAATGTTATCGTCTTCCCCGTTAGGGTTTTCAC 103475
Query 33738 AAAGATCTGCAT 33749
|| ||||||||
Sbjct 103474 GAATATCTGCAT 103463
>seq16084
Length=201933
Score = 89.7 bits (98), Expect = 3e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||||| || |||||||| || || || |||||| || ||||||||||| |
Sbjct 157 ACCACCTCTCAGTCGCAACACCAAGTGGAGCGTAGACTCTTTCTGGATGTTGTAATCAGC 98
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATC 33635
|| || || |||| || | |||||||| || |||||||| | |||||||||
Sbjct 97 AAGCGTACGACCGTCCTCAAGCTGTTTTCCCGCGAAAATCAACCTCTGCTGATC 44
>seq15753
Length=130878
Score = 89.7 bits (98), Expect = 3e-13
Identities = 143/200 (72%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593
||| ||||||||||| || || || ||||| |||||||| |||| | || || |
Sbjct 123935 ACGCAACACCAAATGGAGGGTCGATTCCTTTTGAATGTTGTAGTCGGCCAACGTACGACC 123994
Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653
||| || | || ||||| ||||| ||||| | ||| || ||| | || | ||| | ||
Sbjct 123995 GTCTTCGAGCTGCTTTCCAGCAAATATCAATCTCTGTTGGTCTGGAGGGATACCCCCCTT 124054
Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCACGTCAACCGTG 33711
||| | |||||| ||| | || | ||| | |||||| | | | ||||| || | ||||
Sbjct 124055 GTCCGGAATTTT-TGTCTTGACGTTGTCAATGGTGTC-CGAGCTCTCCACCTCTAGCGTG 124112
Query 33712 ATCGTTTTACCTGTTAACGT 33731
||||| || ||||| || ||
Sbjct 124113 ATCGTCTTTCCTGTCAAAGT 124132
>seq14446
Length=62709
Score = 89.7 bits (98), Expect = 3e-13
Identities = 166/240 (69%), Gaps = 4/240 (2%)
Strand=Plus/Plus
Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570
|||||| || ||||| || | ||| ||||||||||| || || ||| || || ||
Sbjct 47576 AAAATCTGCATGCCACCCCTGAGACGCAACACCAAATGGAGGGTCGACTCCTTCTGGATA 47635
Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630
|| || || | | || || |||| || | ||||| |||||||| ||||| | |||
Sbjct 47636 TTATAGTCTGCCAAAGTACGGCCGTCCTCGAGCTGTTTCCCGGCAAAGATCAACCTTTGC 47695
Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689
|| ||| | || | || || ||||| || || ||| | |||| ||| | |||||
Sbjct 47696 TGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTT-TGTCTTGACATTGTCAATCGTGTC 47754
Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
||| || || |||| || || || || || || || || || ||||||||||||||
Sbjct 47755 GCTGCTCTCAACCTCAAGGGTAATGGTCTTTCCAGTCAAGGTCTTGACAAAGATCTGCAT 47814
>seq7873
Length=9932
Score = 89.7 bits (98), Expect = 3e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||||| || |||||||| || || || |||||| || ||||||||||| |
Sbjct 26 ACCACCTCTCAGTCGCAACACCAAGTGGAGCGTAGACTCTTTCTGGATGTTGTAATCAGC 85
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATC 33635
|| || || |||| || | |||||||| || |||||||| | |||||||||
Sbjct 86 AAGCGTACGACCGTCCTCAAGCTGTTTTCCCGCGAAAATCAACCTCTGCTGATC 139
>seq15779
Length=145502
Score = 84.2 bits (92), Expect = 1e-11
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | ||||| || || || ||| || || |||||||| || |
Sbjct 122155 ACCACCACGAAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGC 122096
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| ||||| | || || | ||||| || ||||| |||| | |||||| || | ||
Sbjct 122095 CAACGTGCGCCCATCCTCGAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCCGGAGG 122036
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| || ||||| ||||| || | || | ||| | ||||| || || |
Sbjct 122035 GATACCCTCCTTGTCCTGGATTTTA-GTCTTGACGTTGTCGATCGTGTCACTGCTCTCGA 121977
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| |||| ||||| || || |||||||| || || |||||||||||||||
Sbjct 121976 CCTCAAGGGTGATGGTCTTCCCTGTTAAGGTCTTAACAAAGATCTGCATA 121927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328523373864960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |